Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4818 Papaver somniferum HOM05D004727 ORTHO05D005788 9.5e-189 663.3 324 100.0
PSO782G5178 Papaver somniferum HOM05D004727 ORTHO05D005788 9.6e-173 610.1 324 92.0
Aqoxy7G00234 Aquilegia oxysepala HOM05D004727 ORTHO05D005788 3.0e-110 402.5 312 63.8
Psat0ss29864g0280 Pisum sativum HOM05D004727 ORTHO05D005788 2.7e-106 389.4 309 61.5
Ca_23692_v3 Cicer arietinum L. HOM05D004727 ORTHO05D005788 6.5e-105 384.8 321 60.1
HanXRQChr12g0381081 Helianthus annuus HOM05D004727 ORTHO05D005788 6.5e-105 384.8 307 61.9
MD01G1208600 Malus domestica HOM05D004727 ORTHO05D005788 8.5e-105 384.4 309 61.5
Potri.004G073700 Populus trichocarpa HOM05D004727 ORTHO05D005788 1.9e-104 383.3 315 60.3
Nn1g01641 Nelumbo nucifera HOM05D004727 ORTHO05D005788 5.5e-104 381.7 319 58.6
TPR.G33517 Trifolium pratense HOM05D004727 ORTHO05D005788 2.1e-103 379.8 322 58.4
Lsat_1_v5_gn_9_56621 Lactuca sativa HOM05D004727 ORTHO05D005788 2.7e-103 379.4 314 60.5
Lalb_Chr03g0034881 Lupinus albus HOM05D004727 ORTHO05D005788 5.2e-102 375.2 322 57.1
CSS0032352 Camellia sinensis var. sinensis HOM05D004727 ORTHO05D005788 6.8e-102 374.8 306 58.5
Atru.chr1.354 Acer truncatum HOM05D004727 ORTHO05D005788 1.2e-101 374.0 293 58.7
ECA232G4896 Erigeron canadensis HOM05D004727 ORTHO05D005788 2.6e-101 372.9 295 61.7
Eucgr.A02736 Eucalyptus grandis HOM05D004727 ORTHO05D005788 2.6e-101 372.9 290 60.7
GSVIVG01028857001 Vitis vinifera HOM05D004727 ORTHO05D005788 3.4e-101 372.5 316 58.2
vmacro09814 Vaccinium macrocarpon HOM05D004727 ORTHO05D005788 5.7e-101 371.7 335 56.7
Cfa016290 Carpinus fangiana HOM05D002238 ORTHO05D007272 9.8e-101 370.9 317 57.4
RcHm_v2.0_Chr1g0378381 Rosa chinensis HOM05D004727 ORTHO05D005788 9.8e-101 370.9 302 59.9
Prupe.2G301200 Prunus persica HOM05D004727 ORTHO05D005788 1.3e-100 370.5 302 61.3
Gorai.007G013000 Gossypium raimondii HOM05D004727 ORTHO05D005788 4.8e-100 368.6 314 55.7
CAN.G126.29 Capsicum annuum HOM05D004727 ORTHO05D005788 1.4e-99 367.1 317 56.8
Gohir.A11G012400 Gossypium hirsutum HOM05D004727 ORTHO05D005788 1.4e-99 367.1 327 56.0
Gohir.D11G011600 Gossypium hirsutum HOM05D004727 ORTHO05D005788 1.4e-99 367.1 314 55.4
unitig_0.g2469 Utricularia gibba HOM05D004727 ORTHO05D005788 1.4e-99 367.1 251 65.3
FvH4_7g30250 Fragaria vesca HOM05D004727 ORTHO05D005788 1.8e-99 366.7 320 57.5
FAN03G1377 Fragaria x ananassa HOM05D004727 ORTHO05D005788 3.1e-99 365.9 319 55.8
Potri.017G146200 Populus trichocarpa HOM05D004727 ORTHO05D005788 3.1e-99 365.9 315 57.1
FAN10G1092 Fragaria x ananassa HOM05D004727 ORTHO05D005788 4.1e-99 365.5 316 57.3
FAN10G3700 Fragaria x ananassa HOM05D004727 ORTHO05D005788 4.1e-99 365.5 316 57.3
Duzib205G1763 Durio zibethinus HOM05D004727 ORTHO05D005788 7.0e-99 364.8 314 55.7
Manes.06G152500 Manihot esculenta HOM05D004727 ORTHO05D005788 9.1e-99 364.4 314 56.4
Cc02_g02360 Coffea canephora HOM05D004727 ORTHO05D005788 1.2e-98 364.0 316 56.3
Medtr0057s0080 Medicago truncatula HOM05D004727 ORTHO05D005788 1.2e-98 364.0 319 56.4
Solyc03g007900.3 Solanum lycopersicum HOM05D004727 ORTHO05D005788 1.2e-98 364.0 317 55.5
Phvul.004G107900 Phaseolus vulgaris HOM05D004727 ORTHO05D005788 1.6e-98 363.6 309 58.9
CsaV3_3G017470 Cucumis sativus L. HOM05D004727 ORTHO05D005788 2.7e-98 362.8 318 57.5
Glyma.09G131600 Glycine max HOM05D004727 ORTHO05D005788 2.7e-98 362.8 308 59.1
C01p21250 Brassica napus HOM05D004727 ORTHO05D005788 3.5e-98 362.5 312 56.7
MSTRG.8711 Avicennia marina HOM05D004727 ORTHO05D005788 4.5e-98 362.1 319 55.8
Nitab4.5_0008522g0010 Nicotiana tabacum HOM05D004727 ORTHO05D005788 4.5e-98 362.1 317 56.2
Oeu061663.1 Olea europaea HOM05D004727 ORTHO05D005788 4.5e-98 362.1 317 55.8
Gohir.D08G109400 Gossypium hirsutum HOM05D004727 ORTHO05D005788 5.9e-98 361.7 289 58.8
Lj2g0018940 Lotus japonicus HOM05D004727 ORTHO05D005788 5.9e-98 361.7 320 56.2
Sopen03g003850 Solanum pennellii HOM05D004727 ORTHO05D005788 5.9e-98 361.7 317 55.2
CARHR233170 Cardamine hirsuta HOM05D004727 ORTHO05D005788 1.0e-97 360.9 302 59.3
Gohir.A08G085600 Gossypium hirsutum HOM05D004727 ORTHO05D005788 1.0e-97 360.9 248 64.1
Gorai.004G117100 Gossypium raimondii HOM05D004727 ORTHO05D005788 1.0e-97 360.9 248 64.5
Sed0015096 Sechium edule HOM05D004727 ORTHO05D005788 1.0e-97 360.9 319 57.7
Aa31sc163G30 Aethionema arabicum HOM05D004727 ORTHO05D005788 1.3e-97 360.5 318 57.9
Peaxi162Scf00444g00244 Petunia axillaris HOM05D004727 ORTHO05D005788 1.3e-97 360.5 349 52.1
BolC1t02052H Brassica oleracea HOM05D004727 ORTHO05D005788 1.7e-97 360.1 318 56.9
Rhsim09G0200700 Rhododendron simsii HOM05D004727 ORTHO05D005788 1.7e-97 360.1 357 52.4
A01p16970 Brassica napus HOM05D004727 ORTHO05D005788 2.9e-97 359.4 314 56.7
Lalb_Chr19g0130641 Lupinus albus HOM05D004727 ORTHO05D005788 3.8e-97 359.0 294 59.5
ATR0661G169 Amborella trichopoda HOM05D004727 ORTHO05D005788 6.6e-97 358.2 231 70.1
FAN06G4134 Fragaria x ananassa HOM05D004727 ORTHO05D005788 1.5e-96 357.1 334 55.1
Thhalv10025771m.g Eutrema salsugineum HOM05D004727 ORTHO05D005788 1.9e-96 356.7 288 60.1
FAN06G0456 Fragaria x ananassa HOM05D004727 ORTHO05D005788 1.9e-96 356.7 334 54.8
VMungo0464G1912 Vigna mungo HOM05D004727 ORTHO05D005788 1.9e-96 356.7 309 56.0
BraA01t01653Z Brassica rapa HOM05D004727 ORTHO05D005788 2.5e-96 356.3 314 56.1
PGR042G1629 Punica granatum HOM05D004727 ORTHO05D005788 2.5e-96 356.3 248 66.9
unitig_52.g17730 Utricularia gibba HOM05D004727 ORTHO05D005788 7.2e-96 354.8 248 64.1
Sp7g23750 Schrenkiella parvula HOM05D004727 ORTHO05D005788 9.5e-96 354.4 310 56.5
Haze_00047 Corylus avellana HOM05D004727 ORTHO05D005788 1.2e-95 354.0 348 52.3
Glyma.16G178900 Glycine max HOM05D004727 ORTHO05D005788 1.6e-95 353.6 308 55.5
Actinidia03138 Actinidia chinensis HOM05D004727 ORTHO05D005788 2.8e-95 352.8 294 59.5
Carub.0007s1524 Capsella rubella HOM05D004727 ORTHO05D005788 2.8e-95 352.8 284 60.2
COL.COLO4_30213 Corchorus olitorius HOM05D004727 ORTHO05D005788 6.1e-95 351.7 305 54.1
Thecc.03G184500 Theobroma cacao HOM05D004727 ORTHO05D005788 6.1e-95 351.7 316 54.7
Sabra04G0048400 Salix brachista HOM05D004727 ORTHO05D005788 1.8e-94 350.1 320 56.6
AL7G27320 Arabidopsis lyrata HOM05D004727 ORTHO05D005788 2.3e-94 349.7 285 60.7
Medtr0057s0130 Medicago truncatula HOM05D004727 ORTHO05D005788 8.9e-94 347.8 279 61.6
Migut.F00289 Erythranthe guttata HOM05D004727 ORTHO05D005788 1.2e-93 347.4 252 62.3
Sc25g0000700 Simmondsia chinensis HOM05D004727 ORTHO05D005788 2.6e-93 346.3 248 62.5
Glyma.09G131900 Glycine max HOM05D004727 ORTHO05D005788 2.2e-92 343.2 302 56.0
EL10Ac3g05418 Beta vulgaris HOM05D004727 ORTHO05D005788 2.8e-92 342.8 319 54.5
SalBow4G1885 Salvia bowleyana HOM05D004727 ORTHO05D005788 2.8e-92 342.8 375 48.3
HanXRQChr05g0130171 Helianthus annuus HOM05D004727 ORTHO05D005788 3.7e-92 342.4 250 62.4
CDE11G0547 Ceratophyllum demersum HOM05D004727 ORTHO05D005788 4.9e-92 342.0 305 56.7
ClCG05G008410 Citrullus lanatus HOM05D004727 ORTHO05D005788 4.9e-92 342.0 352 52.3
Nitab4.5_0000084g0450 Nicotiana tabacum HOM05D004727 ORTHO05D005788 1.1e-91 340.9 366 48.6
Os06g0103700 Oryza sativa ssp. japonica HOM05D004727 ORTHO05D005788 1.1e-91 340.9 238 63.4
HPP92_025470 Vanilla planifolia HOM05D004727 ORTHO05D005788 4.5e-90 335.5 310 53.5
MELO3C006936.2 Cucumis melo HOM05D004727 ORTHO05D005788 1.3e-89 334.0 319 55.2
Glyma.09G131800 Glycine max HOM05D004727 ORTHO05D005788 1.3e-89 334.0 282 57.4
Phvul.004G108600 Phaseolus vulgaris HOM05D004727 ORTHO05D005788 3.9e-89 332.4 280 57.1
VMungo0464G2071 Vigna mungo HOM05D004727 ORTHO05D005788 6.6e-89 331.6 278 57.2
CANSAT21G0167 Cannabis sativa HOM05D004727 ORTHO05D005788 1.1e-88 330.9 315 52.4
CANSAT21G2173 Cannabis sativa HOM05D004727 ORTHO05D005788 1.1e-88 330.9 315 52.4
Hund04788 Selenicereus undatus HOM05D004727 ORTHO05D005788 1.5e-88 330.5 274 56.6
Ah.06g181400 Amaranthus hybridus HOM05D004727 ORTHO05D005788 1.6e-87 327.0 247 59.9
Nitab4.5_0000084g0460 Nicotiana tabacum HOM05D004727 ORTHO05D005788 1.6e-87 327.0 272 57.0
CiPaw.05G262100 Carya illinoinensis HOM05D004727 ORTHO05D005788 6.1e-87 325.1 230 62.6
Manes.06G152600 Manihot esculenta HOM05D004727 ORTHO05D005788 1.0e-86 324.3 286 56.6
Nitab4.5_0008522g0030 Nicotiana tabacum HOM05D004727 ORTHO05D005788 1.0e-86 324.3 234 62.4
Duzib068G1006 Durio zibethinus HOM05D004727 ORTHO05D005788 1.4e-86 323.9 283 54.1
Hund11719 Selenicereus undatus HOM05D004727 ORTHO05D005788 1.4e-86 323.9 322 52.2
SEGI_23205 Sequoiadendron giganteum HOM05D004727 ORTHO05D005788 2.3e-86 323.2 311 52.4
Solyc03g007920.4 Solanum lycopersicum HOM05D004727 ORTHO05D005788 3.1e-86 322.8 232 62.5
AT4G25720 Arabidopsis thaliana HOM05D004727 ORTHO05D005788 6.8e-86 321.6 274 58.8
Dinv35254 Davidia involucrata HOM05D004727 ORTHO05D005788 1.2e-85 320.9 201 73.6
AUR62021119 Chenopodium quinoa HOM05D004727 ORTHO05D005788 1.5e-85 320.5 323 52.6
PGSC0003DMG400009500 Solanum tuberosum HOM05D004727 ORTHO05D005788 4.4e-85 318.9 285 53.0
SGA_v2.0_scaffold60G21112 Striga asiatica HOM05D004727 ORTHO05D005788 9.8e-85 317.8 314 52.9
Sopen03g003870 Solanum pennellii HOM05D004727 ORTHO05D005788 1.3e-84 317.4 285 53.3
CAN.G126.24 Capsicum annuum HOM05D004727 ORTHO05D005788 1.7e-84 317.0 270 56.3
AUR62031423 Chenopodium quinoa HOM05D004727 ORTHO05D005788 1.6e-82 310.5 321 51.4
Lalb_Chr19g0130651 Lupinus albus HOM05D004727 ORTHO05D005788 3.5e-82 309.3 258 56.2
Cpa.g.sc107.111 Carica papaya HOM05D004727 ORTHO05D005788 7.3e-80 301.6 343 47.2
arahy.Tifrunner.gnm1.ann1.G1I5XM Arachis hypogaea HOM05D004727 ORTHO05D005788 1.6e-79 300.4 287 51.9
HPP92_025401 Vanilla planifolia HOM05D004727 ORTHO05D005788 1.6e-79 300.4 213 64.3
EL10Ac4g07582 Beta vulgaris HOM05D004727 ORTHO05D005788 1.7e-76 290.4 361 44.0
SMO351G0007 Selaginella moellendorffii HOM05D004727 ORTHO05D005788 3.9e-73 279.3 267 50.9
Pp3c10_5500 Physcomitrium patens HOM05D004727 ORTHO05D005788 1.6e-71 273.9 229 55.0
Mapoly0062s0028 Marchantia polymorpha HOM05D004727 ORTHO05D005788 2.1e-71 273.5 229 55.5
AUR62036451 Chenopodium quinoa HOM05D004727 ORTHO05D005788 8.9e-70 268.1 236 54.7
MSTRG.27085 Avicennia marina HOM05D004727 ORTHO05D005788 5.8e-69 265.4 190 62.6
arahy.Tifrunner.gnm1.ann1.NE53A1 Arachis hypogaea HOM05D004727 ORTHO05D005788 4.9e-68 262.3 324 46.0
CBR_g3311 Chara braunii HOM05D004727 ORTHO05D005788 3.2e-67 259.6 232 52.2
CBR_g3313 Chara braunii HOM05D004727 ORTHO05D005788 3.2e-67 259.6 232 52.2
Ciclev10005858m.g Citrus clementina HOM05D004727 ORTHO05D005788 8.6e-65 251.5 199 59.3
CBR_g727 Chara braunii HOM05D004727 ORTHO05D005788 3.6e-63 246.1 232 50.4
AUR62017096 Chenopodium quinoa HOM05D004727 ORTHO05D005788 6.2e-63 245.4 211 55.9
FAN03G2629 Fragaria x ananassa HOM05D004727 ORTHO05D005788 5.8e-61 238.8 216 54.2
Zm00001eb268480 Zea mays HOM05D004727 ORTHO05D005788 5.1e-57 225.7 200 54.5
MBI12_g08716_MAGBIO Magnolia biondii HOM05D004727 ORTHO05D005788 9.6e-56 221.5 198 57.6
QL09p012782 Quercus lobata HOM05D004727 ORTHO05D005788 1.8e-54 217.2 154 61.0
Cre11.g476150 Chlamydomonas reinhardtii HOM05D004727 ORTHO05D005788 5.3e-54 215.7 291 38.8
Peaxi162Scf00444g00021 Petunia axillaris HOM05D004727 ORTHO05D005788 4.9e-52 209.1 213 50.2
SMO231G0015 Selaginella moellendorffii HOM05D004727 ORTHO05D005788 1.4e-51 207.6 193 52.8
Actinidia31840 Actinidia chinensis HOM05D004727 ORTHO05D005788 1.6e-50 204.1 140 65.0
Ah.13g069160 Amaranthus hybridus HOM05D004727 ORTHO05D005788 3.5e-50 203.0 161 57.8
DCAR_024607 Daucus carota HOM05D004727 ORTHO05D005788 4.3e-48 196.1 161 59.0
AUR62036407 Chenopodium quinoa HOM05D004727 ORTHO05D005788 3.1e-46 189.9 212 46.2
MCO01G501 Micromonas commoda HOM05D004727 ORTHO05D005788 3.1e-46 189.9 237 39.2
DCAR_008880 Daucus carota HOM05D001628 ORTHO05D001568 1.6e-42 177.6 116 68.1
PRCOL_00002776 Prasinoderma coloniale HOM05D004727 ORTHO05D005788 6.0e-42 175.6 300 35.7
AagrBONN_evm.TU.Sc2ySwM_344.2696 Anthoceros agrestis HOM05D004727 ORTHO05D005788 4.3e-40 169.5 132 57.6
SEGI_30519 Sequoiadendron giganteum HOM05D004727 ORTHO05D005788 3.9e-33 146.4 108 60.2
Actinidia31841 Actinidia chinensis HOM05D004727 ORTHO05D005788 5.1e-33 146.0 162 50.0
arahy.Tifrunner.gnm1.ann1.FZN7A9 Arachis hypogaea HOM05D004727 ORTHO05D005788 2.8e-31 140.2 196 38.8
EL10Ac4g07580 Beta vulgaris HOM05D004727 ORTHO05D005788 1.9e-27 127.5 150 44.7
QL09p012777 Quercus lobata HOM05D004727 ORTHO05D005788 1.3e-25 121.3 149 49.7
FAN01G2810 Fragaria x ananassa HOM05D000427 ORTHO05D000386 7.4e-24 115.5 134 48.5
SHI13754 Sapria himalayana HOM05D004727 ORTHO05D005788 1.7e-20 104.4 110 49.1
SEGI_06548 Sequoiadendron giganteum HOM05D004727 ORTHO05D005788 6.5e-20 102.4 75 58.7
Ciclev10006767m.g Citrus clementina HOM05D004727 ORTHO05D005788 6.1e-18 95.9 60 70.0
ECA233G3504 Erigeron canadensis HOM05D004727 ORTHO05D005788 8.8e-17 92.0 141 40.4
Mapoly1114s0001 Marchantia polymorpha HOM05D004727 ORTHO05D005788 8.8e-17 92.0 72 55.6
TWI39G0716 Tripterygium wilfordii HOM05D001943 ORTHO05D001969 4.3e-16 89.7 72 56.9
MD14G1086700 Malus domestica HOM05D004727 ORTHO05D005788 6.5e-12 75.9 82 53.7
Ah.13g069170 Amaranthus hybridus HOM05D004727 ORTHO05D005788 1.1e-11 75.1 107 45.8
Medtr4g012780 Medicago truncatula HOM05D004727 ORTHO05D005788 7.9e-10 68.9 36 80.6
Hund04787 Selenicereus undatus HOM05D021542 ORTHO05D383482 4.1e-06 56.6 43 53.5


User provided reference genes

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