Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0169 Papaver somniferum HOM05D008529 ORTHO05D010219 1.2e-158 563.1 295 100.0
PSO541G3973 Papaver somniferum HOM05D008529 ORTHO05D010219 3.6e-158 561.6 295 99.7
PSO675G7323 Papaver somniferum HOM05D008529 ORTHO05D010219 3.6e-158 561.6 295 99.7
PSO761G0228 Papaver somniferum HOM05D008529 ORTHO05D010219 7.9e-158 560.5 295 99.3
PSO017G2861 Papaver somniferum HOM05D008529 ORTHO05D010219 3.0e-157 558.5 295 99.3
PSO210G0056 Papaver somniferum HOM05D008529 ORTHO05D010219 3.0e-157 558.5 295 99.3
PSO541G6160 Papaver somniferum HOM05D008529 ORTHO05D010219 3.0e-157 558.5 295 99.3
PSO832G3163 Papaver somniferum HOM05D008529 ORTHO05D010219 3.0e-157 558.5 295 99.3
PSO063G4627 Papaver somniferum HOM05D008529 ORTHO05D010219 5.1e-157 557.8 295 99.0
PSO210G5199 Papaver somniferum HOM05D008529 ORTHO05D010219 6.7e-157 557.4 295 99.0
PSO210G2338 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-156 556.6 295 99.0
PSO384G0405 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-156 556.6 295 99.0
PSO478G2872 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-156 556.6 295 99.0
PSO782G5516 Papaver somniferum HOM05D008529 ORTHO05D010219 4.3e-156 554.7 295 98.6
PSO170G2488 Papaver somniferum HOM05D008529 ORTHO05D010219 1.7e-155 552.7 295 98.3
PSO675G5337 Papaver somniferum HOM05D008529 ORTHO05D010219 2.9e-152 542.0 302 95.4
PSO017G2108 Papaver somniferum HOM05D008529 ORTHO05D010219 5.0e-152 541.2 295 96.6
PSO063G7383 Papaver somniferum HOM05D008529 ORTHO05D010219 5.5e-151 537.7 291 96.9
PSO423G0120 Papaver somniferum HOM05D008529 ORTHO05D010219 3.9e-149 531.6 281 99.6
PSO384G0957 Papaver somniferum HOM05D008529 ORTHO05D010219 5.1e-149 531.2 306 92.8
PSO063G3962 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-148 530.0 306 92.8
PSO339G5611 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-148 530.0 306 92.8
PSO478G1972 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-148 530.0 306 92.8
PSO700G0127 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-148 530.0 306 92.8
PSO832G0739 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-148 530.0 306 92.8
PSO461G0058 Papaver somniferum HOM05D008529 ORTHO05D010219 2.6e-148 528.9 306 92.5
PSO384G4383 Papaver somniferum HOM05D008529 ORTHO05D010219 3.3e-148 528.5 306 92.5
PSO541G2562 Papaver somniferum HOM05D008529 ORTHO05D010219 4.4e-148 528.1 306 92.5
PSO461G0064 Papaver somniferum HOM05D008529 ORTHO05D010219 1.3e-147 526.6 306 92.2
PSO133G0069 Papaver somniferum HOM05D008529 ORTHO05D010219 1.7e-147 526.2 306 92.2
PSO384G4172 Papaver somniferum HOM05D008529 ORTHO05D010219 3.7e-147 525.0 306 91.8
PSO210G6697 Papaver somniferum HOM05D008529 ORTHO05D010219 2.4e-146 522.3 302 92.1
PSO478G4936 Papaver somniferum HOM05D008529 ORTHO05D010219 3.1e-146 521.9 274 99.3
PSO386G0005 Papaver somniferum HOM05D008529 ORTHO05D010219 1.7e-144 516.2 272 99.3
PSO541G0799 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-143 512.3 295 92.5
PSO063G5131 Papaver somniferum HOM05D008529 ORTHO05D010219 8.0e-126 454.1 238 98.3
PSO724G0644 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-111 407.1 208 99.0
PSO017G3549 Papaver somniferum HOM05D008529 ORTHO05D010219 8.9e-109 397.5 209 96.2
PSO761G0531 Papaver somniferum HOM05D008529 ORTHO05D010219 1.2e-102 377.1 190 99.5
PSO761G0474 Papaver somniferum HOM05D008529 ORTHO05D010219 6.2e-102 374.8 190 98.9
PSO339G4421 Papaver somniferum HOM05D008529 ORTHO05D010219 3.4e-100 369.0 187 98.9
PSO732G0541 Papaver somniferum HOM05D008529 ORTHO05D010219 5.2e-93 345.1 173 98.3
PSO478G4463 Papaver somniferum HOM05D008529 ORTHO05D010219 1.4e-74 283.9 181 82.3
PSO170G6704 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-71 274.2 155 98.7
PSO423G0183 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-71 274.2 155 98.7
PSO675G1768 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-71 274.2 155 98.7
PSO801G0719 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-71 274.2 155 98.7
PSO017G1082 Papaver somniferum HOM05D008529 ORTHO05D010219 8.7e-64 248.1 166 87.3
PSO170G6734 Papaver somniferum HOM05D008529 ORTHO05D010219 4.2e-58 229.2 113 98.2
PSO541G0326 Papaver somniferum HOM05D008529 ORTHO05D010219 3.5e-57 226.1 110 99.1
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.1e-17 94.0 301 27.6
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.1e-17 94.0 301 27.6
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.7e-17 92.8 301 27.2
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.7e-17 92.8 301 27.6
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 6.1e-17 92.4 301 27.2
RcHm_v2.0_Chr6g0260681 Rosa chinensis HOM05D008529 ORTHO05D010219 8.8e-16 88.6 304 27.6
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.2e-15 88.2 301 26.9
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 9.7e-15 85.1 298 27.2
FAN09G3614 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.1e-13 81.6 310 27.4
CiPaw.14G121300 Carya illinoinensis HOM05D001576 ORTHO05D010219 3.1e-13 80.1 299 26.4
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 9.1e-13 78.6 301 25.9
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 9.1e-13 78.6 301 25.9
Rhsim03G0135600 Rhododendron simsii HOM05D001576 ORTHO05D010219 1.2e-12 78.2 290 27.6
CSS0032344 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 3.5e-12 76.6 301 26.9
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 5.9e-12 75.9 287 25.8
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.9e-12 75.9 307 25.7
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 2.9e-11 73.6 290 24.5
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.5e-11 72.0 307 25.4
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.5e-11 72.0 307 25.4
CSS0013406 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 1.1e-10 71.6 301 26.2
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 2.1e-09 67.4 302 23.8
FAN08G2536 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.7e-09 66.2 275 25.8
CiPaw.03G043000 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.1e-09 65.9 129 29.5
CiPaw.07G052000 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.1e-09 65.9 129 29.5
CiPaw.08G044500 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.1e-09 65.9 129 29.5
CiPaw.10G012800 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.1e-09 65.9 129 29.5
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.0e-09 65.5 303 25.7
CSS0004599 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.0e-08 65.1 295 24.1
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 1.0e-08 65.1 294 25.2
CiPaw.07G099700 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-08 64.3 306 24.8
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 1.8e-08 64.3 299 25.8
CiPaw.05G126800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.3e-08 63.9 295 23.1
FvH4_4g12912 Fragaria vesca HOM05D007743 ORTHO05D004645 2.3e-08 63.9 292 24.0
FvH4_2g00671 Fragaria vesca HOM05D007743 ORTHO05D004645 3.0e-08 63.5 236 26.7
Atru.chr5.2435 Acer truncatum HOM05D007743 ORTHO05D004645 5.2e-08 62.8 295 23.1
FvH4_3g23932 Fragaria vesca HOM05D011010 ORTHO05D012519 5.2e-08 62.8 302 23.2
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.2e-08 62.8 298 22.8
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.2e-08 62.8 298 22.8
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 6.8e-08 62.4 307 26.1
CiPaw.03G181800 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.8e-08 62.0 295 24.7
QL02p093127 Quercus lobata HOM05D001576 ORTHO05D000401 8.8e-08 62.0 304 24.7
Zm00001eb283200 Zea mays HOM05D000011 ORTHO05D000157 1.2e-07 61.6 288 24.0
CSS0031528 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-07 61.2 124 29.8
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 1.5e-07 61.2 124 28.2
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 1.5e-07 61.2 124 28.2
CSS0014176 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D010219 2.0e-07 60.8 124 29.0
CSS0047725 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 123 30.1
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 300 23.3
Os12g0169300 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 2.0e-07 60.8 300 24.3
Os12g0228500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 2.0e-07 60.8 300 24.3
Rhsim13G0212700 Rhododendron simsii HOM05D002367 ORTHO05D011821 2.0e-07 60.8 203 27.6
RcHm_v2.0_Chr5g0049061 Rosa chinensis HOM05D007743 ORTHO05D010219 2.0e-07 60.8 89 33.7
CSS0004943 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.4e-07 60.1 124 29.8
FvH4_3g35672 Fragaria vesca HOM05D011010 ORTHO05D012519 3.4e-07 60.1 296 21.6
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.4e-07 60.1 296 23.3
vmacro04017 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 3.4e-07 60.1 252 26.6
CARHR029530 Cardamine hirsuta HOM05D007592 ORTHO05D004645 4.4e-07 59.7 307 25.4
CiPaw.01G092600 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.4e-07 59.7 129 27.9
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.4e-07 59.7 301 22.6
CiPaw.08G115400 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.4e-07 59.7 129 28.7
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.4e-07 59.7 301 22.6
CiPaw.09G172800 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.4e-07 59.7 302 25.5
FAN03G2119 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.4e-07 59.7 299 25.1
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 4.4e-07 59.7 305 23.3
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.7e-07 59.3 209 23.4
Potri.010G014250 Populus trichocarpa HOM05D001576 ORTHO05D010219 7.5e-07 58.9 124 27.4
Atru.chr1.3225 Acer truncatum HOM05D001576 ORTHO05D010219 9.8e-07 58.5 93 33.3
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 9.8e-07 58.5 297 23.2
FvH4_1g29461 Fragaria vesca HOM05D007743 ORTHO05D010219 9.8e-07 58.5 214 27.1
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.3e-06 58.2 294 23.5
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.3e-06 58.2 294 23.5
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.3e-06 58.2 294 23.5
CiPaw.14G031000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.3e-06 58.2 294 23.8
CiPaw.14G032300 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.3e-06 58.2 156 25.6
CiPaw.15G112900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.3e-06 58.2 293 25.3
Os06g0635500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.3e-06 58.2 191 26.2
Rhsim01G0133600 Rhododendron simsii HOM05D001576 ORTHO05D010219 1.3e-06 58.2 252 25.8
RcHm_v2.0_Chr2g0144051 Rosa chinensis HOM05D007743 ORTHO05D010219 1.3e-06 58.2 89 32.6
FvH4_7g00330 Fragaria vesca HOM05D003861 ORTHO05D003172 1.7e-06 57.8 293 23.9
Manes.13G090650 Manihot esculenta HOM05D007592 ORTHO05D004645 1.7e-06 57.8 301 23.3
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-06 57.4 294 23.5
Rhsim09G0056800 Rhododendron simsii HOM05D001576 ORTHO05D010219 2.2e-06 57.4 239 23.8
Aqoxy1G02949 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 2.8e-06 57.0 162 24.1
CiPaw.14G032000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.8e-06 57.0 304 25.3
FAN04G2392 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.8e-06 57.0 152 30.9
Manes.12G071166 Manihot esculenta HOM05D007743 ORTHO05D010219 2.8e-06 57.0 138 26.8
Manes.15G155750 Manihot esculenta HOM05D007743 ORTHO05D010219 2.8e-06 57.0 126 27.0
Rhsim04G0125600 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.8e-06 57.0 296 23.0
TWI23G0314 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.8e-06 57.0 288 24.0
Aqoxy3G02110 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 3.7e-06 56.6 162 24.1
PSO339G5938 Papaver somniferum HOM05D019271 ORTHO05D013620 3.7e-06 56.6 163 23.9
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.8e-06 56.2 290 22.4
CiPaw.13G129900 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.8e-06 56.2 310 24.2
RcHm_v2.0_Chr6g0298551 Rosa chinensis HOM05D011010 ORTHO05D012519 6.3e-06 55.8 296 22.3
CiPaw.02G131900 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.3e-06 55.5 152 27.0
CiPaw.07G048000 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.3e-06 55.5 325 22.8
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 8.3e-06 55.5 249 24.5
FAN03G2899 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.3e-06 55.5 293 22.5
Manes.14G157656 Manihot esculenta HOM05D007743 ORTHO05D010219 8.3e-06 55.5 134 26.9
QL05p011416 Quercus lobata HOM05D001576 ORTHO05D016378 8.3e-06 55.5 218 22.5
QL10p048988 Quercus lobata HOM05D001576 ORTHO05D000401 8.3e-06 55.5 291 23.4


User provided reference genes

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