Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 3.8e-188 661.4 336 100.0
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 2.8e-175 618.6 335 93.4
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 4.8e-167 591.3 335 88.4
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 7.4e-160 567.4 334 84.4
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 9.6e-160 567.0 335 84.2
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 6.7e-145 517.7 335 75.5
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 6.9e-142 507.7 334 74.0
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 9.1e-142 507.3 334 74.6
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-140 503.4 334 74.0
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.6e-133 479.2 334 68.6
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.7e-132 476.5 335 68.4
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.4e-131 473.4 335 68.7
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 5.3e-126 454.9 335 67.5
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.0e-125 453.0 325 69.5
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 3.8e-124 448.7 333 63.7
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-121 440.7 323 65.9
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 5.2e-121 438.3 329 65.3
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-119 433.7 324 66.7
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.2e-112 410.6 334 60.8
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 3.7e-111 405.6 329 59.3
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-109 399.4 334 56.9
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-98 363.2 265 65.3
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 2.6e-96 356.3 216 85.6
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.8e-89 333.6 328 54.0
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 4.0e-89 332.4 329 52.3
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 4.0e-89 332.4 328 53.0
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 5.2e-89 332.0 334 53.0
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 1.2e-88 330.9 329 53.2
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 3.4e-88 329.3 329 53.2
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 5.8e-88 328.6 329 53.5
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 1.7e-87 327.0 329 52.9
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 2.9e-87 326.2 329 54.4
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 4.9e-87 325.5 324 53.1
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 4.9e-87 325.5 331 51.7
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 4.9e-87 325.5 328 53.4
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 8.3e-87 324.7 326 54.0
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 8.3e-87 324.7 330 51.5
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 1.1e-86 324.3 329 52.3
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 1.1e-86 324.3 329 51.4
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.4e-86 323.9 324 52.8
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.4e-86 323.2 326 53.7
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 2.4e-86 323.2 336 53.0
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 2.4e-86 323.2 329 52.9
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 3.2e-86 322.8 329 52.0
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 4.1e-86 322.4 328 51.2
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 5.4e-86 322.0 326 54.3
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 5.4e-86 322.0 328 51.2
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 7.0e-86 321.6 328 51.2
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 9.2e-86 321.2 334 52.4
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 9.2e-86 321.2 334 52.4
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 1.2e-85 320.9 334 52.4
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 1.2e-85 320.9 328 52.7
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.6e-85 320.5 331 52.6
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 1.6e-85 320.5 328 51.5
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 2.1e-85 320.1 331 51.7
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.1e-85 320.1 328 51.5
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 2.7e-85 319.7 329 51.4
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 3.5e-85 319.3 330 52.4
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 3.5e-85 319.3 330 52.4
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 3.5e-85 319.3 330 51.8
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 3.5e-85 319.3 329 52.3
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 4.6e-85 318.9 328 51.8
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 4.6e-85 318.9 328 51.8
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 4.6e-85 318.9 329 51.1
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 4.6e-85 318.9 331 53.2
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 6.0e-85 318.5 328 50.9
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 6.0e-85 318.5 331 50.8
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 6.0e-85 318.5 335 50.7
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 7.8e-85 318.2 329 52.0
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 1.0e-84 317.8 329 53.2
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.0e-84 317.8 329 52.0
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 1.3e-84 317.4 328 50.9
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.3e-84 317.4 328 51.5
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 1.7e-84 317.0 329 51.4
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 1.7e-84 317.0 329 51.1
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 2.3e-84 316.6 329 51.7
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 2.3e-84 316.6 328 50.0
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 3.0e-84 316.2 328 51.8
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 3.0e-84 316.2 329 49.5
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 3.0e-84 316.2 328 51.5
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 3.0e-84 316.2 328 50.0
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 3.9e-84 315.8 328 52.1
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 8.6e-84 314.7 329 52.3
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 8.6e-84 314.7 329 50.2
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 8.6e-84 314.7 329 50.2
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 1.1e-83 314.3 328 52.4
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 1.5e-83 313.9 334 49.1
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 2.5e-83 313.2 336 51.8
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 3.3e-83 312.8 329 51.4
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 3.3e-83 312.8 329 50.8
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 4.3e-83 312.4 331 51.4
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 7.3e-83 311.6 329 50.8
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 7.3e-83 311.6 328 50.9
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 9.5e-83 311.2 316 51.3
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 9.5e-83 311.2 329 51.1
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 2.1e-82 310.1 329 50.2
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 2.1e-82 310.1 329 49.5
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 2.8e-82 309.7 325 51.7
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 4.7e-82 308.9 320 50.6
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 6.2e-82 308.5 329 49.2
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 6.2e-82 308.5 329 51.1
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 1.1e-81 307.8 329 50.8
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 1.4e-81 307.4 329 48.9
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 2.3e-81 306.6 328 49.4
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 3.1e-81 306.2 344 48.5
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 6.8e-81 305.1 328 49.1
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 8.9e-81 304.7 330 49.4
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 3.4e-80 302.8 328 49.7
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 5.8e-80 302.0 329 50.5
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 9.9e-80 301.2 360 47.2
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 1.3e-79 300.8 329 50.5
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 1.7e-79 300.4 348 48.6
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.7e-79 300.4 360 46.9
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 8.3e-79 298.1 329 49.8
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 1.4e-78 297.4 331 47.7
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 1.4e-78 297.4 329 48.0
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 3.2e-78 296.2 324 51.2
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 4.3e-75 285.8 324 48.1
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 5.6e-75 285.4 403 42.9
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 8.1e-74 281.6 329 48.0
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 5.8e-72 275.4 328 47.9
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 9.9e-72 274.6 275 49.5
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 1.4e-70 270.8 329 46.2
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 4.3e-67 259.2 275 49.8
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 5.6e-67 258.8 343 44.9
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 4.4e-64 249.2 269 51.7
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 3.8e-63 246.1 196 59.7
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.4e-62 243.4 334 44.3
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 1.7e-60 237.3 352 41.2
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 2.5e-59 233.4 227 56.4
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 4.8e-58 229.2 181 58.6
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 5.8e-56 222.2 218 52.8
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 2.8e-50 203.4 214 50.0
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 8.7e-44 181.8 242 45.0
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 2.2e-34 150.6 149 53.7
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 6.3e-34 149.1 150 50.0
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 7.7e-32 142.1 179 43.6
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 7.2e-30 135.6 98 66.3
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 1.2e-29 134.8 142 47.2
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.2e-29 134.8 159 49.7
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 7.9e-29 132.1 346 31.8
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.1e-27 128.3 369 31.2
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 4.1e-25 119.8 175 45.1
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 9.4e-22 108.6 213 32.4
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.8e-20 104.4 358 28.8
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 4.4e-19 99.8 135 43.7
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.3e-18 98.2 105 47.6
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 3.7e-18 96.7 306 28.1
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 3.7e-18 96.7 119 47.1
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.5e-14 84.0 358 26.8
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 3.0e-12 77.0 268 28.0
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 1.5e-11 74.7 154 35.1
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 2.0e-11 74.3 63 54.0
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 2.6e-11 73.9 311 27.3
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 5.7e-11 72.8 66 48.5
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.8e-10 70.5 66 50.0
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 4.5e-08 63.2 48 58.3
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 1.7e-07 61.2 86 41.9
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 2.9e-07 60.5 113 30.1
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 2.9e-07 60.5 44 65.9
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 5.0e-07 59.7 43 65.1
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 5.0e-07 59.7 52 50.0


User provided reference genes

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