Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0163 Papaver somniferum HOM05D002173 ORTHO05D002189 4.2e-86 321.2 153 100.0
PSO675G6517 Papaver somniferum HOM05D002173 ORTHO05D002189 2.9e-47 192.2 147 65.3
PSO541G4510 Papaver somniferum HOM05D002173 ORTHO05D002189 8.0e-45 184.1 160 58.8
Sp6g38770 Schrenkiella parvula HOM05D002173 ORTHO05D002189 2.6e-11 72.8 142 31.7
VMungo1383G2459 Vigna mungo HOM05D002173 ORTHO05D002189 2.6e-11 72.8 140 34.3
MBI13_g41462_MAGBIO Magnolia biondii HOM05D002173 ORTHO05D002189 2.2e-10 69.7 112 36.6
MBI13_g45471_MAGBIO Magnolia biondii HOM05D002173 ORTHO05D002189 2.2e-10 69.7 112 36.6
THA.LOC104816399 Tarenaya hassleriana HOM05D002173 ORTHO05D002189 2.9e-10 69.3 142 29.6
Thecc.03G248700 Theobroma cacao HOM05D002173 ORTHO05D002189 3.8e-10 68.9 105 30.5
Phvul.001G128400 Phaseolus vulgaris HOM05D002173 ORTHO05D002189 4.9e-10 68.6 140 33.6
BcaC06g32101 Brassica carinata HOM05D002173 ORTHO05D002189 1.1e-09 67.4 125 32.0
C09p72860 Brassica napus HOM05D002173 ORTHO05D002189 1.1e-09 67.4 125 32.0
BolC9t60022H Brassica oleracea HOM05D002173 ORTHO05D002189 1.1e-09 67.4 125 32.0
Ca_14295_v3 Cicer arietinum L. HOM05D002173 ORTHO05D002189 3.2e-09 65.9 137 34.3
Duzib205G1193 Durio zibethinus HOM05D002173 ORTHO05D002189 3.2e-09 65.9 152 28.3
SGA_v2.0_scaffold119G32788 Striga asiatica HOM05D002173 ORTHO05D002189 3.2e-09 65.9 122 35.2
A10p32130 Brassica napus HOM05D002173 ORTHO05D002189 5.4e-09 65.1 104 34.6
BraA10t45256Z Brassica rapa HOM05D002173 ORTHO05D002189 5.4e-09 65.1 104 34.6
CANSAT80G0648 Cannabis sativa HOM05D002173 ORTHO05D002189 5.4e-09 65.1 125 32.0
CANSAT80G1665 Cannabis sativa HOM05D002173 ORTHO05D002189 5.4e-09 65.1 125 32.0
Gohir.D10G254000 Gossypium hirsutum HOM05D002173 ORTHO05D002189 5.4e-09 65.1 99 35.4
Gorai.011G295000 Gossypium raimondii HOM05D002173 ORTHO05D002189 5.4e-09 65.1 99 35.4
RcHm_v2.0_Chr3g0484321 Rosa chinensis HOM05D002173 ORTHO05D002189 5.4e-09 65.1 100 35.0
Gohir.A10G242000 Gossypium hirsutum HOM05D002173 ORTHO05D002189 7.1e-09 64.7 99 34.3
Manes.04G163500 Manihot esculenta HOM05D002173 ORTHO05D002189 7.1e-09 64.7 94 36.2
Solyc01g068170.3 Solanum lycopersicum HOM05D002173 ORTHO05D002189 7.1e-09 64.7 102 36.3
Sopen01g030110 Solanum pennellii HOM05D002173 ORTHO05D002189 7.1e-09 64.7 102 36.3
Potri.016G042400 Populus trichocarpa HOM05D002173 ORTHO05D002189 9.2e-09 64.3 104 35.6
Sabra16G0047900 Salix brachista HOM05D002173 ORTHO05D002189 9.2e-09 64.3 104 34.6
FvH4_6g24740 Fragaria vesca HOM05D002173 ORTHO05D002189 1.2e-08 63.9 100 35.0
FAN14G1603 Fragaria x ananassa HOM05D002173 ORTHO05D002189 1.2e-08 63.9 100 35.0
QL07p005240 Quercus lobata HOM05D002173 ORTHO05D002189 1.2e-08 63.9 141 29.8
MD10G1269800 Malus domestica HOM05D002173 ORTHO05D002189 1.6e-08 63.5 102 35.3
Gorai.007G182100 Gossypium raimondii HOM05D002173 ORTHO05D002189 2.1e-08 63.2 130 33.1
Potri.006G045900 Populus trichocarpa HOM05D002173 ORTHO05D002189 2.1e-08 63.2 133 30.8
FAN02G1189 Fragaria x ananassa HOM05D002173 ORTHO05D002189 2.7e-08 62.8 100 35.0
CANSAT80G2767 Cannabis sativa HOM05D002173 ORTHO05D002189 3.5e-08 62.4 100 35.0
CiPaw.14G005100 Carya illinoinensis HOM05D002173 ORTHO05D002189 3.5e-08 62.4 137 32.1
MD10G1269900 Malus domestica HOM05D002173 ORTHO05D002189 3.5e-08 62.4 102 35.3
BcaC01g02591 Brassica carinata HOM05D002173 ORTHO05D002189 4.6e-08 62.0 126 31.0
Haze_19746 Corylus avellana HOM05D002173 ORTHO05D002189 4.6e-08 62.0 139 30.2
FAN09G4735 Fragaria x ananassa HOM05D002173 ORTHO05D002189 4.6e-08 62.0 99 34.3
Gorai.003G173500 Gossypium raimondii HOM05D002173 ORTHO05D002189 4.6e-08 62.0 129 32.6
QL04p012417 Quercus lobata HOM05D002173 ORTHO05D002189 4.6e-08 62.0 93 37.6
RcHm_v2.0_Chr1g0319371 Rosa chinensis HOM05D002173 ORTHO05D002189 4.6e-08 62.0 121 33.9
Dinv30304 Davidia involucrata HOM05D002173 ORTHO05D002189 6.0e-08 61.6 135 31.9
Dinv39677 Davidia involucrata HOM05D002173 ORTHO05D002189 6.0e-08 61.6 135 31.9
FAN03G0241 Fragaria x ananassa HOM05D002173 ORTHO05D002189 6.0e-08 61.6 112 33.9
Prupe.7G050400 Prunus persica HOM05D002173 ORTHO05D002189 6.0e-08 61.6 140 27.9
Glyma.04G142100 Glycine max HOM05D002173 ORTHO05D002189 7.8e-08 61.2 93 35.5
FvH4_7g02130 Fragaria vesca HOM05D002173 ORTHO05D002189 1.0e-07 60.8 112 33.0
FAN06G0642 Fragaria x ananassa HOM05D002173 ORTHO05D002189 1.0e-07 60.8 112 33.0
Hma1.2p1_0579F.1_g182700 Hydrangea macrophylla HOM05D002173 ORTHO05D002189 1.3e-07 60.5 110 30.9
unitig_26.g8824 Utricularia gibba HOM05D002173 ORTHO05D002189 1.3e-07 60.5 108 37.0
CANSAT80G2573 Cannabis sativa HOM05D002173 ORTHO05D002189 1.7e-07 60.1 108 33.3
Oeu027350.1 Olea europaea HOM05D002173 ORTHO05D002189 1.7e-07 60.1 124 35.5
FAN05G4205 Fragaria x ananassa HOM05D002173 ORTHO05D002189 2.3e-07 59.7 100 34.0
Glyma.03G132800 Glycine max HOM05D002173 ORTHO05D002189 2.3e-07 59.7 103 31.1
Glyma.19G134600 Glycine max HOM05D002173 ORTHO05D002189 2.3e-07 59.7 103 32.0
Psat3g075080 Pisum sativum HOM05D002173 ORTHO05D002189 2.3e-07 59.7 143 28.0
TAR633G0304 Trochodendron aralioides HOM05D002173 ORTHO05D002189 3.0e-07 59.3 134 30.6
FAN10G4218 Fragaria x ananassa HOM05D002173 ORTHO05D002189 3.9e-07 58.9 125 32.8
Gohir.D03G164233 Gossypium hirsutum HOM05D002173 ORTHO05D002189 3.9e-07 58.9 105 32.4
QL04p013053 Quercus lobata HOM05D002173 ORTHO05D002189 3.9e-07 58.9 99 35.4
PGSC0003DMG400006821 Solanum tuberosum HOM05D002173 ORTHO05D002189 5.1e-07 58.5 99 33.3
CANSAT80G0152 Cannabis sativa HOM05D002173 ORTHO05D002189 6.6e-07 58.2 121 30.6
Lj3g0016127 Lotus japonicus HOM05D002173 ORTHO05D002189 6.6e-07 58.2 92 34.8
MD02G1297200 Malus domestica HOM05D002173 ORTHO05D002189 6.6e-07 58.2 99 33.3
QL04p013027 Quercus lobata HOM05D002173 ORTHO05D002189 6.6e-07 58.2 93 37.6
SalBow5G2690 Salvia bowleyana HOM05D002173 ORTHO05D002189 6.6e-07 58.2 108 34.3
CANSAT80G1670 Cannabis sativa HOM05D002173 ORTHO05D002189 8.6e-07 57.8 108 30.6
QL04p012430 Quercus lobata HOM05D002173 ORTHO05D002189 8.6e-07 57.8 99 34.3
VMungo1080G1065 Vigna mungo HOM05D002173 ORTHO05D002189 8.6e-07 57.8 93 33.3
Ciclev10033410m.g Citrus clementina HOM05D002173 ORTHO05D002189 1.5e-06 57.0 93 33.3
GSVIVG01033550001 Vitis vinifera HOM05D002173 ORTHO05D002189 2.5e-06 56.2 134 29.9
Peaxi162Scf00087g00125 Petunia axillaris HOM05D002173 ORTHO05D002189 3.3e-06 55.8 104 35.6
Atru.chr1.1188 Acer truncatum HOM05D002173 ORTHO05D002189 4.3e-06 55.5 138 29.7
Aa31LG1G21330 Aethionema arabicum HOM05D002173 ORTHO05D002189 4.3e-06 55.5 100 32.0
MD12G1086400 Malus domestica HOM05D002173 ORTHO05D002189 4.3e-06 55.5 127 31.5
Actinidia21530 Actinidia chinensis HOM05D002173 ORTHO05D002189 5.6e-06 55.1 107 29.9
Atru.chr11.2562 Acer truncatum HOM05D002173 ORTHO05D002189 7.3e-06 54.7 93 32.3


User provided reference genes

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