Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO528G0175 Papaver somniferum HOM05D020877 ORTHO05D003486 6.4e-239 830.5 457 100.0
PSO170G3037 Papaver somniferum HOM05D020877 ORTHO05D003486 1.8e-172 609.8 461 75.9
PSO170G0742 Papaver somniferum HOM05D020877 ORTHO05D003486 1.3e-58 231.5 560 34.5
PSO528G0080 Papaver somniferum HOM05D020877 ORTHO05D003486 6.7e-55 219.2 557 33.4
PSO528G0025 Papaver somniferum HOM05D020877 ORTHO05D003486 2.5e-41 174.1 537 31.3
Nn5g28446 Nelumbo nucifera HOM05D006236 ORTHO05D003486 2.2e-21 107.8 420 26.0
Aqoxy1G03360 Aquilegia oxysepala HOM05D020429 ORTHO05D023582 6.3e-21 106.3 373 27.1
Aqoxy3G01606 Aquilegia oxysepala HOM05D020429 ORTHO05D023582 1.6e-19 101.7 424 27.4
Aqoxy6G00303 Aquilegia oxysepala HOM05D020429 ORTHO05D023582 3.0e-15 87.4 213 31.9
TAR625G0695 Trochodendron aralioides HOM05D006236 ORTHO05D003486 4.0e-15 87.0 196 31.6
ATR0824G107 Amborella trichopoda HOM05D049392 ORTHO05D003486 2.6e-14 84.3 112 34.8
HPP92_008975 Vanilla planifolia HOM05D006236 ORTHO05D003486 4.4e-14 83.6 387 24.8
BcaC03g15725 Brassica carinata HOM05D009282 ORTHO05D003486 1.3e-13 82.0 218 28.9
BolC2t09471H Brassica oleracea HOM05D009282 ORTHO05D003486 1.3e-13 82.0 218 28.9
C02p34410 Brassica napus HOM05D009282 ORTHO05D003486 1.7e-13 81.6 218 28.9
BraA02t07136Z Brassica rapa HOM05D009282 ORTHO05D003486 2.8e-13 80.9 212 27.4
Peaxi162Scf00234g00718 Petunia axillaris HOM05D012804 ORTHO05D003486 3.7e-13 80.5 432 23.8
Sp5g32440 Schrenkiella parvula HOM05D009282 ORTHO05D003486 4.9e-13 80.1 196 33.2
BcaB05g25029 Brassica carinata HOM05D009282 ORTHO05D003486 6.3e-13 79.7 188 31.4
A02p21190 Brassica napus HOM05D009282 ORTHO05D003486 6.3e-13 79.7 218 28.9
Nitab4.5_0000205g0060 Nicotiana tabacum HOM05D012804 ORTHO05D003486 1.1e-12 79.0 439 23.7
CAN.G1187.8 Capsicum annuum HOM05D012804 ORTHO05D003486 2.4e-12 77.8 478 21.5
Dinv14700 Davidia involucrata HOM05D006236 ORTHO05D003486 5.4e-12 76.6 193 30.1
Solyc11g072250.2 Solanum lycopersicum HOM05D012804 ORTHO05D003486 7.0e-12 76.3 470 20.6
GSVIVG01008800001 Vitis vinifera HOM05D006236 ORTHO05D003486 7.0e-12 76.3 224 26.8
Gohir.D02G077800 Gossypium hirsutum HOM05D006236 ORTHO05D003486 3.5e-11 73.9 133 30.8
Thhalv10018476m.g Eutrema salsugineum HOM05D009282 ORTHO05D003486 5.9e-11 73.2 223 29.6
QL12p002389 Quercus lobata HOM05D006236 ORTHO05D003486 5.9e-11 73.2 106 35.8
RcHm_v2.0_Chr6g0296811 Rosa chinensis HOM05D006236 ORTHO05D003486 7.8e-11 72.8 401 21.9
Sopen11g029920 Solanum pennellii HOM05D012804 ORTHO05D003486 7.8e-11 72.8 477 20.8
Carub.0002s2415 Capsella rubella HOM05D009282 ORTHO05D003486 1.7e-10 71.6 198 29.3
CiPaw.11G076600 Carya illinoinensis HOM05D006236 ORTHO05D003486 2.9e-10 70.9 100 36.0
FvH4_2g27990 Fragaria vesca HOM05D006236 ORTHO05D003486 2.9e-10 70.9 496 22.0
Carub.0003s0731 Capsella rubella HOM05D009282 ORTHO05D003486 3.8e-10 70.5 105 36.2
Ca_17011_v3 Cicer arietinum L. HOM05D006236 ORTHO05D003486 5.0e-10 70.1 107 36.4
Os05g0423200 Oryza sativa ssp. japonica HOM05D006236 ORTHO05D003486 5.0e-10 70.1 99 37.4
CDE02G3425 Ceratophyllum demersum HOM05D006236 ORTHO05D003486 8.6e-10 69.3 206 30.1
Psat0s1315g0200 Pisum sativum HOM05D006236 ORTHO05D003486 8.6e-10 69.3 110 37.3
CARHR070750 Cardamine hirsuta HOM05D009282 ORTHO05D003486 1.1e-09 68.9 189 28.0
Ciclev10000428m.g Citrus clementina HOM05D006236 ORTHO05D003486 1.1e-09 68.9 191 28.8
TAR381G0115 Trochodendron aralioides HOM05D006236 ORTHO05D003486 1.1e-09 68.9 328 25.6
MD08G1159900 Malus domestica HOM05D006236 ORTHO05D003486 1.5e-09 68.6 511 21.5
MD15G1133200 Malus domestica HOM05D006236 ORTHO05D003486 1.5e-09 68.6 458 24.2
Peaxi162Scf00062g00089 Petunia axillaris HOM05D012804 ORTHO05D003486 1.5e-09 68.6 102 32.4
Aa31LG7G5540 Aethionema arabicum HOM05D012602 ORTHO05D003486 1.9e-09 68.2 115 37.4
Thhalv10020550m.g Eutrema salsugineum HOM05D009282 ORTHO05D003486 1.9e-09 68.2 125 32.8
Nitab4.5_0001925g0210 Nicotiana tabacum HOM05D012804 ORTHO05D003486 1.9e-09 68.2 102 33.3
Phvul.009G156700 Phaseolus vulgaris HOM05D006236 ORTHO05D003486 2.5e-09 67.8 103 35.0
AT1G77270 Arabidopsis thaliana HOM05D009282 ORTHO05D003486 3.3e-09 67.4 126 34.1
Sp3g06660 Schrenkiella parvula HOM05D009282 ORTHO05D003486 3.3e-09 67.4 107 36.4
TPR.G28699 Trifolium pratense HOM05D006236 ORTHO05D003486 3.3e-09 67.4 104 34.6
Medtr1g026790 Medicago truncatula HOM05D006236 ORTHO05D003486 4.3e-09 67.0 228 28.5
Os04g0539100 Oryza sativa ssp. japonica HOM05D006236 ORTHO05D003486 4.3e-09 67.0 100 37.0
FAN15G3020 Fragaria x ananassa HOM05D006236 ORTHO05D003486 5.6e-09 66.6 487 21.6
Pp3c8_15980 Physcomitrium patens HOM05D006236 ORTHO05D003486 5.6e-09 66.6 99 34.3
Potri.002G077500 Populus trichocarpa HOM05D006236 ORTHO05D003486 5.6e-09 66.6 186 28.0
BraA01t04367Z Brassica rapa HOM05D009282 ORTHO05D003486 7.3e-09 66.2 107 36.4
BolC1t05537H Brassica oleracea HOM05D009282 ORTHO05D003486 1.2e-08 65.5 110 35.5
AT3G07730 Arabidopsis thaliana HOM05D009282 ORTHO05D003486 1.6e-08 65.1 115 33.9
A05p40490 Brassica napus HOM05D009282 ORTHO05D003486 1.6e-08 65.1 108 37.0
BraA05t22782Z Brassica rapa HOM05D009282 ORTHO05D003486 1.6e-08 65.1 108 37.0
Zm00001eb075330 Zea mays HOM05D006236 ORTHO05D003486 1.6e-08 65.1 101 34.7
CsaV3_7G022170 Cucumis sativus L. HOM05D006236 ORTHO05D003486 2.8e-08 64.3 104 33.7
SpUn0522_0010 Schrenkiella parvula HOM05D009282 ORTHO05D003486 2.8e-08 64.3 107 36.4
AL3G19090 Arabidopsis lyrata HOM05D009282 ORTHO05D003486 3.6e-08 63.9 115 33.9
Sabra02G0060900 Salix brachista HOM05D006236 ORTHO05D003486 3.6e-08 63.9 116 31.0
Sed0000792 Sechium edule HOM05D006236 ORTHO05D003486 3.6e-08 63.9 400 23.8
Aa31LG4G7280 Aethionema arabicum HOM05D009282 ORTHO05D003486 4.7e-08 63.5 105 39.0
AL2G37450 Arabidopsis lyrata HOM05D009282 ORTHO05D003486 4.7e-08 63.5 101 36.6
C05p59590 Brassica napus HOM05D009282 ORTHO05D003486 8.0e-08 62.8 100 36.0
BolC5t34614H Brassica oleracea HOM05D009282 ORTHO05D003486 8.0e-08 62.8 110 35.5
Oeu047174.1 Olea europaea HOM05D006236 ORTHO05D003486 8.0e-08 62.8 114 34.2
CiPaw.03G184300 Carya illinoinensis HOM05D006236 ORTHO05D003486 1.0e-07 62.4 196 23.5
Duzib093G1452 Durio zibethinus HOM05D006236 ORTHO05D003486 1.0e-07 62.4 352 23.3
Atru.chr13.1589 Acer truncatum HOM05D006236 ORTHO05D003486 1.4e-07 62.0 388 28.9
CAN.G484.6 Capsicum annuum HOM05D012804 ORTHO05D003486 1.4e-07 62.0 125 28.8
ClCG09G021830 Citrullus lanatus HOM05D006236 ORTHO05D003486 1.4e-07 62.0 433 22.2
Lalb_Chr08g0237871 Lupinus albus HOM05D006236 ORTHO05D003486 1.4e-07 62.0 173 23.7
Solyc12g099920.2 Solanum lycopersicum HOM05D012804 ORTHO05D003486 1.8e-07 61.6 98 33.7
Sopen12g034540 Solanum pennellii HOM05D012804 ORTHO05D003486 2.3e-07 61.2 99 34.3
PGSC0003DMG400004651 Solanum tuberosum HOM05D012804 ORTHO05D003486 2.3e-07 61.2 99 34.3
DCAR_028204 Daucus carota HOM05D006236 ORTHO05D003486 3.1e-07 60.8 103 31.1
Thecc.08G133800 Theobroma cacao HOM05D006236 ORTHO05D003486 3.1e-07 60.8 367 28.6
TWI60G0548 Tripterygium wilfordii HOM05D006236 ORTHO05D003486 5.2e-07 60.1 475 28.8
BcaB04g21273 Brassica carinata HOM05D009282 ORTHO05D003486 6.8e-07 59.7 107 35.5
SMO147G0016 Selaginella moellendorffii HOM05D006236 ORTHO05D003486 6.8e-07 59.7 99 34.3
SMO196G0029 Selaginella moellendorffii HOM05D002377 ORTHO05D003486 6.8e-07 59.7 99 36.4
Haze_03510 Corylus avellana HOM05D006236 ORTHO05D003486 8.9e-07 59.3 118 29.7
Dinv27264 Davidia involucrata HOM05D006236 ORTHO05D003486 8.9e-07 59.3 178 27.0
PSO170G4674 Papaver somniferum HOM05D020877 ORTHO05D003486 1.2e-06 58.9 313 26.8
SEGI_20168 Sequoiadendron giganteum HOM05D029892 ORTHO05D003486 1.2e-06 58.9 100 30.0
Actinidia15208 Actinidia chinensis HOM05D006236 ORTHO05D003486 1.5e-06 58.5 428 27.6
Cfa012635 Carpinus fangiana HOM05D006236 ORTHO05D003486 1.5e-06 58.5 111 26.1
FAN24G2475 Fragaria x ananassa HOM05D006236 ORTHO05D003486 4.4e-06 57.0 471 21.7
Gohir.A02G070600 Gossypium hirsutum HOM05D006236 ORTHO05D003486 4.4e-06 57.0 133 26.3
Nitab4.5_0011766g0010 Nicotiana tabacum HOM05D012804 ORTHO05D003486 7.5e-06 56.2 497 22.1
Psat5g058120 Pisum sativum HOM05D006236 ORTHO05D003486 7.5e-06 56.2 116 32.8
SEGI_21165 Sequoiadendron giganteum HOM05D029892 ORTHO05D003486 7.5e-06 56.2 101 30.7
Gorai.005G087400 Gossypium raimondii HOM05D006236 ORTHO05D003486 9.8e-06 55.8 111 30.6
TPR.G24541 Trifolium pratense HOM05D006236 ORTHO05D003486 9.8e-06 55.8 104 31.7


User provided reference genes

Program Settings