Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 4.1e-148 528.1 275 100.0
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 3.4e-139 498.4 275 94.2
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 1.9e-76 290.0 275 60.4
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 3.1e-71 272.7 269 56.1
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 9.9e-70 267.7 273 56.4
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 3.2e-68 262.7 271 55.0
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 6.6e-66 255.0 277 54.2
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 5.4e-60 235.3 274 49.3
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 2.7e-59 233.0 271 49.4
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 1.7e-58 230.3 273 49.5
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 8.7e-58 228.0 273 50.5
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 1.1e-57 227.6 306 44.1
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 1.9e-57 226.9 270 51.5
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 7.3e-57 224.9 270 47.8
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 6.2e-56 221.9 275 47.6
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 1.8e-55 220.3 271 48.0
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 3.1e-55 219.5 273 47.6
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 6.9e-55 218.4 273 47.6
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 2.0e-54 216.9 265 47.5
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 2.6e-54 216.5 271 48.0
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 6.4e-53 211.8 274 45.6
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 3.2e-52 209.5 277 45.5
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 9.3e-52 208.0 273 46.9
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 2.1e-51 206.8 187 60.4
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 2.1e-51 206.8 275 45.8
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 2.7e-51 206.5 263 45.6
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 3.5e-51 206.1 273 46.5
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.0e-50 204.5 271 44.6
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.8e-50 203.8 271 44.6
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 3.0e-50 203.0 263 45.2
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 3.9e-50 202.6 268 46.6
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 3.9e-50 202.6 268 47.4
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 8.7e-50 201.4 263 43.7
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 1.9e-49 200.3 275 42.9
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 3.3e-49 199.5 275 42.5
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 4.3e-49 199.1 263 44.1
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 9.6e-49 198.0 268 48.1
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 9.6e-49 198.0 275 44.4
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 1.6e-48 197.2 268 44.8
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 1.6e-48 197.2 271 44.3
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 2.8e-48 196.4 268 45.9
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 4.8e-48 195.7 274 44.5
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 6.2e-48 195.3 268 42.2
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 1.1e-47 194.5 268 45.5
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 9.0e-47 191.4 270 44.8
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 1.2e-46 191.0 269 45.0
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 2.0e-46 190.3 381 37.0
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 5.8e-46 188.7 266 46.2
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 5.8e-46 188.7 265 43.4
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 1.7e-45 187.2 252 44.4
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 2.2e-45 186.8 270 42.6
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 8.4e-45 184.9 264 42.8
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 3.2e-44 183.0 282 42.2
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 4.2e-44 182.6 272 40.8
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 7.1e-44 181.8 281 41.6
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 7.1e-44 181.8 281 41.6
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 7.9e-43 178.3 276 42.8
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 6.7e-42 175.3 282 42.6
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 5.7e-41 172.2 259 40.5
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 1.4e-39 167.5 211 45.0
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 1.2e-38 164.5 308 38.3
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 1.2e-38 164.5 268 41.4
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 7.6e-38 161.8 274 35.8
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 2.2e-37 160.2 269 39.0
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 2.9e-37 159.8 280 37.5
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 3.8e-37 159.5 178 51.1
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 8.4e-37 158.3 268 43.7
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 1.4e-36 157.5 268 38.1
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 1.9e-36 157.1 268 37.7
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 1.9e-36 157.1 162 50.6
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 7.2e-36 155.2 222 43.2
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 1.2e-35 154.5 268 37.3
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 1.6e-35 154.1 272 36.8
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 3.5e-35 152.9 182 45.6
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 4.6e-35 152.5 270 37.0
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 4.6e-35 152.5 162 50.6
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 3.0e-34 149.8 268 36.9
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 3.0e-34 149.8 271 35.8
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 3.9e-34 149.4 268 37.7
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 8.7e-34 148.3 268 37.3
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 8.7e-34 148.3 268 37.3
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 7.4e-33 145.2 268 35.4
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 1.1e-31 141.4 189 47.1
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 4.5e-30 136.0 208 40.9
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 5.9e-30 135.6 270 35.6
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 2.9e-29 133.3 269 33.1
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 1.9e-28 130.6 227 35.7
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 2.5e-28 130.2 189 40.2
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 9.4e-28 128.3 246 35.0
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 1.4e-26 124.4 286 31.1
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 3.0e-26 123.2 267 34.5
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 3.9e-26 122.9 101 58.4
AagrBONN_evm.TU.Sc2ySwM_117.1984 Anthoceros agrestis HOM05D007225 ORTHO05D009062 2.5e-25 120.2 245 30.2
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 4.3e-25 119.4 273 32.2
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 5.7e-25 119.0 290 32.4
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 4.8e-24 115.9 187 39.6
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 3.2e-20 103.2 268 32.8
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 1.6e-19 100.9 184 38.0
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 2.1e-19 100.5 120 45.8
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 6.1e-19 99.0 259 32.8
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 4.4e-17 92.8 166 41.0
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 1.7e-16 90.9 99 47.5
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 2.8e-16 90.1 95 47.4
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 8.2e-16 88.6 167 40.1
SEGI_25786 Sequoiadendron giganteum HOM05D021798 ORTHO05D009062 2.2e-13 80.5 157 33.8
Zm00001eb434540 Zea mays HOM05D007225 ORTHO05D009062 1.1e-09 68.2 100 41.0
Os04g0693200 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 2.2e-08 63.9 71 46.5
GSVIVG01022344001 Vitis vinifera HOM05D007225 ORTHO05D009062 2.4e-07 60.5 109 39.4
CBR_g23098 Chara braunii HOM05D007225 ORTHO05D009062 4.1e-07 59.7 313 21.7
SMO143G0295 Selaginella moellendorffii HOM05D021798 ORTHO05D018028 7.0e-07 58.9 156 29.5


User provided reference genes

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