Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO528G0188 Papaver somniferum HOM05D008049 ORTHO05D010198 2.5e-139 498.8 261 100.0
PSO170G0957 Papaver somniferum HOM05D008049 ORTHO05D010198 2.0e-120 436.0 262 89.7
TAR381G0470 Trochodendron aralioides HOM05D008049 ORTHO05D010198 2.4e-81 306.2 313 56.9
MD15G1137300 Malus domestica HOM05D008049 ORTHO05D010198 2.4e-73 279.6 294 57.5
Dinv30334 Davidia involucrata HOM05D008049 ORTHO05D010198 3.4e-72 275.8 252 61.1
Cpa.g.sc37.30 Carica papaya HOM05D008049 ORTHO05D010198 9.4e-70 267.7 304 54.9
RcHm_v2.0_Chr2g0123171 Rosa chinensis HOM05D008049 ORTHO05D010198 3.0e-68 262.7 279 56.6
Atru.chr4.1095 Acer truncatum HOM05D008049 ORTHO05D010198 3.9e-68 262.3 276 58.0
Atru.chr4.1100 Acer truncatum HOM05D008049 ORTHO05D010198 3.9e-68 262.3 276 58.0
CiPaw.03G116500 Carya illinoinensis HOM05D008049 ORTHO05D010198 2.6e-67 259.6 246 60.2
Prupe.4G279900 Prunus persica HOM05D008049 ORTHO05D010198 7.4e-67 258.1 239 60.7
Ciclev10002216m.g Citrus clementina HOM05D008049 ORTHO05D010198 1.3e-66 257.3 273 57.5
Hma1.2p1_0134F.1_g061550 Hydrangea macrophylla HOM05D008049 ORTHO05D010198 1.3e-66 257.3 249 57.8
Potri.005G069900 Populus trichocarpa HOM05D008049 ORTHO05D010198 4.8e-66 255.4 246 61.4
TWI31G1063 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 1.1e-65 254.2 295 52.9
QL10p040433 Quercus lobata HOM05D008049 ORTHO05D010198 1.2e-64 250.8 244 58.2
THA.LOC104818414 Tarenaya hassleriana HOM05D008049 ORTHO05D010198 1.0e-63 247.7 245 59.2
Aa31LG3G17800 Aethionema arabicum HOM05D008049 ORTHO05D010198 2.2e-63 246.5 243 58.0
FvH4_1g25250 Fragaria vesca HOM05D008049 ORTHO05D010198 8.5e-63 244.6 274 54.0
FAN26G0656 Fragaria x ananassa HOM05D008049 ORTHO05D010198 4.2e-62 242.3 274 53.6
FAN26G2415 Fragaria x ananassa HOM05D008049 ORTHO05D010198 4.2e-62 242.3 274 53.6
AL6G19520 Arabidopsis lyrata HOM05D008049 ORTHO05D010198 5.5e-62 241.9 302 50.7
CARHR204240 Cardamine hirsuta HOM05D008049 ORTHO05D010198 1.6e-61 240.4 242 57.9
C09p68210 Brassica napus HOM05D008049 ORTHO05D010198 2.7e-61 239.6 269 52.0
BolC9t59570H Brassica oleracea HOM05D008049 ORTHO05D010198 2.7e-61 239.6 269 52.0
AT5G08770 Arabidopsis thaliana HOM05D008049 ORTHO05D010198 6.1e-61 238.4 269 52.0
Sp6g34110 Schrenkiella parvula HOM05D008049 ORTHO05D010198 1.4e-60 237.3 272 51.5
PGR102G0265 Punica granatum HOM05D008049 ORTHO05D010198 1.8e-60 236.9 280 53.2
TWI79G0517 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 1.8e-60 236.9 292 49.7
Carub.0006s0774 Capsella rubella HOM05D008049 ORTHO05D010198 3.0e-60 236.1 248 55.6
Thhalv10014201m.g Eutrema salsugineum HOM05D008049 ORTHO05D010198 3.0e-60 236.1 244 57.4
Actinidia16520 Actinidia chinensis HOM05D008049 ORTHO05D010198 1.1e-59 234.2 254 54.3
Nn5g28352 Nelumbo nucifera HOM05D008049 ORTHO05D010198 1.1e-59 234.2 242 55.8
FAN19G2909 Fragaria x ananassa HOM05D008049 ORTHO05D010198 1.5e-59 233.8 272 52.6
A10p28010 Brassica napus HOM05D008049 ORTHO05D010198 3.3e-59 232.6 270 51.1
BraA10t44851Z Brassica rapa HOM05D008049 ORTHO05D010198 2.2e-58 229.9 270 50.7
Sc09g0002140 Simmondsia chinensis HOM05D008049 ORTHO05D010198 1.8e-57 226.9 265 52.8
BcaB08g37227 Brassica carinata HOM05D008049 ORTHO05D010198 4.1e-57 225.7 248 53.6
Thecc.01G140900 Theobroma cacao HOM05D008049 ORTHO05D010198 9.1e-57 224.6 240 54.6
DCAR_013179 Daucus carota HOM05D008049 ORTHO05D010198 1.6e-56 223.8 285 48.8
Phvul.009G152600 Phaseolus vulgaris HOM05D008049 ORTHO05D010198 1.6e-56 223.8 242 52.9
Duzib187G0110 Durio zibethinus HOM05D008049 ORTHO05D010198 2.0e-56 223.4 237 55.3
arahy.Tifrunner.gnm1.ann1.WZNZ1Z Arachis hypogaea HOM05D008049 ORTHO05D010198 5.9e-56 221.9 319 48.9
arahy.Tifrunner.gnm1.ann1.M4SWJY Arachis hypogaea HOM05D008049 ORTHO05D010198 2.2e-55 219.9 266 51.9
Medtr3g096940 Medicago truncatula HOM05D008049 ORTHO05D010198 2.9e-55 219.5 284 50.7
Duzib147G0405 Durio zibethinus HOM05D008049 ORTHO05D010198 1.5e-54 217.2 244 53.3
Glyma.06G157600 Glycine max HOM05D008049 ORTHO05D010198 3.2e-54 216.1 297 46.1
Gorai.012G037400 Gossypium raimondii HOM05D008049 ORTHO05D010198 7.2e-54 214.9 244 52.0
Glyma.04G208100 Glycine max HOM05D008049 ORTHO05D010198 1.2e-53 214.2 302 45.7
Lj1g0009929 Lotus japonicus HOM05D008049 ORTHO05D010198 3.4e-51 206.1 247 51.4
Migut.H00830 Erythranthe guttata HOM05D008049 ORTHO05D010198 2.2e-47 193.4 301 43.5
Lalb_Chr08g0238031 Lupinus albus HOM05D008049 ORTHO05D010198 6.5e-47 191.8 229 52.4
VMungo1309G0538 Vigna mungo HOM05D008049 ORTHO05D010198 1.2e-45 187.6 302 41.7
unitig_899.g15147 Utricularia gibba HOM05D008049 ORTHO05D010198 1.8e-41 173.7 217 49.3
COL.COLO4_12107 Corchorus olitorius HOM05D008049 ORTHO05D010198 2.0e-40 170.2 163 57.1
EL10Ac4g09675 Beta vulgaris HOM05D008049 ORTHO05D010198 2.7e-40 169.9 270 45.2
Gohir.A05G382200 Gossypium hirsutum HOM05D008049 ORTHO05D010198 6.8e-36 155.2 239 41.8
Gohir.D04G033000 Gossypium hirsutum HOM05D008049 ORTHO05D010198 2.0e-35 153.7 239 41.4
MD15G1137000 Malus domestica HOM05D008049 ORTHO05D010198 1.7e-34 150.6 154 57.8
AUR62006889 Chenopodium quinoa HOM05D008049 ORTHO05D010198 1.3e-31 141.0 171 50.3
Sabra05G0056900 Salix brachista HOM05D008049 ORTHO05D010198 6.6e-31 138.7 115 62.6
CDE04G3132 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 2.2e-26 123.6 283 36.0
CDE07G0304 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 1.0e-23 114.8 214 38.8
Nitab4.5_0000905g0120 Nicotiana tabacum HOM05D008049 ORTHO05D010198 1.3e-23 114.4 163 44.8
MBI06_g26010_MAGBIO Magnolia biondii HOM05D008049 ORTHO05D010198 6.2e-21 105.5 174 39.1
Psat5g058560 Pisum sativum HOM05D008049 ORTHO05D010198 1.2e-19 101.3 95 58.9
SGA_v2.0_scaffold20G08957 Striga asiatica HOM05D008049 ORTHO05D010198 3.4e-19 99.8 108 49.1
AUR62000540 Chenopodium quinoa HOM05D008049 ORTHO05D010198 3.5e-16 89.7 98 53.1
TPR.G7867 Trifolium pratense HOM05D008049 ORTHO05D010198 2.3e-15 87.0 164 41.5
Ca_16998_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 5.4e-09 65.9 66 57.6
Ca_17026_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 5.4e-09 65.9 66 57.6
arahy.Tifrunner.gnm1.ann1.P087XE Arachis hypogaea HOM05D008049 ORTHO05D010198 2.5e-06 57.0 38 71.1
Peaxi162Scf00925g00015 Petunia axillaris HOM05D008049 ORTHO05D010198 2.5e-06 57.0 88 40.9


User provided reference genes

Program Settings