Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO528G0015 Papaver somniferum HOM05D006466 ORTHO05D008084 8.3e-112 407.1 218 100.0
PSO170G1975 Papaver somniferum HOM05D006466 ORTHO05D008084 2.8e-107 392.1 220 96.8
TAR375G0032 Trochodendron aralioides HOM05D006466 ORTHO05D008084 5.5e-55 218.4 226 59.7
Dinv39131 Davidia involucrata HOM05D006466 ORTHO05D008084 2.3e-53 213.0 238 56.7
Potri.001G123200 Populus trichocarpa HOM05D006466 ORTHO05D008084 3.9e-53 212.2 231 56.3
GSVIVG01001313001 Vitis vinifera HOM05D006466 ORTHO05D008084 1.5e-52 210.3 229 59.8
Eucgr.D02068 Eucalyptus grandis HOM05D006466 ORTHO05D008084 2.8e-51 206.1 219 59.8
Lj1A353T9 Lonicera japonica HOM05D006466 ORTHO05D008084 8.1e-51 204.5 220 57.7
Actinidia27463 Actinidia chinensis HOM05D006466 ORTHO05D008084 1.4e-50 203.8 230 56.5
Sabra01G0094900 Salix brachista HOM05D006466 ORTHO05D008084 1.8e-50 203.4 230 54.8
Hma1.2p1_2380F.1_g320960 Hydrangea macrophylla HOM05D006466 ORTHO05D008084 2.4e-50 203.0 239 55.6
Nn1g01036 Nelumbo nucifera HOM05D006466 ORTHO05D008084 3.1e-50 202.6 222 58.1
FAN04G2180 Fragaria x ananassa HOM05D006466 ORTHO05D008084 9.0e-50 201.1 223 56.5
Thecc.03G253200 Theobroma cacao HOM05D006466 ORTHO05D008084 1.2e-49 200.7 228 54.8
Ciclev10005762m.g Citrus clementina HOM05D006466 ORTHO05D008084 1.5e-49 200.3 226 56.6
Ah.12g056750 Amaranthus hybridus HOM05D006466 ORTHO05D008084 3.4e-49 199.1 227 57.3
Solyc08g078740.1 Solanum lycopersicum HOM05D006466 ORTHO05D008084 7.6e-49 198.0 226 54.4
Sopen08g027210 Solanum pennellii HOM05D006466 ORTHO05D008084 7.6e-49 198.0 226 54.4
ClCG01G004000 Citrullus lanatus HOM05D006466 ORTHO05D008084 1.7e-48 196.8 217 56.2
Gohir.A12G217700 Gossypium hirsutum HOM05D006466 ORTHO05D008084 1.7e-48 196.8 230 54.8
FAN18G0606 Fragaria x ananassa HOM05D006466 ORTHO05D008084 2.9e-48 196.1 222 55.0
Cfa012739 Carpinus fangiana HOM05D006466 ORTHO05D008084 3.8e-48 195.7 232 57.3
MELO3C005537.2 Cucumis melo HOM05D006466 ORTHO05D008084 3.8e-48 195.7 218 57.3
QL12p012545 Quercus lobata HOM05D006466 ORTHO05D008084 3.8e-48 195.7 228 53.1
PGSC0003DMG401004755 Solanum tuberosum HOM05D006466 ORTHO05D008084 3.8e-48 195.7 226 53.5
FvH4_5g18710 Fragaria vesca HOM05D006466 ORTHO05D008084 1.4e-47 193.7 222 54.5
CsaV3_5G004180 Cucumis sativus L. HOM05D006466 ORTHO05D008084 3.2e-47 192.6 225 55.6
Gorai.008G235900 Gossypium raimondii HOM05D006466 ORTHO05D008084 3.2e-47 192.6 230 54.3
TWI81G0148 Tripterygium wilfordii HOM05D006466 ORTHO05D008084 3.2e-47 192.6 236 53.8
Gohir.D12G220200 Gossypium hirsutum HOM05D006466 ORTHO05D008084 7.1e-47 191.4 230 53.9
FAN13G1623 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.2e-46 190.7 222 53.2
RcHm_v2.0_Chr7g0203001 Rosa chinensis HOM05D006466 ORTHO05D008084 1.2e-46 190.7 221 53.4
CiPaw.11G153200 Carya illinoinensis HOM05D006466 ORTHO05D008084 2.1e-46 189.9 228 54.8
CDE02G4728 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 2.1e-46 189.9 211 54.0
Lsat_1_v5_gn_3_521 Lactuca sativa HOM05D006466 ORTHO05D008084 2.7e-46 189.5 224 54.0
Sed0012351 Sechium edule HOM05D006466 ORTHO05D008084 2.3e-45 186.4 215 54.9
Haze_07889 Corylus avellana HOM05D006466 ORTHO05D008084 3.0e-45 186.0 230 54.3
Manes.01G079600 Manihot esculenta HOM05D006466 ORTHO05D008084 8.7e-45 184.5 221 52.5
Sed0026776 Sechium edule HOM05D006466 ORTHO05D008084 8.7e-45 184.5 215 53.5
SHI10480 Sapria himalayana HOM05D006466 ORTHO05D008084 6.3e-43 178.3 222 50.5
Nn6g33981 Nelumbo nucifera HOM05D006466 ORTHO05D008084 8.2e-43 177.9 155 62.6
Nitab4.5_0000312g0170 Nicotiana tabacum HOM05D006466 ORTHO05D008084 8.2e-43 177.9 230 48.3
Medtr4g101030 Medicago truncatula HOM05D006466 ORTHO05D008084 1.8e-42 176.8 235 51.1
Nitab4.5_0008481g0010 Nicotiana tabacum HOM05D006466 ORTHO05D008084 3.1e-42 176.0 233 46.8
PGR031G1557 Punica granatum HOM05D006466 ORTHO05D008084 4.1e-42 175.6 230 49.1
Atru.chr2.1841 Acer truncatum HOM05D006466 ORTHO05D008084 6.9e-42 174.9 216 53.2
Manes.15G178500 Manihot esculenta HOM05D006466 ORTHO05D008084 6.9e-42 174.9 222 50.5
CANSAT21G1921 Cannabis sativa HOM05D006466 ORTHO05D008084 1.2e-41 174.1 238 49.6
Manes.15G178400 Manihot esculenta HOM05D006466 ORTHO05D008084 1.5e-41 173.7 222 49.1
MSTRG.12091 Avicennia marina HOM05D006466 ORTHO05D008084 2.0e-41 173.3 238 49.2
Lj4g0024258 Lotus japonicus HOM05D006466 ORTHO05D008084 3.4e-41 172.6 222 50.9
ATR0193G040 Amborella trichopoda HOM05D006466 ORTHO05D008084 4.5e-41 172.2 152 60.5
Cpa.g.sc29.144 Carica papaya HOM05D006466 ORTHO05D008084 5.9e-41 171.8 222 50.5
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 5.9e-41 171.8 232 48.7
Rhsim07G0108000 Rhododendron simsii HOM05D006466 ORTHO05D008084 7.6e-41 171.4 185 56.2
FAN08G0853 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.0e-40 171.0 222 49.1
Peaxi162Scf00002g00172 Petunia axillaris HOM05D006466 ORTHO05D008084 4.2e-39 165.6 251 45.0
Aqoxy6G01886 Aquilegia oxysepala HOM05D006466 ORTHO05D008084 5.5e-39 165.2 238 48.7
ECA232G3467 Erigeron canadensis HOM05D006466 ORTHO05D008084 7.2e-39 164.9 235 45.5
TPR.G37616 Trifolium pratense HOM05D006466 ORTHO05D008084 1.2e-38 164.1 227 47.1
unitig_61.g26196 Utricularia gibba HOM05D006466 ORTHO05D008084 2.1e-38 163.3 239 47.3
Psat4g071640 Pisum sativum HOM05D006466 ORTHO05D008084 2.7e-38 162.9 175 54.9
GSVIVG01030884001 Vitis vinifera HOM05D006466 ORTHO05D008084 4.6e-38 162.2 211 48.3
BcaNung02868 Brassica carinata HOM05D006466 ORTHO05D008084 1.3e-37 160.6 251 45.4
Phvul.003G219800 Phaseolus vulgaris HOM05D006466 ORTHO05D008084 1.3e-37 160.6 227 49.8
Carub.0007s2494 Capsella rubella HOM05D006466 ORTHO05D008084 2.3e-37 159.8 257 45.9
HPP92_014482 Vanilla planifolia HOM05D006466 ORTHO05D008084 2.3e-37 159.8 243 46.1
Aa31LG2G12660 Aethionema arabicum HOM05D006466 ORTHO05D008084 3.0e-37 159.5 241 46.1
Lj8A452G56 Lonicera japonica HOM05D006466 ORTHO05D008084 3.0e-37 159.5 220 50.0
Prupe.5G071300 Prunus persica HOM05D006466 ORTHO05D008084 8.7e-37 157.9 226 50.0
Migut.A00968 Erythranthe guttata HOM05D006466 ORTHO05D008084 1.1e-36 157.5 176 51.7
SalBow6G4398 Salvia bowleyana HOM05D006466 ORTHO05D008084 1.5e-36 157.1 182 51.6
Cc08_g12600 Coffea canephora HOM05D006466 ORTHO05D008084 2.5e-36 156.4 193 48.7
Sp7g15110 Schrenkiella parvula HOM05D006466 ORTHO05D008084 4.3e-36 155.6 257 46.3
arahy.Tifrunner.gnm1.ann1.HK6I2L Arachis hypogaea HOM05D006466 ORTHO05D008084 5.7e-36 155.2 224 47.3
CARHR222950 Cardamine hirsuta HOM05D006466 ORTHO05D008084 5.7e-36 155.2 255 45.5
arahy.Tifrunner.gnm1.ann1.LISY29 Arachis hypogaea HOM05D006466 ORTHO05D008084 7.4e-36 154.8 237 46.4
arahy.Tifrunner.gnm1.ann1.VT8LY8 Arachis hypogaea HOM05D006466 ORTHO05D008084 7.4e-36 154.8 232 46.6
Thhalv10026056m.g Eutrema salsugineum HOM05D006466 ORTHO05D008084 1.6e-35 153.7 254 44.9
A03p49940 Brassica napus HOM05D006466 ORTHO05D008084 6.3e-35 151.8 253 45.1
BraA03t14087Z Brassica rapa HOM05D006466 ORTHO05D008084 6.3e-35 151.8 253 45.1
SGA_v2.0_scaffold120G32877 Striga asiatica HOM05D006466 ORTHO05D008084 6.3e-35 151.8 247 44.5
MD04G1088600 Malus domestica HOM05D006466 ORTHO05D008084 1.8e-34 150.2 239 44.4
AL7G38350 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 4.1e-34 149.1 254 44.9
AL7G38400 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 4.1e-34 149.1 254 44.9
VMungo0251G3296 Vigna mungo HOM05D006466 ORTHO05D008084 6.9e-34 148.3 229 45.0
BcaC06g33488 Brassica carinata HOM05D006466 ORTHO05D008084 1.5e-33 147.1 254 43.7
Eucgr.D02058 Eucalyptus grandis HOM05D006466 ORTHO05D008084 1.5e-33 147.1 219 47.9
SEGI_30297 Sequoiadendron giganteum HOM05D006466 ORTHO05D008084 1.5e-33 147.1 226 45.1
C07p47980 Brassica napus HOM05D006466 ORTHO05D008084 2.0e-33 146.7 252 43.7
BolC7t45321H Brassica oleracea HOM05D006466 ORTHO05D008084 2.0e-33 146.7 252 43.7
Lalb_Chr16g0389331 Lupinus albus HOM05D006466 ORTHO05D008084 4.5e-33 145.6 230 44.3
Os10g0507500 Oryza sativa ssp. japonica HOM05D006466 ORTHO05D008084 7.7e-33 144.8 225 43.1
CDE11G0010 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 2.5e-31 139.8 184 48.9
AT4G16535 Arabidopsis thaliana HOM05D006466 ORTHO05D008084 3.2e-31 139.4 251 43.0
arahy.Tifrunner.gnm1.ann1.MY6G43 Arachis hypogaea HOM05D006466 ORTHO05D008084 4.2e-31 139.0 230 44.8
AUR62039958 Chenopodium quinoa HOM05D006466 ORTHO05D008084 2.7e-30 136.3 222 46.4
AUR62007505 Chenopodium quinoa HOM05D006466 ORTHO05D008084 2.6e-28 129.8 217 42.9
Ca_21959_v3 Cicer arietinum L. HOM05D006466 ORTHO05D008084 2.6e-28 129.8 213 44.1
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 4.4e-28 129.0 222 42.8
Oeu019590.1 Olea europaea HOM05D006466 ORTHO05D008084 5.7e-28 128.6 228 42.5
Glyma.17G140900 Glycine max HOM05D006466 ORTHO05D008084 4.1e-26 122.5 236 41.9
Pp3c3_19850 Physcomitrium patens HOM05D006466 ORTHO05D008084 1.4e-23 114.0 228 39.5
Mapoly0015s0012 Marchantia polymorpha HOM05D006466 ORTHO05D008084 2.5e-23 113.2 254 35.4
arahy.Tifrunner.gnm1.ann1.Y2DLV0 Arachis hypogaea HOM05D006466 ORTHO05D008084 4.8e-19 99.0 102 52.0
Zm00001eb044010 Zea mays HOM05D006466 ORTHO05D008084 7.2e-15 85.1 62 67.7
Oeu039628.1 Olea europaea HOM05D006466 ORTHO05D008084 4.7e-14 82.4 53 77.4
HanXRQChr02g0051581 Helianthus annuus HOM05D006466 ORTHO05D008084 3.0e-13 79.7 98 48.0
arahy.Tifrunner.gnm1.ann1.AC5BZW Arachis hypogaea HOM05D006466 ORTHO05D008084 4.0e-13 79.3 173 37.6
Eucgr.L01522 Eucalyptus grandis HOM05D006466 ORTHO05D008084 6.7e-13 78.6 51 74.5
Actinidia05202 Actinidia chinensis HOM05D006466 ORTHO05D008084 3.7e-11 72.8 86 50.0
arahy.Tifrunner.gnm1.ann1.W2BU8F Arachis hypogaea HOM05D004339 ORTHO05D002389 7.0e-10 68.6 174 36.2
Sc22g0000810 Simmondsia chinensis HOM05D006466 ORTHO05D008084 1.0e-08 64.7 113 45.1
CBR_g29445 Chara braunii HOM05D006466 ORTHO05D008084 2.2e-08 63.5 94 50.0
BcaC04g19403 Brassica carinata HOM05D006466 ORTHO05D008084 2.1e-06 57.0 99 45.5
BolC9t58475H Brassica oleracea HOM05D006466 ORTHO05D008084 2.1e-06 57.0 99 45.5
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 3.6e-06 56.2 102 37.3


User provided reference genes

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