Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 1.1e-192 676.4 321 100.0
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 4.7e-188 661.0 321 97.8
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 4.8e-185 651.0 321 96.0
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 3.6e-148 528.5 328 74.7
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.1e-147 526.9 328 75.3
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 2.4e-147 525.8 328 75.3
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 1.5e-146 523.1 328 72.9
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 3.4e-146 521.9 327 73.4
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.3e-145 520.0 326 73.9
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 8.4e-145 517.3 328 72.0
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 1.1e-144 516.9 328 73.2
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 1.1e-144 516.9 326 73.0
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 2.4e-144 515.8 305 76.7
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 3.2e-144 515.4 327 73.7
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 3.2e-144 515.4 327 72.2
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 4.2e-144 515.0 326 73.0
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 5.4e-144 514.6 328 71.3
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 5.4e-144 514.6 328 71.3
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 9.2e-144 513.8 328 72.6
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 2.7e-143 512.3 327 72.5
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 6.0e-143 511.1 328 71.0
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 7.8e-143 510.8 328 71.3
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.0e-142 510.4 328 73.5
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 1.0e-142 510.4 328 71.0
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 3.0e-142 508.8 328 70.4
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 3.0e-142 508.8 328 72.3
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 3.0e-142 508.8 329 71.7
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 5.1e-142 508.1 325 73.2
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 6.6e-142 507.7 327 72.2
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 1.1e-141 506.9 308 76.6
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.5e-141 505.8 302 76.2
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.5e-141 505.8 302 76.2
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 2.5e-141 505.8 328 71.0
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 3.3e-141 505.4 328 70.7
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 5.6e-141 504.6 327 70.9
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 7.3e-141 504.2 328 70.7
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.1e-140 502.7 329 70.5
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 2.8e-140 502.3 327 70.6
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 2.8e-140 502.3 326 70.6
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 6.2e-140 501.1 334 71.0
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 8.1e-140 500.7 304 75.0
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 1.1e-139 500.4 305 74.1
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 1.1e-139 500.4 328 71.3
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.1e-139 500.4 328 70.7
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.8e-139 499.6 328 69.8
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.8e-139 499.6 329 70.2
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 1.8e-139 499.6 304 75.7
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 1.8e-139 499.6 302 72.8
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 5.3e-139 498.0 328 70.1
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 1.5e-138 496.5 304 75.7
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.5e-138 496.5 303 74.6
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 4.4e-138 495.0 300 73.0
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 1.3e-137 493.4 307 74.6
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 1.3e-137 493.4 305 72.1
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.3e-137 493.4 329 70.5
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 1.3e-137 493.4 327 69.4
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 2.2e-137 492.7 328 68.6
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 2.9e-137 492.3 327 70.0
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 4.9e-137 491.5 305 72.8
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 6.4e-137 491.1 304 75.0
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 1.9e-136 489.6 304 74.0
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 3.2e-136 488.8 304 73.0
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 3.2e-136 488.8 320 72.2
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 3.2e-136 488.8 320 72.2
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 2.1e-135 486.1 317 72.6
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 2.1e-135 486.1 305 74.4
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.7e-134 483.0 308 70.8
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.7e-134 483.0 328 67.1
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 2.3e-134 482.6 327 68.2
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 3.9e-134 481.9 328 69.8
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 1.1e-133 480.3 305 73.1
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 5.6e-133 478.0 326 66.3
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 9.6e-133 477.2 326 69.6
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 1.3e-132 476.9 328 68.0
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.1e-132 476.1 303 72.3
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.1e-132 476.1 303 72.6
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 5.3e-131 471.5 335 66.6
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 1.3e-129 466.8 302 68.9
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 1.1e-128 463.8 292 73.3
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 1.1e-128 463.8 282 72.7
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 2.3e-126 456.1 328 64.3
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 1.5e-125 453.4 326 66.9
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 2.1e-124 449.5 326 64.7
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.0e-122 443.0 305 65.9
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 3.4e-122 442.2 305 65.6
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 2.9e-121 439.1 281 70.8
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 8.4e-121 437.6 328 64.3
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 3.2e-120 435.6 253 77.9
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 1.0e-118 430.6 256 77.3
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 8.7e-118 427.6 254 76.8
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.5e-117 426.8 328 61.6
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 3.3e-117 425.6 328 63.1
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 4.8e-116 421.8 328 60.1
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.8e-115 419.9 255 74.9
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 2.2e-113 412.9 307 61.6
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 8.7e-110 401.0 308 58.4
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 1.4e-107 393.7 305 60.7
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 2.0e-106 389.8 303 57.8
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 3.4e-106 389.0 303 57.1
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 3.8e-105 385.6 254 69.7
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 1.1e-101 374.0 254 67.3
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 3.7e-100 369.0 328 56.1
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.7e-95 352.8 241 65.6
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 2.6e-90 336.3 217 72.4
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 1.4e-88 330.5 312 51.9
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 1.4e-86 323.9 198 75.8
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 5.5e-64 248.8 166 64.5
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 5.9e-58 228.8 144 77.1
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 1.6e-55 220.7 132 78.8
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 7.5e-45 185.3 306 36.6
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 4.1e-43 179.5 294 36.1
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 3.0e-41 173.3 117 63.2
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 2.3e-38 163.7 305 34.4
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 1.6e-34 151.0 83 77.1
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.4e-30 137.1 111 65.8
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 4.4e-29 132.9 109 52.3
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 7.6e-29 132.1 133 51.9
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 1.2e-26 124.8 77 76.6
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.1e-24 118.2 68 69.1
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 4.9e-20 102.8 53 84.9
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 1.9e-16 90.9 59 64.4
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 1.7e-12 77.8 72 50.0
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 7.9e-10 68.9 48 62.5
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 4.3e-08 63.2 61 54.1
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 5.6e-08 62.8 48 54.2
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 6.2e-07 59.3 36 72.2
Rhsim11G0068700 Rhododendron simsii HOM05D006264 ORTHO05D007739 4.0e-06 56.6 39 71.8


User provided reference genes

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