Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4754 Papaver somniferum HOM05D004959 ORTHO05D005961 7.7e-112 407.1 202 100.0
PSO478G1937 Papaver somniferum HOM05D004959 ORTHO05D005961 7.7e-96 354.0 190 92.6
PSO017G0156 Papaver somniferum HOM05D004959 ORTHO05D005961 1.5e-91 339.7 200 85.0
Nn3g21093 Nelumbo nucifera HOM05D004959 ORTHO05D005961 1.3e-63 246.9 176 68.2
Aqoxy3G03508 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 8.6e-63 244.2 190 63.7
MBI07_g42017_MAGBIO Magnolia biondii HOM05D004959 ORTHO05D005961 1.5e-62 243.4 200 62.0
Aqoxy7G01840 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 2.8e-61 239.2 190 62.1
Aqoxy5G03195 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 3.6e-61 238.8 190 62.1
Sabra18G0102400 Salix brachista HOM05D004959 ORTHO05D005961 2.2e-58 229.6 203 57.6
Potri.018G118800 Populus trichocarpa HOM05D004959 ORTHO05D005961 1.9e-57 226.5 203 56.7
Thecc.02G004800 Theobroma cacao HOM05D004959 ORTHO05D005961 2.4e-57 226.1 204 58.3
Cfa000659 Carpinus fangiana HOM05D004959 ORTHO05D005961 5.4e-57 224.9 202 56.9
CDE04G0396 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 7.1e-57 224.6 169 63.9
Dinv06304 Davidia involucrata HOM05D004959 ORTHO05D005961 4.6e-56 221.9 190 56.3
Dinv04263 Davidia involucrata HOM05D004959 ORTHO05D005961 1.0e-55 220.7 190 55.8
QL04p014466 Quercus lobata HOM05D004959 ORTHO05D005961 1.3e-55 220.3 202 55.0
QL04p014830 Quercus lobata HOM05D004959 ORTHO05D005961 1.3e-55 220.3 202 55.0
TWI63G1138 Tripterygium wilfordii HOM05D004959 ORTHO05D005961 3.9e-55 218.8 205 56.6
GSVIVG01032944001 Vitis vinifera HOM05D004959 ORTHO05D005961 6.6e-55 218.0 203 57.1
Solyc02g064590.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 1.5e-54 216.9 193 56.0
Solyc02g064620.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 1.5e-54 216.9 193 56.0
Sopen02g014720 Solanum pennellii HOM05D004959 ORTHO05D005961 4.3e-54 215.3 193 55.4
Gohir.D12G047700 Gossypium hirsutum HOM05D004959 ORTHO05D005961 5.6e-54 214.9 202 55.0
PGSC0003DMG400003329 Solanum tuberosum HOM05D004959 ORTHO05D005961 7.3e-54 214.5 193 55.4
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 2.1e-53 213.0 198 55.1
Manes.16G050600 Manihot esculenta HOM05D004959 ORTHO05D005961 2.1e-53 213.0 178 59.6
CSS0018526 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 3.6e-53 212.2 176 59.1
Atru.chr8.667 Acer truncatum HOM05D004959 ORTHO05D005961 4.7e-53 211.8 175 62.9
Lsat_1_v5_gn_8_33541 Lactuca sativa HOM05D004959 ORTHO05D005961 6.2e-53 211.5 202 51.5
Phvul.004G026300 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 1.1e-52 210.7 184 56.5
VMungo0464G0163 Vigna mungo HOM05D004959 ORTHO05D005961 1.8e-52 209.9 184 56.0
CsaV3_5G015760 Cucumis sativus L. HOM05D004959 ORTHO05D005961 2.3e-52 209.5 184 58.2
Cpa.g.sc30.122 Carica papaya HOM05D004959 ORTHO05D005961 3.1e-52 209.1 202 54.5
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 5.2e-52 208.4 184 58.2
Sed0018634 Sechium edule HOM05D004959 ORTHO05D005961 6.8e-52 208.0 191 53.9
ATR0037G053 Amborella trichopoda HOM05D004959 ORTHO05D005961 8.9e-52 207.6 183 56.3
HPP92_024644 Vanilla planifolia HOM05D004959 ORTHO05D005961 1.2e-51 207.2 183 54.6
Gorai.008G050400 Gossypium raimondii HOM05D004959 ORTHO05D005961 1.5e-51 206.8 235 48.5
Cc04_g10880 Coffea canephora HOM05D004959 ORTHO05D005961 3.4e-51 205.7 193 55.4
Lj3A850G96 Lonicera japonica HOM05D004959 ORTHO05D005961 5.8e-51 204.9 179 57.0
Gohir.A12G049000 Gossypium hirsutum HOM05D004959 ORTHO05D005961 7.6e-51 204.5 235 48.5
COL.COLO4_18025 Corchorus olitorius HOM05D004959 ORTHO05D005961 9.9e-51 204.1 204 53.4
LjContig00564g0005363 Lotus japonicus HOM05D004959 ORTHO05D005961 1.7e-50 203.4 175 57.7
Lalb_Chr19g0135221 Lupinus albus HOM05D004959 ORTHO05D005961 2.2e-50 203.0 203 53.7
CAN.G370.71 Capsicum annuum HOM05D004959 ORTHO05D005961 3.7e-50 202.2 193 51.8
CiPaw.10G061900 Carya illinoinensis HOM05D004959 ORTHO05D005961 3.7e-50 202.2 202 51.0
Nitab4.5_0000036g0080 Nicotiana tabacum HOM05D004959 ORTHO05D005961 6.4e-50 201.4 193 51.8
Eucgr.I01567 Eucalyptus grandis HOM05D004959 ORTHO05D005961 8.3e-50 201.1 197 57.4
Phvul.005G124450 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 1.1e-49 200.7 174 56.9
BcaNung06192 Brassica carinata HOM05D004959 ORTHO05D005961 1.4e-49 200.3 178 55.6
Glyma.19G032700 Glycine max HOM05D004959 ORTHO05D005961 3.2e-49 199.1 184 53.3
LjContig00564g0005645 Lotus japonicus HOM05D004959 ORTHO05D005961 3.2e-49 199.1 186 55.9
HanXRQChr12g0366411 Helianthus annuus HOM05D004959 ORTHO05D005961 7.1e-49 198.0 202 50.0
Ca_18944_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.2e-48 197.2 184 55.4
MELO3C026444.2 Cucumis melo HOM05D004959 ORTHO05D005961 1.6e-48 196.8 184 54.9
Lj3g0004583 Lotus japonicus HOM05D004959 ORTHO05D005961 1.6e-48 196.8 175 56.6
PGR142G3977 Punica granatum HOM05D004959 ORTHO05D005961 1.6e-48 196.8 182 55.5
BolC1t01373H Brassica oleracea HOM05D004959 ORTHO05D005961 2.7e-48 196.1 203 50.2
ECA233G2209 Erigeron canadensis HOM05D004959 ORTHO05D005961 2.7e-48 196.1 204 49.5
LjContig00564g0002415 Lotus japonicus HOM05D004959 ORTHO05D005961 3.5e-48 195.7 186 55.4
Carub.0007s2107 Capsella rubella HOM05D004959 ORTHO05D005961 4.6e-48 195.3 207 50.2
BraA01t01128Z Brassica rapa HOM05D004959 ORTHO05D005961 6.0e-48 194.9 203 49.3
Peaxi162Scf00449g00321 Petunia axillaris HOM05D004959 ORTHO05D005961 6.0e-48 194.9 193 51.8
AT4G20060 Arabidopsis thaliana HOM05D004959 ORTHO05D005961 7.8e-48 194.5 203 50.7
Medtr4g078330 Medicago truncatula HOM05D004959 ORTHO05D005961 7.8e-48 194.5 184 54.3
CANSAT25G2352 Cannabis sativa HOM05D004959 ORTHO05D005961 1.0e-47 194.1 185 55.1
A01p11860 Brassica napus HOM05D004959 ORTHO05D005961 1.7e-47 193.4 178 52.8
Rhsim02G0134800 Rhododendron simsii HOM05D004959 ORTHO05D005961 1.7e-47 193.4 190 51.6
Prupe.3G104300 Prunus persica HOM05D004959 ORTHO05D005961 2.3e-47 193.0 203 50.2
EL10Ac2g04300 Beta vulgaris HOM05D004959 ORTHO05D005961 3.0e-47 192.6 186 52.7
Thhalv10024260m.g Eutrema salsugineum HOM05D004959 ORTHO05D005961 3.0e-47 192.6 203 48.8
vmacro15931 Vaccinium macrocarpon HOM05D004959 ORTHO05D005961 3.9e-47 192.2 200 51.5
C01p14060 Brassica napus HOM05D004959 ORTHO05D005961 5.1e-47 191.8 203 49.3
Actinidia07601 Actinidia chinensis HOM05D004959 ORTHO05D005961 8.6e-47 191.0 179 55.9
AL7G33790 Arabidopsis lyrata HOM05D004959 ORTHO05D005961 2.5e-46 189.5 203 48.3
Sp7g18520 Schrenkiella parvula HOM05D004959 ORTHO05D005961 2.5e-46 189.5 207 49.3
Psat7g167160 Pisum sativum HOM05D004959 ORTHO05D005961 3.3e-46 189.1 184 53.3
FAN12G3376 Fragaria x ananassa HOM05D004959 ORTHO05D005961 5.6e-46 188.3 203 49.3
FAN17G1136 Fragaria x ananassa HOM05D004959 ORTHO05D005961 1.2e-45 187.2 190 51.1
FvH4_4g05080 Fragaria vesca HOM05D004959 ORTHO05D005961 1.6e-45 186.8 203 48.8
Sc10g0002790 Simmondsia chinensis HOM05D004959 ORTHO05D005961 1.6e-45 186.8 200 52.0
SEGI_31831 Sequoiadendron giganteum HOM05D004959 ORTHO05D005961 2.8e-45 186.0 192 48.4
MD13G1224700 Malus domestica HOM05D004959 ORTHO05D005961 3.6e-45 185.7 183 51.4
FAN22G0965 Fragaria x ananassa HOM05D004959 ORTHO05D005961 4.7e-45 185.3 190 50.5
BcaNung06193 Brassica carinata HOM05D004959 ORTHO05D005961 8.1e-45 184.5 181 52.5
CARHR226870 Cardamine hirsuta HOM05D004959 ORTHO05D005961 1.1e-44 184.1 203 47.3
Aa31LG6G2470 Aethionema arabicum HOM05D004959 ORTHO05D005961 1.8e-44 183.3 185 49.2
Rhsim01G0101500 Rhododendron simsii HOM05D004959 ORTHO05D005961 1.8e-44 183.3 190 49.5
Nitab4.5_0010326g0010 Nicotiana tabacum HOM05D004959 ORTHO05D005961 5.2e-44 181.8 167 52.7
SHI28139 Sapria himalayana HOM05D004959 ORTHO05D005961 6.8e-44 181.4 179 52.5
TPR.G23000 Trifolium pratense HOM05D004959 ORTHO05D005961 6.8e-44 181.4 167 56.9
arahy.Tifrunner.gnm1.ann1.WXF40H Arachis hypogaea HOM05D004959 ORTHO05D005961 8.9e-44 181.0 206 48.1
Migut.E00705 Erythranthe guttata HOM05D004959 ORTHO05D005961 4.4e-43 178.7 190 48.9
RcHm_v2.0_Chr4g0396011 Rosa chinensis HOM05D004959 ORTHO05D005961 5.8e-43 178.3 190 48.4
AUR62022971 Chenopodium quinoa HOM05D004959 ORTHO05D005961 7.6e-43 177.9 183 51.9
arahy.Tifrunner.gnm1.ann1.C6XSUD Arachis hypogaea HOM05D004959 ORTHO05D005961 1.3e-42 177.2 172 52.3
Migut.E00612 Erythranthe guttata HOM05D004959 ORTHO05D005961 2.9e-42 176.0 176 52.8
Ah.09g226960 Amaranthus hybridus HOM05D004959 ORTHO05D005961 1.9e-41 173.3 176 52.8
AUR62012329 Chenopodium quinoa HOM05D004959 ORTHO05D005961 2.4e-41 172.9 183 51.4
DCAR_026905 Daucus carota HOM05D004959 ORTHO05D005961 7.1e-41 171.4 190 46.8
SGA_v2.0_scaffold99G29470 Striga asiatica HOM05D004959 ORTHO05D005961 7.1e-41 171.4 190 48.9
SGA_v2.0_scaffold36G14263 Striga asiatica HOM05D004959 ORTHO05D005961 3.5e-40 169.1 190 48.9
BcaB03g11657 Brassica carinata HOM05D004959 ORTHO05D005961 9.6e-38 161.0 218 42.7
Oeu021359.1 Olea europaea HOM05D004959 ORTHO05D005961 5.8e-35 151.8 165 48.5
unitig_46.g18488 Utricularia gibba HOM05D004959 ORTHO05D005961 1.7e-34 150.2 173 43.9
MD16G1229900 Malus domestica HOM05D004959 ORTHO05D005961 2.2e-34 149.8 190 44.2
Pp3c21_2460 Physcomitrium patens HOM05D004959 ORTHO05D005961 3.2e-33 146.0 181 39.8
Mapoly0306s0002 Marchantia polymorpha HOM05D004959 ORTHO05D005961 9.3e-33 144.4 232 35.8
HanXRQChr04g0121291 Helianthus annuus HOM05D004959 ORTHO05D005961 2.7e-32 142.9 124 54.8
Zm00001eb126950 Zea mays HOM05D004959 ORTHO05D005961 1.3e-31 140.6 199 38.7
AagrBONN_evm.TU.Sc2ySwM_228.5373 Anthoceros agrestis HOM05D004959 ORTHO05D005961 9.6e-30 134.4 184 40.8
SMO111G0127 Selaginella moellendorffii HOM05D004959 ORTHO05D005961 2.4e-25 119.8 178 37.1
CBR_g16049 Chara braunii HOM05D004959 ORTHO05D005961 1.6e-21 107.1 193 32.6
Duzib248G0683 Durio zibethinus HOM05D004959 ORTHO05D005961 2.4e-20 103.2 117 50.4
Ca_14573_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 2.0e-19 100.1 104 51.9
Ca_14572_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 3.4e-19 99.4 105 51.4
Os01g0188200 Oryza sativa ssp. japonica HOM05D004959 ORTHO05D005961 4.5e-19 99.0 193 31.6
Ca_14567_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 9.6e-14 81.3 85 54.1
Haze_06165 Corylus avellana HOM05D004959 ORTHO05D005961 5.8e-11 72.0 52 63.5


User provided reference genes

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