Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO528G0080 Papaver somniferum HOM05D020877 ORTHO05D003486 7.6e-285 983.4 591 100.0
PSO170G0742 Papaver somniferum HOM05D020877 ORTHO05D003486 4.0e-209 731.9 481 89.2
PSO528G0025 Papaver somniferum HOM05D020877 ORTHO05D003486 1.7e-122 444.1 553 53.9
PSO170G3037 Papaver somniferum HOM05D020877 ORTHO05D003486 6.4e-58 229.6 667 31.8
PSO528G0175 Papaver somniferum HOM05D020877 ORTHO05D003486 7.8e-56 222.6 557 33.4
PSO170G4674 Papaver somniferum HOM05D020877 ORTHO05D003486 1.0e-39 169.1 206 48.1
Aqoxy1G03360 Aquilegia oxysepala HOM05D020429 ORTHO05D023582 4.5e-27 127.1 335 30.7
Aqoxy3G01606 Aquilegia oxysepala HOM05D020429 ORTHO05D023582 8.5e-26 122.9 338 31.4
Nn5g28446 Nelumbo nucifera HOM05D006236 ORTHO05D003486 3.7e-21 107.5 350 28.0
TAR625G0695 Trochodendron aralioides HOM05D006236 ORTHO05D003486 4.6e-16 90.5 126 41.3
HPP92_008975 Vanilla planifolia HOM05D006236 ORTHO05D003486 6.1e-16 90.1 352 26.4
Aqoxy6G00303 Aquilegia oxysepala HOM05D020429 ORTHO05D023582 1.1e-14 85.9 238 28.6
Os05g0423200 Oryza sativa ssp. japonica HOM05D006236 ORTHO05D003486 2.0e-14 85.1 344 25.0
Peaxi162Scf00234g00718 Petunia axillaris HOM05D012804 ORTHO05D003486 2.2e-13 81.6 337 24.3
GSVIVG01008800001 Vitis vinifera HOM05D006236 ORTHO05D003486 8.2e-13 79.7 110 40.0
Zm00001eb075330 Zea mays HOM05D006236 ORTHO05D003486 8.2e-13 79.7 354 24.6
SEGI_21165 Sequoiadendron giganteum HOM05D029892 ORTHO05D003486 1.1e-12 79.3 297 26.6
CAN.G1187.8 Capsicum annuum HOM05D012804 ORTHO05D003486 5.3e-12 77.0 334 22.2
SMO196G0029 Selaginella moellendorffii HOM05D002377 ORTHO05D003486 5.3e-12 77.0 114 43.0
Aa31LG7G5540 Aethionema arabicum HOM05D012602 ORTHO05D003486 1.2e-11 75.9 136 38.2
Sp5g32440 Schrenkiella parvula HOM05D009282 ORTHO05D003486 1.2e-11 75.9 115 38.3
THA.LOC104812078 Tarenaya hassleriana HOM05D006236 ORTHO05D003486 1.5e-11 75.5 353 25.8
Nitab4.5_0000205g0060 Nicotiana tabacum HOM05D012804 ORTHO05D003486 2.0e-11 75.1 321 22.4
CDE02G3425 Ceratophyllum demersum HOM05D006236 ORTHO05D003486 2.6e-11 74.7 296 25.0
Psat0s1315g0200 Pisum sativum HOM05D006236 ORTHO05D003486 2.6e-11 74.7 113 41.6
AagrBONN_evm.TU.Sc2ySwM_228.1542 Anthoceros agrestis HOM05D002377 ORTHO05D003486 3.4e-11 74.3 99 41.4
Thecc.08G133800 Theobroma cacao HOM05D006236 ORTHO05D003486 4.5e-11 73.9 138 35.5
CiPaw.03G184300 Carya illinoinensis HOM05D006236 ORTHO05D003486 5.9e-11 73.6 295 25.8
Gohir.D02G077800 Gossypium hirsutum HOM05D006236 ORTHO05D003486 7.7e-11 73.2 111 36.9
ClCG09G021830 Citrullus lanatus HOM05D006236 ORTHO05D003486 1.3e-10 72.4 322 26.7
SEGI_20168 Sequoiadendron giganteum HOM05D029892 ORTHO05D003486 1.3e-10 72.4 100 36.0
Ciclev10000428m.g Citrus clementina HOM05D006236 ORTHO05D003486 1.7e-10 72.0 103 37.9
Sed0000792 Sechium edule HOM05D006236 ORTHO05D003486 1.7e-10 72.0 339 27.1
Os04g0539100 Oryza sativa ssp. japonica HOM05D006236 ORTHO05D003486 2.2e-10 71.6 319 25.1
SEGI_27702 Sequoiadendron giganteum HOM05D002377 ORTHO05D003486 2.2e-10 71.6 287 26.5
Manes.02G169100 Manihot esculenta HOM05D006236 ORTHO05D003486 3.8e-10 70.9 293 24.9
Nitab4.5_0001925g0210 Nicotiana tabacum HOM05D012804 ORTHO05D003486 5.0e-10 70.5 116 31.9
Nitab4.5_0011766g0010 Nicotiana tabacum HOM05D012804 ORTHO05D003486 5.0e-10 70.5 116 31.9
BcaB05g25029 Brassica carinata HOM05D009282 ORTHO05D003486 8.5e-10 69.7 108 37.0
BcaC03g15725 Brassica carinata HOM05D009282 ORTHO05D003486 1.4e-09 68.9 108 37.0
BolC2t09471H Brassica oleracea HOM05D009282 ORTHO05D003486 1.4e-09 68.9 108 37.0
BraA02t07136Z Brassica rapa HOM05D009282 ORTHO05D003486 1.4e-09 68.9 108 37.0
ATR0824G107 Amborella trichopoda HOM05D049392 ORTHO05D003486 1.9e-09 68.6 311 25.4
A02p21190 Brassica napus HOM05D009282 ORTHO05D003486 1.9e-09 68.6 108 37.0
C02p34410 Brassica napus HOM05D009282 ORTHO05D003486 1.9e-09 68.6 108 37.0
CiPaw.11G076600 Carya illinoinensis HOM05D006236 ORTHO05D003486 1.9e-09 68.6 104 34.6
Pp3c8_15980 Physcomitrium patens HOM05D006236 ORTHO05D003486 1.9e-09 68.6 96 37.5
Sp3g06660 Schrenkiella parvula HOM05D009282 ORTHO05D003486 3.2e-09 67.8 127 38.6
TPR.G32494 Trifolium pratense HOM05D006236 ORTHO05D003486 4.2e-09 67.4 110 36.4
Carub.0003s0731 Capsella rubella HOM05D009282 ORTHO05D003486 5.5e-09 67.0 115 38.3
QL12p002389 Quercus lobata HOM05D006236 ORTHO05D003486 5.5e-09 67.0 106 34.9
Aa31LG4G7280 Aethionema arabicum HOM05D009282 ORTHO05D003486 7.2e-09 66.6 108 38.0
Pp3c14_13780 Physcomitrium patens HOM05D002377 ORTHO05D003486 7.2e-09 66.6 107 36.4
AT1G77270 Arabidopsis thaliana HOM05D009282 ORTHO05D003486 9.4e-09 66.2 108 37.0
Haze_03510 Corylus avellana HOM05D006236 ORTHO05D003486 1.6e-08 65.5 136 32.4
DCAR_028204 Daucus carota HOM05D006236 ORTHO05D003486 1.6e-08 65.5 140 30.7
Dinv14700 Davidia involucrata HOM05D006236 ORTHO05D003486 1.6e-08 65.5 163 29.4
Thhalv10018476m.g Eutrema salsugineum HOM05D009282 ORTHO05D003486 2.1e-08 65.1 104 36.5
PGR044G2319 Punica granatum HOM05D006236 ORTHO05D003486 2.1e-08 65.1 115 39.1
Solyc12g099920.2 Solanum lycopersicum HOM05D012804 ORTHO05D003486 2.1e-08 65.1 124 30.6
Sopen12g034540 Solanum pennellii HOM05D012804 ORTHO05D003486 2.1e-08 65.1 124 30.6
Carub.0002s2415 Capsella rubella HOM05D009282 ORTHO05D003486 2.7e-08 64.7 108 38.0
Solyc11g072250.2 Solanum lycopersicum HOM05D012804 ORTHO05D003486 3.6e-08 64.3 329 23.7
Carub.0001s2100 Capsella rubella HOM05D012602 ORTHO05D003486 4.7e-08 63.9 132 34.8
CARHR021930 Cardamine hirsuta HOM05D012602 ORTHO05D003486 4.7e-08 63.9 132 31.1
Thhalv10020550m.g Eutrema salsugineum HOM05D009282 ORTHO05D003486 4.7e-08 63.9 127 34.6
Medtr1g026790 Medicago truncatula HOM05D006236 ORTHO05D003486 4.7e-08 63.9 122 36.9
Sopen11g029920 Solanum pennellii HOM05D012804 ORTHO05D003486 4.7e-08 63.9 343 23.6
PGSC0003DMG400004651 Solanum tuberosum HOM05D012804 ORTHO05D003486 4.7e-08 63.9 124 30.6
Eucgr.E01002 Eucalyptus grandis HOM05D006236 ORTHO05D003486 6.1e-08 63.5 126 37.3
AL2G37450 Arabidopsis lyrata HOM05D009282 ORTHO05D003486 7.9e-08 63.2 108 37.0
Peaxi162Scf00062g00089 Petunia axillaris HOM05D012804 ORTHO05D003486 7.9e-08 63.2 116 29.3
AT4G01170 Arabidopsis thaliana HOM05D009282 ORTHO05D003486 1.4e-07 62.4 113 33.6
Phvul.009G156700 Phaseolus vulgaris HOM05D006236 ORTHO05D003486 1.4e-07 62.4 105 36.2
Medtr2g010820 Medicago truncatula HOM05D006236 ORTHO05D003486 1.8e-07 62.0 104 37.5
SGA_v2.0_scaffold28G11968 Striga asiatica HOM05D006236 ORTHO05D003486 1.8e-07 62.0 104 37.5
AT3G07730 Arabidopsis thaliana HOM05D009282 ORTHO05D003486 2.3e-07 61.6 113 34.5
Lalb_Chr08g0237871 Lupinus albus HOM05D006236 ORTHO05D003486 2.3e-07 61.6 133 31.6
Medtr1g026800 Medicago truncatula HOM05D006236 ORTHO05D003486 2.3e-07 61.6 137 33.6
CARHR070750 Cardamine hirsuta HOM05D009282 ORTHO05D003486 3.9e-07 60.8 108 35.2
CsaV3_7G022170 Cucumis sativus L. HOM05D006236 ORTHO05D003486 3.9e-07 60.8 106 34.0
Duzib093G1452 Durio zibethinus HOM05D006236 ORTHO05D003486 3.9e-07 60.8 319 25.4
Sabra02G0060900 Salix brachista HOM05D006236 ORTHO05D003486 3.9e-07 60.8 107 32.7
BolC5t34614H Brassica oleracea HOM05D009282 ORTHO05D003486 5.2e-07 60.5 125 34.4
Mapoly0015s0190 Marchantia polymorpha HOM05D006236 ORTHO05D003486 5.2e-07 60.5 104 34.6
SpUn0522_0010 Schrenkiella parvula HOM05D009282 ORTHO05D003486 5.2e-07 60.5 134 35.8
TPR.G24541 Trifolium pratense HOM05D006236 ORTHO05D003486 5.2e-07 60.5 142 33.1
VMungo1309G0219 Vigna mungo HOM05D006236 ORTHO05D003486 5.2e-07 60.5 299 24.4
TWI60G0548 Tripterygium wilfordii HOM05D006236 ORTHO05D003486 6.7e-07 60.1 113 29.2
C05p59590 Brassica napus HOM05D009282 ORTHO05D003486 8.8e-07 59.7 125 36.0
Thhalv10007934m.g Eutrema salsugineum HOM05D012602 ORTHO05D003486 1.1e-06 59.3 131 34.4
Migut.N03258 Erythranthe guttata HOM05D006236 ORTHO05D003486 1.5e-06 58.9 120 33.3
Potri.002G077500 Populus trichocarpa HOM05D006236 ORTHO05D003486 1.5e-06 58.9 105 32.4
SMO147G0016 Selaginella moellendorffii HOM05D006236 ORTHO05D003486 1.5e-06 58.9 254 28.0
CAN.G484.6 Capsicum annuum HOM05D012804 ORTHO05D003486 2.0e-06 58.5 113 27.4
CARHR082440 Cardamine hirsuta HOM05D009282 ORTHO05D003486 2.0e-06 58.5 103 38.8
Medtr1g026810 Medicago truncatula HOM05D006236 ORTHO05D003486 2.0e-06 58.5 139 33.8
Nitab4.5_0003471g0060 Nicotiana tabacum HOM05D012804 ORTHO05D003486 2.0e-06 58.5 97 34.0
Prupe.3G258400 Prunus persica HOM05D006236 ORTHO05D003486 2.6e-06 58.2 114 37.7
Sed0021928 Sechium edule HOM05D006236 ORTHO05D003486 2.6e-06 58.2 309 23.3
BcaC05g29566 Brassica carinata HOM05D009282 ORTHO05D003486 3.3e-06 57.8 127 36.2
Lj1g0007441 Lotus japonicus HOM05D006236 ORTHO05D003486 3.3e-06 57.8 350 21.7
A05p40490 Brassica napus HOM05D009282 ORTHO05D003486 5.7e-06 57.0 125 35.2
BraA05t22782Z Brassica rapa HOM05D009282 ORTHO05D003486 5.7e-06 57.0 125 35.2
Glyma.13G034700 Glycine max HOM05D006236 ORTHO05D003486 5.7e-06 57.0 138 32.6
Actinidia15208 Actinidia chinensis HOM05D006236 ORTHO05D003486 9.7e-06 56.2 137 30.7
Cfa012635 Carpinus fangiana HOM05D006236 ORTHO05D003486 9.7e-06 56.2 106 28.3
Glyma.14G156000 Glycine max HOM05D006236 ORTHO05D003486 9.7e-06 56.2 105 35.2


User provided reference genes

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