Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 2.1e-272 941.8 495 100.0
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 4.9e-253 877.5 495 92.5
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 3.4e-161 572.4 491 62.7
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 4.4e-161 572.0 495 63.0
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 2.3e-149 533.1 446 59.2
Nn1g02268 Nelumbo nucifera HOM05D006774 ORTHO05D008411 5.8e-145 518.5 408 64.0
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 1.4e-138 497.3 450 58.9
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 2.9e-136 489.6 441 57.8
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 6.4e-136 488.4 454 52.6
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 1.9e-135 486.9 494 54.3
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 2.1e-134 483.4 439 56.3
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 7.8e-134 481.5 494 53.6
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 2.3e-133 479.9 494 53.0
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 9.6e-132 474.6 443 56.0
CiPaw.10G139100 Carya illinoinensis HOM05D006774 ORTHO05D008411 9.6e-132 474.6 502 51.8
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 9.6e-132 474.6 451 56.8
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 4.0e-130 469.2 494 54.0
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 9.0e-130 468.0 493 52.1
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 9.0e-130 468.0 441 56.2
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 9.0e-130 468.0 451 52.5
FAN09G1854 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.5e-129 467.2 405 55.3
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 1.3e-128 464.2 441 55.3
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 4.9e-128 462.2 448 54.7
FvH4_6g06010 Fragaria vesca HOM05D006774 ORTHO05D008411 1.4e-127 460.7 393 56.0
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 1.4e-127 460.7 391 58.1
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 2.4e-127 459.9 431 55.0
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 3.2e-127 459.5 441 52.8
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 7.9e-126 454.9 430 54.9
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 1.0e-125 454.5 424 54.5
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 2.3e-125 453.4 498 54.2
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 3.9e-125 452.6 424 54.7
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 3.9e-125 452.6 458 52.4
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 8.7e-125 451.4 450 52.9
MSTRG.20428 Avicennia marina HOM05D006774 ORTHO05D008411 3.3e-124 449.5 449 51.7
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 4.3e-124 449.1 438 52.3
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 4.3e-124 449.1 494 50.2
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 7.4e-124 448.4 388 58.2
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 7.4e-124 448.4 429 53.6
FAN05G2700 Fragaria x ananassa HOM05D006774 ORTHO05D008411 9.6e-124 448.0 393 54.5
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 1.6e-123 447.2 432 54.9
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 4.8e-123 445.7 497 50.9
Migut.N02011 Erythranthe guttata HOM05D006774 ORTHO05D008411 4.8e-123 445.7 451 51.7
FAN05G0244 Fragaria x ananassa HOM05D006774 ORTHO05D008411 8.1e-123 444.9 392 55.1
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 8.1e-123 444.9 500 53.0
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 1.4e-122 444.1 436 51.1
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 1.4e-122 444.1 436 51.1
CSS0040526 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 4.0e-122 442.6 366 59.3
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 6.9e-122 441.8 393 54.7
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 1.2e-121 441.0 435 51.7
Lalb_Chr18g0045661 Lupinus albus HOM05D006774 ORTHO05D008411 1.5e-121 440.7 436 52.8
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 2.6e-121 439.9 383 56.7
Lsat_1_v5_gn_9_86761 Lactuca sativa HOM05D006774 ORTHO05D008411 4.5e-121 439.1 468 50.4
Carub.0002s0819 Capsella rubella HOM05D006774 ORTHO05D008411 1.3e-120 437.6 442 50.7
Sed0009699 Sechium edule HOM05D006774 ORTHO05D008411 2.2e-120 436.8 443 52.4
Duzib128G0809 Durio zibethinus HOM05D006774 ORTHO05D008411 4.9e-120 435.6 412 53.6
Thhalv10023440m.g Eutrema salsugineum HOM05D006774 ORTHO05D008411 6.4e-120 435.3 493 46.0
RcHm_v2.0_Chr3g0454971 Rosa chinensis HOM05D006774 ORTHO05D008411 8.4e-120 434.9 391 54.7
C01p34610 Brassica napus HOM05D006774 ORTHO05D008411 2.4e-119 433.3 443 48.8
BolC1t03432H Brassica oleracea HOM05D006774 ORTHO05D008411 2.4e-119 433.3 443 48.8
Ca_05814_v3 Cicer arietinum L. HOM05D006774 ORTHO05D008411 2.4e-119 433.3 424 54.0
BcaC09g49602 Brassica carinata HOM05D006774 ORTHO05D008411 4.2e-119 432.6 443 48.8
BcaB04g20150 Brassica carinata HOM05D006774 ORTHO05D008411 7.1e-119 431.8 439 49.9
Phvul.006G091800 Phaseolus vulgaris HOM05D006774 ORTHO05D008411 7.1e-119 431.8 398 56.3
CsaV3_1G038960 Cucumis sativus L. HOM05D006774 ORTHO05D008411 9.3e-119 431.4 393 53.9
CDE05G2690 Ceratophyllum demersum HOM05D006774 ORTHO05D008411 1.2e-118 431.0 409 52.3
AL1G65540 Arabidopsis lyrata HOM05D006774 ORTHO05D008411 4.6e-118 429.1 457 48.4
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 4.6e-118 429.1 493 48.1
BraA01t02861Z Brassica rapa HOM05D006774 ORTHO05D008411 1.0e-117 427.9 493 45.8
Lj1g0013332 Lotus japonicus HOM05D006774 ORTHO05D008411 1.0e-117 427.9 426 51.2
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 3.0e-117 426.4 431 49.0
Lj9C83T13 Lonicera japonica HOM05D006774 ORTHO05D008411 5.1e-117 425.6 359 57.7
A01p27210 Brassica napus HOM05D006774 ORTHO05D008411 6.7e-117 425.2 493 45.6
Haze_04191 Corylus avellana HOM05D006774 ORTHO05D008411 8.2e-115 418.3 421 51.5
Lj9C82T10 Lonicera japonica HOM05D006774 ORTHO05D008411 1.1e-114 417.9 345 58.6
AT1G54990 Arabidopsis thaliana HOM05D006774 ORTHO05D008411 1.4e-114 417.5 392 52.6
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 2.4e-114 416.8 440 52.5
RhsimUnG0226700 Rhododendron simsii HOM05D006774 ORTHO05D008411 2.4e-114 416.8 354 58.2
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 4.0e-114 416.0 413 55.7
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 1.5e-113 414.1 491 49.1
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 1.5e-113 414.1 436 50.0
vmacro05013 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 2.6e-113 413.3 357 57.4
vmacro23279 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 2.6e-113 413.3 357 57.4
HanXRQChr11g0338551 Helianthus annuus HOM05D006774 ORTHO05D008411 3.4e-113 412.9 401 52.4
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 1.0e-112 411.4 385 52.7
COL.COLO4_13460 Corchorus olitorius HOM05D006774 ORTHO05D008411 6.5e-112 408.7 347 57.1
AUR62000820 Chenopodium quinoa HOM05D006774 ORTHO05D008411 8.4e-112 408.3 400 51.8
Lj9C84T1 Lonicera japonica HOM05D006774 ORTHO05D008411 7.9e-110 401.7 332 58.1
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 3.9e-109 399.4 356 60.1
PSO478G2742 Papaver somniferum HOM05D006774 ORTHO05D008411 5.3e-106 389.0 339 63.4
Sabra13G0023900 Salix brachista HOM05D006774 ORTHO05D008411 1.4e-101 374.4 467 45.8
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 2.9e-96 356.7 355 53.2
Psat0s3041g0040 Pisum sativum HOM05D006774 ORTHO05D008411 1.6e-94 350.9 360 48.9
ECA236G1211 Erigeron canadensis HOM05D000208 ORTHO05D000130 6.1e-94 349.0 314 53.5
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 1.0e-93 348.2 349 54.2
Dinv40294 Davidia involucrata HOM05D006774 ORTHO05D008411 4.4e-92 342.8 274 61.3
PSO782G1046 Papaver somniferum HOM05D006774 ORTHO05D008411 1.4e-85 321.2 297 60.6
AUR62005151 Chenopodium quinoa HOM05D006774 ORTHO05D008411 1.8e-85 320.9 274 58.8
unitig_736.g22755 Utricularia gibba HOM05D006774 ORTHO05D008411 2.9e-72 276.9 448 35.9
Actinidia05698 Actinidia chinensis HOM05D006774 ORTHO05D008411 1.9e-63 247.7 182 63.7
Pp3c11_22860 Physcomitrium patens HOM05D006774 ORTHO05D008411 2.5e-63 247.3 435 33.6
Os11g0544100 Oryza sativa ssp. japonica HOM05D006774 ORTHO05D008411 1.6e-62 244.6 397 36.5
Zm00001eb197590 Zea mays HOM05D006774 ORTHO05D008411 9.5e-55 218.8 368 35.1
Atru.chr12.689 Acer truncatum HOM05D006774 ORTHO05D008411 3.4e-44 183.7 198 48.5
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 3.4e-44 183.7 493 31.4
SMO145G0196 Selaginella moellendorffii HOM05D006774 ORTHO05D008411 3.9e-40 170.2 385 30.4
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 4.0e-37 160.2 181 47.0
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 8.9e-37 159.1 174 52.3
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 9.9e-36 155.6 174 46.6
HPP92_006104 Vanilla planifolia HOM05D006774 ORTHO05D008411 1.2e-30 138.7 176 42.6
Oeu035485.2 Olea europaea HOM05D006774 ORTHO05D001341 1.9e-15 88.2 130 44.6
TAR362G0529 Trochodendron aralioides HOM05D006774 ORTHO05D008411 4.6e-09 67.0 54 61.1
VMungo1127G0243 Vigna mungo HOM05D006774 ORTHO05D008411 6.0e-09 66.6 59 57.6
Nitab4.5_0010934g0020 Nicotiana tabacum HOM05D006774 ORTHO05D008411 3.9e-08 63.9 65 46.2
Nn3g21217 Nelumbo nucifera HOM05D006774 ORTHO05D008411 1.1e-07 62.4 42 69.0
vmacro23280 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 7.4e-07 59.7 87 54.0
vmacro05012 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 1.6e-06 58.5 87 52.9
CSS0005750 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 6.2e-06 56.6 82 57.3


User provided reference genes

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