Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 2.4e-73 278.9 151 100.0
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 1.1e-70 270.0 151 98.0
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 1.6e-42 176.4 150 66.7
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 3.7e-42 175.3 137 71.5
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 1.1e-41 173.7 150 64.7
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 6.9e-41 171.0 136 66.9
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 6.9e-41 171.0 139 68.3
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 1.2e-40 170.2 151 62.9
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 1.5e-40 169.9 136 66.2
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 1.5e-40 169.9 125 71.2
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 1.5e-40 169.9 125 71.2
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 2.0e-40 169.5 151 63.6
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 2.0e-40 169.5 146 62.3
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 4.5e-40 168.3 124 71.8
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 5.9e-40 167.9 164 58.5
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 7.6e-40 167.5 124 71.8
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 7.6e-40 167.5 112 75.9
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 7.6e-40 167.5 155 61.3
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 1.7e-39 166.4 111 75.7
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 1.7e-39 166.4 129 69.0
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 1.7e-39 166.4 135 65.9
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 2.2e-39 166.0 124 71.0
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 2.2e-39 166.0 124 71.0
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 3.8e-39 165.2 150 62.7
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 6.5e-39 164.5 151 62.9
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 1.9e-38 162.9 118 71.2
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 1.9e-38 162.9 148 62.8
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 1.9e-38 162.9 153 61.4
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 2.5e-38 162.5 160 60.0
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 2.5e-38 162.5 124 69.4
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 7.2e-38 161.0 152 61.8
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 9.3e-38 160.6 142 62.7
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 1.2e-37 160.2 144 62.5
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 1.6e-37 159.8 148 62.2
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 1.6e-37 159.8 112 71.4
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 3.6e-37 158.7 142 62.0
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 4.6e-37 158.3 151 59.6
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 1.0e-36 157.1 133 65.4
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 1.0e-36 157.1 131 64.1
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 1.8e-36 156.4 152 59.2
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.8e-36 156.4 169 57.4
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.8e-36 156.4 169 57.4
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 6.7e-36 154.5 135 61.5
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 3.3e-35 152.1 155 58.1
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 5.7e-35 151.4 150 57.3
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 7.4e-35 151.0 122 65.6
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 7.4e-35 151.0 145 60.0
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 2.2e-34 149.4 129 65.1
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 2.8e-34 149.1 150 56.0
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 4.8e-34 148.3 110 69.1
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 4.8e-34 148.3 147 57.1
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 6.3e-34 147.9 116 66.4
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 8.2e-34 147.5 143 56.6
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 1.8e-33 146.4 151 58.3
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 1.8e-33 146.4 151 58.3
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 2.4e-33 146.0 110 71.8
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 2.4e-33 146.0 122 63.1
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 2.4e-33 146.0 111 69.4
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 3.1e-33 145.6 126 65.1
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 3.1e-33 145.6 118 66.1
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 3.1e-33 145.6 135 61.5
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 5.3e-33 144.8 112 67.9
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 6.9e-33 144.4 128 62.5
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 6.9e-33 144.4 108 65.7
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 9.1e-33 144.1 145 57.2
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 9.1e-33 144.1 117 65.8
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 1.2e-32 143.7 138 59.4
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 1.5e-32 143.3 129 62.8
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 2.0e-32 142.9 112 67.0
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 2.0e-32 142.9 112 67.0
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 2.6e-32 142.5 158 54.4
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 5.9e-32 141.4 139 58.3
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 5.9e-32 141.4 139 58.3
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 5.9e-32 141.4 127 63.0
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 5.9e-32 141.4 127 61.4
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 7.7e-32 141.0 123 63.4
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 1.7e-31 139.8 147 54.4
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 8.5e-31 137.5 128 58.6
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 1.1e-30 137.1 150 55.3
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 1.1e-30 137.1 150 55.3
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.4e-30 136.7 128 58.6
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.4e-30 136.7 90 75.6
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 3.2e-30 135.6 103 65.0
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 4.2e-30 135.2 128 59.4
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 5.5e-30 134.8 109 61.5
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 1.6e-29 133.3 119 61.3
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 1.6e-29 133.3 119 61.3
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 1.6e-29 133.3 102 69.6
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 2.7e-29 132.5 111 60.4
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 3.6e-29 132.1 124 58.1
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 6.1e-29 131.3 114 61.4
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 1.0e-28 130.6 98 70.4
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 6.7e-28 127.9 91 69.2
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 8.8e-28 127.5 111 64.9
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 1.1e-27 127.1 113 59.3
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 2.0e-27 126.3 106 64.2
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 2.0e-27 126.3 135 52.6
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 2.2e-26 122.9 90 65.6
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 3.7e-26 122.1 103 60.2
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 1.8e-25 119.8 150 52.0
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 4.1e-25 118.6 117 57.3
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 4.5e-24 115.2 99 61.6
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 2.5e-22 109.4 95 64.2
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 3.2e-22 109.0 83 63.9
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 5.5e-22 108.2 100 56.0
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 7.2e-22 107.8 150 44.7
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 2.7e-21 105.9 99 60.6
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 2.7e-21 105.9 120 50.0
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 8.8e-20 100.9 152 46.1
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 3.3e-19 99.0 122 50.8
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 7.4e-19 97.8 68 69.1
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 1.3e-18 97.1 115 50.4
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 4.8e-18 95.1 99 48.5
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 2.4e-17 92.8 92 57.6
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 3.1e-17 92.4 55 81.8
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 2.0e-16 89.7 84 54.8
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 7.2e-14 81.3 98 54.1
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 7.2e-14 81.3 70 57.1
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 7.2e-14 81.3 114 45.6
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 8.0e-13 77.8 93 51.6
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 3.0e-12 75.9 56 66.1
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 8.8e-12 74.3 66 57.6
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 4.4e-11 72.0 85 43.5
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 4.4e-11 72.0 85 43.5
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 9.7e-11 70.9 68 57.4
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 1.7e-10 70.1 68 57.4
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 2.2e-10 69.7 46 73.9
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 1.7e-07 60.1 57 56.1
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 1.7e-07 60.1 57 56.1
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 1.7e-07 60.1 57 56.1
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 6.5e-07 58.2 57 54.4
BcaC08g44430 Brassica carinata HOM05D000522 ORTHO05D021960 3.2e-06 55.8 58 51.7


User provided reference genes

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