Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO528G0269 Papaver somniferum HOM05D002903 ORTHO05D003066 1.2e-203 713.0 384 100.0
PSO170G2097 Papaver somniferum HOM05D002903 ORTHO05D003066 1.3e-165 586.6 391 86.2
Aqoxy5G02305 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 1.9e-18 97.8 272 33.8
Nn5g28499 Nelumbo nucifera HOM05D002903 ORTHO05D003066 3.2e-18 97.1 287 32.4
TAR625G1102 Trochodendron aralioides HOM05D002903 ORTHO05D003066 1.2e-17 95.1 282 34.0
Eucgr.F02770 Eucalyptus grandis HOM05D002903 ORTHO05D003066 8.8e-16 89.0 255 32.2
MBI03_g20844_MAGBIO Magnolia biondii HOM05D002903 ORTHO05D003066 2.0e-15 87.8 231 32.5
ClCG08G006250 Citrullus lanatus HOM05D002903 ORTHO05D003066 3.3e-15 87.0 199 36.7
Nn1g06302 Nelumbo nucifera HOM05D002903 ORTHO05D003066 4.4e-15 86.7 271 33.9
CsaV3_6G031200 Cucumis sativus L. HOM05D002903 ORTHO05D003066 7.4e-15 85.9 256 33.6
Cc10_g13350 Coffea canephora HOM05D002903 ORTHO05D003066 1.7e-14 84.7 286 30.4
Gorai.013G109100 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.7e-14 84.7 200 35.0
Gohir.D03G062500 Gossypium hirsutum HOM05D002903 ORTHO05D003066 3.7e-14 83.6 200 35.0
Thecc.08G137400 Theobroma cacao HOM05D002903 ORTHO05D003066 3.7e-14 83.6 253 33.6
Lj7P356T43 Lonicera japonica HOM05D002903 ORTHO05D003066 8.2e-14 82.4 273 31.5
MELO3C008433.2 Cucumis melo HOM05D002903 ORTHO05D003066 1.1e-13 82.0 256 32.4
Gohir.A02G112000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.8e-13 81.3 200 33.5
Duzib041G0628 Durio zibethinus HOM05D002903 ORTHO05D003066 2.4e-13 80.9 227 34.4
Hma1.2p1_1125F.1_g259580 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 2.4e-13 80.9 261 32.2
Sabra02G0058900 Salix brachista HOM05D002903 ORTHO05D003066 4.1e-13 80.1 257 31.1
Manes.02G172300 Manihot esculenta HOM05D002903 ORTHO05D003066 5.3e-13 79.7 234 31.6
FAN20G1459 Fragaria x ananassa HOM05D002903 ORTHO05D003066 9.1e-13 79.0 251 31.9
CSS0044741 Camellia sinensis var. sinensis HOM05D002903 ORTHO05D003066 1.2e-12 78.6 286 29.4
Dinv41151 Davidia involucrata HOM05D002903 ORTHO05D003066 1.2e-12 78.6 247 30.4
Peaxi162Scf00505g00053 Petunia axillaris HOM05D002903 ORTHO05D003066 1.2e-12 78.6 268 32.1
Haze_17666 Corylus avellana HOM05D002903 ORTHO05D003066 1.6e-12 78.2 174 36.2
Sabra05G0141500 Salix brachista HOM05D002903 ORTHO05D003066 4.5e-12 76.6 270 29.3
Dinv25773 Davidia involucrata HOM05D002903 ORTHO05D003066 1.0e-11 75.5 260 31.9
Gohir.A05G240200 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.0e-11 75.5 166 35.5
Potri.002G075400 Populus trichocarpa HOM05D002903 ORTHO05D003066 1.3e-11 75.1 237 30.4
FAN24G3523 Fragaria x ananassa HOM05D002903 ORTHO05D003066 1.7e-11 74.7 252 29.0
Oeu045975.1 Olea europaea HOM05D002903 ORTHO05D003066 1.7e-11 74.7 227 33.9
COL.COLO4_38160 Corchorus olitorius HOM05D002903 ORTHO05D003066 2.2e-11 74.3 233 33.5
FAN27G1654 Fragaria x ananassa HOM05D002903 ORTHO05D003066 2.2e-11 74.3 277 30.0
Glyma.14G158800 Glycine max HOM05D002903 ORTHO05D003066 2.2e-11 74.3 230 30.4
Gohir.D02G076000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 2.2e-11 74.3 293 31.1
Gorai.005G085300 Gossypium raimondii HOM05D002903 ORTHO05D003066 2.2e-11 74.3 293 31.1
Cfa018400 Carpinus fangiana HOM05D002903 ORTHO05D003066 2.9e-11 73.9 219 31.5
RcHm_v2.0_Chr6g0278041 Rosa chinensis HOM05D002903 ORTHO05D003066 2.9e-11 73.9 284 30.3
FvH4_2g15290 Fragaria vesca HOM05D002903 ORTHO05D003066 3.8e-11 73.6 252 28.6
Solyc06g059860.3 Solanum lycopersicum HOM05D002903 ORTHO05D003066 3.8e-11 73.6 246 30.9
vmacro00875 Vaccinium macrocarpon HOM05D002903 ORTHO05D003066 3.8e-11 73.6 188 31.9
TWI60G0469 Tripterygium wilfordii HOM05D002903 ORTHO05D003066 5.0e-11 73.2 171 34.5
Aqoxy6G00279 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 6.5e-11 72.8 263 31.6
TAR376G0422 Trochodendron aralioides HOM05D002903 ORTHO05D003066 8.5e-11 72.4 246 32.5
MD05G1009200 Malus domestica HOM05D002903 ORTHO05D003066 1.1e-10 72.0 302 32.5
Lalb_Chr10g0101441 Lupinus albus HOM05D002903 ORTHO05D003066 1.5e-10 71.6 227 29.1
Duzib093G1863 Durio zibethinus HOM05D002903 ORTHO05D003066 1.9e-10 71.2 254 30.3
Glyma.13G036100 Glycine max HOM05D002903 ORTHO05D003066 1.9e-10 71.2 259 31.3
Lalb_Chr08g0240931 Lupinus albus HOM05D002903 ORTHO05D003066 1.9e-10 71.2 232 30.2
PGR044G0841 Punica granatum HOM05D002903 ORTHO05D003066 1.9e-10 71.2 262 30.2
QL09p029695 Quercus lobata HOM05D002903 ORTHO05D003066 1.9e-10 71.2 269 29.4
VMungo1309G2413 Vigna mungo HOM05D002903 ORTHO05D003066 1.9e-10 71.2 224 29.9
CSS0044801 Camellia sinensis var. sinensis HOM05D002903 ORTHO05D003066 2.5e-10 70.9 191 34.0
CiPaw.15G024600 Carya illinoinensis HOM05D002903 ORTHO05D003066 2.5e-10 70.9 237 30.0
CiPaw.16G019600 Carya illinoinensis HOM05D002903 ORTHO05D003066 2.5e-10 70.9 239 28.9
Medtr1g029550 Medicago truncatula HOM05D002903 ORTHO05D003066 2.5e-10 70.9 282 28.7
Nitab4.5_0002270g0020 Nicotiana tabacum HOM05D002903 ORTHO05D003066 2.5e-10 70.9 251 29.5
Sed0005775 Sechium edule HOM05D002903 ORTHO05D003066 2.5e-10 70.9 203 33.0
GSVIVG01022345001 Vitis vinifera HOM05D002903 ORTHO05D003066 2.5e-10 70.9 285 29.1
MSTRG.1394 Avicennia marina HOM05D002903 ORTHO05D003066 4.2e-10 70.1 316 28.2
FAN15G2216 Fragaria x ananassa HOM05D002903 ORTHO05D003066 4.2e-10 70.1 252 29.4
Oeu001551.1 Olea europaea HOM05D002903 ORTHO05D003066 4.2e-10 70.1 229 30.1
Ca_16630_v3 Cicer arietinum L. HOM05D002903 ORTHO05D003066 7.2e-10 69.3 173 32.4
Glyma.04G243500 Glycine max HOM05D002903 ORTHO05D003066 7.2e-10 69.3 196 32.7
Aqoxy1G01928 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 9.4e-10 68.9 95 41.1
Gohir.D05G241400 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.2e-09 68.6 226 32.3
Gorai.009G250800 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.6e-09 68.2 219 32.9
MD10G1007900 Malus domestica HOM05D002903 ORTHO05D003066 1.6e-09 68.2 250 31.6
MSTRG.24179 Avicennia marina HOM05D002903 ORTHO05D003066 2.1e-09 67.8 295 29.5
Manes.18G084700 Manihot esculenta HOM05D002903 ORTHO05D003066 2.7e-09 67.4 226 29.6
Migut.N03253 Erythranthe guttata HOM05D002903 ORTHO05D003066 4.7e-09 66.6 200 32.0
Phvul.001G065100 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 4.7e-09 66.6 255 33.7
QL10p043057 Quercus lobata HOM05D002903 ORTHO05D003066 4.7e-09 66.6 223 34.1
Sopen06g019940 Solanum pennellii HOM05D002903 ORTHO05D003066 6.1e-09 66.2 234 29.9
Oeu058296.1 Olea europaea HOM05D002903 ORTHO05D003066 8.0e-09 65.9 232 30.2
Sed0027661 Sechium edule HOM05D002903 ORTHO05D003066 1.0e-08 65.5 216 31.5
Cpa.g.sc26.66 Carica papaya HOM05D002903 ORTHO05D003066 1.4e-08 65.1 292 28.1
ECA234G1033 Erigeron canadensis HOM05D002903 ORTHO05D003066 1.4e-08 65.1 206 31.1
TPR.G30561 Trifolium pratense HOM05D002903 ORTHO05D003066 1.4e-08 65.1 207 27.1
MBI06_g27454_MAGBIO Magnolia biondii HOM05D002903 ORTHO05D003066 1.8e-08 64.7 308 30.2
ClCG08G003270 Citrullus lanatus HOM05D002903 ORTHO05D003066 2.3e-08 64.3 192 28.6
VMungo0647G0886 Vigna mungo HOM05D002903 ORTHO05D003066 2.3e-08 64.3 255 33.7
Lj1g0005014 Lotus japonicus HOM05D002903 ORTHO05D003066 3.0e-08 63.9 204 31.9
Oeu047153.1 Olea europaea HOM05D002903 ORTHO05D003066 3.0e-08 63.9 253 32.4
BcaC05g26046 Brassica carinata HOM05D002903 ORTHO05D003066 4.0e-08 63.5 274 28.8
Dinv19537 Davidia involucrata HOM05D002903 ORTHO05D003066 4.0e-08 63.5 217 32.7
Nitab4.5_0005642g0020 Nicotiana tabacum HOM05D002903 ORTHO05D003066 4.0e-08 63.5 193 31.6
TWI32G0321 Tripterygium wilfordii HOM05D002903 ORTHO05D003066 4.0e-08 63.5 173 35.8
HanXRQChr10g0309091 Helianthus annuus HOM05D002903 ORTHO05D003066 5.2e-08 63.2 297 29.0
BraA06t24841Z Brassica rapa HOM05D002903 ORTHO05D003066 6.7e-08 62.8 270 28.9
Cfa002912 Carpinus fangiana HOM05D002903 ORTHO05D003066 8.8e-08 62.4 281 29.2
Nitab4.5_0008281g0010 Nicotiana tabacum HOM05D002903 ORTHO05D003066 1.5e-07 61.6 255 27.8
Gohir.A02G069300 Gossypium hirsutum HOM05D002903 ORTHO05D003066 2.0e-07 61.2 290 29.3
Hma1.2p1_0539F.1_g174540 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 2.0e-07 61.2 164 35.4
CiPaw.04G081400 Carya illinoinensis HOM05D002903 ORTHO05D003066 3.3e-07 60.5 229 28.8
SalBow6G1573 Salvia bowleyana HOM05D002903 ORTHO05D003066 3.3e-07 60.5 102 39.2
Phvul.009G132400 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 4.4e-07 60.1 269 28.3
PGR042G1875 Punica granatum HOM05D002903 ORTHO05D003066 4.4e-07 60.1 238 27.7
Haze_25272 Corylus avellana HOM05D002903 ORTHO05D003066 5.7e-07 59.7 295 26.8
A06p17430 Brassica napus HOM05D000744 ORTHO05D000332 7.5e-07 59.3 272 28.3
Dinv24393 Davidia involucrata HOM05D002903 ORTHO05D003066 7.5e-07 59.3 268 31.3
Gohir.D04G032100 Gossypium hirsutum HOM05D002903 ORTHO05D003066 7.5e-07 59.3 248 27.0
Lsat_1_v5_gn_1_9061 Lactuca sativa HOM05D002903 ORTHO05D003066 7.5e-07 59.3 261 31.4
Potri.005G185200 Populus trichocarpa HOM05D002903 ORTHO05D003066 7.5e-07 59.3 293 27.0
Atru.chr13.1637 Acer truncatum HOM05D002903 ORTHO05D003066 9.7e-07 58.9 220 28.2
Solyc08g080860.4 Solanum lycopersicum HOM05D002903 ORTHO05D003066 9.7e-07 58.9 265 27.9
MSTRG.25346 Avicennia marina HOM05D002903 ORTHO05D003066 1.3e-06 58.5 269 25.7
AUR62007679 Chenopodium quinoa HOM05D002903 ORTHO05D003066 1.3e-06 58.5 183 32.2
AUR62013459 Chenopodium quinoa HOM05D002903 ORTHO05D003066 1.3e-06 58.5 172 34.3
Gorai.012G036500 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.3e-06 58.5 248 27.8
Sc26g0002820 Simmondsia chinensis HOM05D002903 ORTHO05D003066 1.3e-06 58.5 232 28.4
Actinidia06611 Actinidia chinensis HOM05D002903 ORTHO05D003066 1.7e-06 58.2 166 32.5
Glyma.06G119800 Glycine max HOM05D002903 ORTHO05D003066 1.7e-06 58.2 226 27.4
Peaxi162Scf00353g00026 Petunia axillaris HOM05D002903 ORTHO05D003066 1.7e-06 58.2 303 28.7
PGSC0003DMG400012217 Solanum tuberosum HOM05D002903 ORTHO05D003066 1.7e-06 58.2 262 28.6
BcaB07g32128 Brassica carinata HOM05D002903 ORTHO05D003066 2.2e-06 57.8 273 27.1
Haze_25271 Corylus avellana HOM05D002903 ORTHO05D003066 2.2e-06 57.8 295 26.4
Haze_25273 Corylus avellana HOM05D002903 ORTHO05D003066 2.2e-06 57.8 295 26.4
BolC5t30721H Brassica oleracea HOM05D002903 ORTHO05D003066 2.8e-06 57.4 276 28.3
MELO3C010580.2 Cucumis melo HOM05D002903 ORTHO05D003066 2.8e-06 57.4 189 28.0
Lj1g0005492 Lotus japonicus HOM05D002903 ORTHO05D003066 2.8e-06 57.4 181 33.1
CARHR021780 Cardamine hirsuta HOM05D002903 ORTHO05D003066 3.7e-06 57.0 207 30.4
Actinidia20071 Actinidia chinensis HOM05D002903 ORTHO05D003066 4.8e-06 56.6 168 32.7
Gohir.A05G383200 Gossypium hirsutum HOM05D002903 ORTHO05D003066 4.8e-06 56.6 248 25.8
Lj1g0027406 Lotus japonicus HOM05D002903 ORTHO05D003066 4.8e-06 56.6 202 29.2
BolC6t40142H Brassica oleracea HOM05D002903 ORTHO05D003066 6.3e-06 56.2 253 29.6
CsaV3_6G035580 Cucumis sativus L. HOM05D002903 ORTHO05D003066 6.3e-06 56.2 184 27.7
Hund17367 Selenicereus undatus HOM05D002903 ORTHO05D003066 6.3e-06 56.2 205 36.6
Actinidia10680 Actinidia chinensis HOM05D000744 ORTHO05D000332 8.2e-06 55.8 185 30.8
Actinidia15186 Actinidia chinensis HOM05D002903 ORTHO05D003066 8.2e-06 55.8 183 30.1
AL1G34490 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 8.2e-06 55.8 187 30.5
CARHR070490 Cardamine hirsuta HOM05D002903 ORTHO05D003066 8.2e-06 55.8 98 38.8
COL.COLO4_35772 Corchorus olitorius HOM05D002903 ORTHO05D003066 8.2e-06 55.8 209 27.8
Nitab4.5_0000496g0210 Nicotiana tabacum HOM05D002903 ORTHO05D003066 8.2e-06 55.8 281 29.2


User provided reference genes

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