Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 1.6e-177 625.9 313 100.0
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 2.4e-168 595.5 313 95.8
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 9.2e-88 327.8 323 58.2
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 4.3e-85 318.9 316 58.5
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 1.8e-83 313.5 326 55.5
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 2.0e-82 310.1 318 55.3
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 2.2e-81 306.6 310 57.4
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 1.1e-80 304.3 306 56.9
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 2.4e-80 303.1 306 56.2
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 5.4e-80 302.0 304 54.3
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.6e-79 300.4 313 55.3
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 1.6e-79 300.4 322 53.7
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 2.0e-79 300.1 310 54.5
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 2.7e-79 299.7 314 54.1
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 4.6e-79 298.9 317 53.6
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 6.0e-79 298.5 243 63.8
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 6.0e-79 298.5 306 55.6
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 7.8e-79 298.1 313 53.4
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 1.0e-78 297.7 298 54.4
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 2.3e-78 296.6 321 56.1
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 3.0e-78 296.2 306 54.9
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 3.0e-78 296.2 301 57.1
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 5.0e-78 295.4 215 68.4
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 6.6e-78 295.0 316 53.8
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 6.6e-78 295.0 302 53.6
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 8.6e-78 294.7 233 63.9
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 8.6e-78 294.7 315 52.7
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 8.6e-78 294.7 227 64.8
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.9e-77 293.5 309 52.4
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 1.9e-77 293.5 311 56.3
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 2.5e-77 293.1 312 52.6
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 4.3e-77 292.4 300 56.7
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 7.3e-77 291.6 310 51.9
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 9.5e-77 291.2 322 54.0
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 9.5e-77 291.2 310 54.5
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 2.1e-76 290.0 305 54.1
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 2.8e-76 289.7 328 53.4
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 3.6e-76 289.3 235 63.8
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 4.7e-76 288.9 300 52.3
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 8.0e-76 288.1 309 55.7
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 1.4e-75 287.3 312 51.6
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 1.8e-75 287.0 340 50.9
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.8e-75 287.0 273 57.5
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 2.3e-75 286.6 311 54.3
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 2.3e-75 286.6 343 51.6
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 4.0e-75 285.8 333 51.1
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 6.8e-75 285.0 290 55.5
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 1.2e-74 284.3 223 63.2
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 1.2e-74 284.3 328 53.0
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.2e-74 284.3 275 56.7
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 2.6e-74 283.1 356 50.0
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 3.4e-74 282.7 322 53.4
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 3.4e-74 282.7 320 52.5
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 4.4e-74 282.3 253 59.3
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 1.3e-73 280.8 317 51.1
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 1.3e-73 280.8 322 52.2
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 1.3e-73 280.8 317 53.0
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 2.2e-73 280.0 355 49.6
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 2.2e-73 280.0 218 62.4
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 2.2e-73 280.0 277 55.2
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 2.9e-73 279.6 309 52.8
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 2.9e-73 279.6 248 58.9
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 4.9e-73 278.9 328 50.0
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 6.4e-73 278.5 312 52.2
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 4.1e-72 275.8 287 54.0
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 4.1e-72 275.8 309 52.1
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 4.1e-72 275.8 259 57.1
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 7.0e-72 275.0 316 50.0
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 9.2e-72 274.6 297 52.5
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 2.1e-71 273.5 290 53.8
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 2.1e-71 273.5 288 51.4
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.7e-71 273.1 315 51.4
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 3.5e-71 272.7 303 51.5
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 3.5e-71 272.7 295 52.9
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 6.0e-71 271.9 332 50.3
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 7.8e-71 271.6 200 68.5
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 7.8e-71 271.6 257 58.8
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.3e-70 270.8 242 57.4
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 1.7e-70 270.4 247 56.3
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 2.3e-70 270.0 315 49.5
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 2.3e-70 270.0 226 60.6
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 3.9e-70 269.2 326 49.1
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 1.5e-69 267.3 313 49.5
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 4.3e-69 265.8 310 50.6
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.1e-68 263.5 336 48.8
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 2.1e-68 263.5 218 60.1
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 2.8e-68 263.1 321 48.6
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 2.8e-68 263.1 321 48.6
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 8.1e-68 261.5 329 47.7
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 8.1e-68 261.5 329 48.3
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 8.9e-67 258.1 262 55.3
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 1.5e-66 257.3 291 51.5
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 2.2e-65 253.4 272 53.3
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 2.9e-65 253.1 272 53.3
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 6.4e-65 251.9 290 50.3
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 2.4e-64 250.0 317 48.6
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.6e-63 247.3 277 50.5
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 2.7e-63 246.5 370 43.2
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 6.6e-62 241.9 297 48.8
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 6.6e-62 241.9 209 61.2
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.2e-58 231.1 191 61.3
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 1.3e-57 227.6 364 41.2
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 1.1e-56 224.6 271 48.7
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 3.2e-56 223.0 226 54.0
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 5.4e-56 222.2 215 53.5
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 1.2e-55 221.1 178 60.7
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 2.3e-54 216.9 155 70.3
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 5.1e-54 215.7 219 52.5
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 1.4e-48 197.6 247 47.4
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 4.2e-48 196.1 244 46.7
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 1.2e-47 194.5 151 67.5
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 1.6e-44 184.1 217 46.1
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 1.7e-41 174.1 246 43.5
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.9e-40 170.6 184 52.7
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 1.2e-39 167.9 222 49.1
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 1.5e-37 161.0 249 39.4
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 7.4e-37 158.7 225 41.3
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 7.4e-37 158.7 225 41.3
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 2.7e-31 140.2 196 40.8
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 4.0e-27 126.3 89 71.9
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 1.3e-22 111.3 178 40.4
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 3.0e-22 110.2 90 60.0
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 1.3e-20 104.8 214 33.6
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 4.1e-11 73.2 55 63.6
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 1.0e-06 58.5 123 29.3
PRCOL_00005055 Prasinoderma coloniale HOM05D006231 ORTHO05D007857 2.3e-06 57.4 159 27.0


User provided reference genes

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