Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4661 Papaver somniferum HOM05D005390 ORTHO05D007086 0.0e+00 1266.1 653 100.0
PSO017G5335 Papaver somniferum HOM05D005390 ORTHO05D007086 0.0e+00 1218.0 635 98.7
TAR374G1738 Trochodendron aralioides HOM05D005390 ORTHO05D007086 2.5e-252 875.5 622 72.8
Aqoxy3G01354 Aquilegia oxysepala HOM05D005390 ORTHO05D007086 3.2e-244 848.6 631 69.1
Nn4g22507 Nelumbo nucifera HOM05D005390 ORTHO05D007086 5.3e-239 831.2 635 69.4
Rhsim08G0183100 Rhododendron simsii HOM05D005390 ORTHO05D007086 6.7e-226 787.7 617 65.6
Dinv38486 Davidia involucrata HOM05D005390 ORTHO05D007086 8.8e-226 787.3 536 73.1
GSVIVG01007574001 Vitis vinifera HOM05D005390 ORTHO05D007086 3.3e-225 785.4 628 66.4
TWI09G0451 Tripterygium wilfordii HOM05D005390 ORTHO05D007086 1.8e-223 779.6 626 65.5
PGSC0003DMG400027069 Solanum tuberosum HOM05D005390 ORTHO05D007086 3.1e-223 778.9 625 64.2
vmacro19255 Vaccinium macrocarpon HOM05D005390 ORTHO05D007086 3.1e-223 778.9 670 61.5
Solyc06g071850.3 Solanum lycopersicum HOM05D005390 ORTHO05D007086 1.6e-222 776.5 625 64.0
TWI39G0214 Tripterygium wilfordii HOM05D005390 ORTHO05D007086 3.5e-222 775.4 623 65.2
Cfa018904 Carpinus fangiana HOM05D005390 ORTHO05D007086 1.0e-221 773.9 627 64.9
Sopen06g028130 Solanum pennellii HOM05D005390 ORTHO05D007086 1.7e-221 773.1 627 63.5
Peaxi162Scf00763g00330 Petunia axillaris HOM05D005390 ORTHO05D007086 2.5e-220 769.2 625 64.2
Hma1.2p1_0983F.1_g244080 Hydrangea macrophylla HOM05D005390 ORTHO05D007086 3.2e-220 768.8 546 71.2
Glyma.04G191600 Glycine max HOM05D005390 ORTHO05D007086 4.2e-220 768.5 623 65.0
Lj9C473T10 Lonicera japonica HOM05D005390 ORTHO05D007086 1.4e-218 763.5 617 65.3
Nitab4.5_0014349g0010 Nicotiana tabacum HOM05D005390 ORTHO05D007086 2.0e-217 759.6 619 63.5
Phvul.009G170000 Phaseolus vulgaris HOM05D005390 ORTHO05D007086 4.4e-217 758.4 629 64.2
Ca_16101_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 1.7e-216 756.5 625 62.9
Ca_30077_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 1.7e-216 756.5 625 62.9
QL10p005602 Quercus lobata HOM05D005390 ORTHO05D007086 1.7e-216 756.5 624 64.4
Thecc.03G120800 Theobroma cacao HOM05D005390 ORTHO05D007086 1.7e-216 756.5 625 64.6
Psat5g139480 Pisum sativum HOM05D005390 ORTHO05D007086 2.4e-215 752.7 616 64.0
Medtr3g075240 Medicago truncatula HOM05D005390 ORTHO05D007086 5.4e-215 751.5 633 62.4
Actinidia19375 Actinidia chinensis HOM05D005390 ORTHO05D007086 1.2e-214 750.4 618 65.4
Haze_07289 Corylus avellana HOM05D005390 ORTHO05D007086 1.6e-214 750.0 652 61.8
Nitab4.5_0000003g0930 Nicotiana tabacum HOM05D005390 ORTHO05D007086 4.5e-214 748.4 622 62.4
Manes.06G113700 Manihot esculenta HOM05D005390 ORTHO05D007086 1.0e-213 747.3 620 64.8
CANSAT80G2255 Cannabis sativa HOM05D005390 ORTHO05D007086 3.8e-213 745.3 614 64.7
DCAR_016426 Daucus carota HOM05D005390 ORTHO05D007086 8.6e-213 744.2 565 67.8
HanXRQChr09g0272781 Helianthus annuus HOM05D005390 ORTHO05D007086 8.6e-213 744.2 618 63.3
ATR0824G019 Amborella trichopoda HOM05D005390 ORTHO05D007086 2.8e-211 739.2 633 61.3
Eucgr.B00166 Eucalyptus grandis HOM05D005390 ORTHO05D007086 6.1e-211 738.0 627 61.7
PGR083G1300 Punica granatum HOM05D005390 ORTHO05D007086 6.1e-211 738.0 619 62.2
Gohir.A12G187300 Gossypium hirsutum HOM05D005390 ORTHO05D007086 1.4e-210 736.9 625 64.0
Gohir.D12G190300 Gossypium hirsutum HOM05D005390 ORTHO05D007086 1.8e-210 736.5 625 63.8
Duzib205G1771 Durio zibethinus HOM05D005390 ORTHO05D007086 4.0e-210 735.3 627 63.6
Gorai.008G204100 Gossypium raimondii HOM05D005390 ORTHO05D007086 4.0e-210 735.3 625 63.5
Cc04_g10660 Coffea canephora HOM05D005390 ORTHO05D007086 8.9e-210 734.2 567 64.2
Sp2g26330 Schrenkiella parvula HOM05D005390 ORTHO05D007086 2.6e-209 732.6 620 61.3
TPR.G38664 Trifolium pratense HOM05D005390 ORTHO05D007086 7.8e-206 721.1 621 61.4
ClCG03G003390 Citrullus lanatus HOM05D005390 ORTHO05D007086 1.1e-204 717.2 630 59.5
Prupe.5G160000 Prunus persica HOM05D005390 ORTHO05D007086 1.5e-204 716.8 622 62.7
AL8G40290 Arabidopsis lyrata HOM05D005390 ORTHO05D007086 3.3e-204 715.7 620 59.7
Oeu011587.1 Olea europaea HOM05D005390 ORTHO05D007086 4.3e-204 715.3 557 65.2
Glyma.06G174300 Glycine max HOM05D005390 ORTHO05D007086 1.2e-203 713.8 624 61.5
Ciclev10019194m.g Citrus clementina HOM05D005390 ORTHO05D007086 3.1e-202 709.1 640 60.6
Carub.0008s2396 Capsella rubella HOM05D005390 ORTHO05D007086 1.5e-201 706.8 620 59.0
Lj1g0026120 Lotus japonicus HOM05D005390 ORTHO05D007086 1.5e-201 706.8 617 60.6
Aa31LG1G18770 Aethionema arabicum HOM05D005390 ORTHO05D007086 2.0e-201 706.4 621 59.6
ECA232G3921 Erigeron canadensis HOM05D005390 ORTHO05D007086 5.8e-201 704.9 615 60.7
MD06G1160400 Malus domestica HOM05D005390 ORTHO05D007086 1.7e-200 703.4 626 61.8
CsaV3_1G009190 Cucumis sativus L. HOM05D005390 ORTHO05D007086 2.9e-200 702.6 630 57.9
EL10Ac7g18053 Beta vulgaris HOM05D005390 ORTHO05D007086 4.9e-200 701.8 651 58.1
Thhalv10003779m.g Eutrema salsugineum HOM05D005390 ORTHO05D007086 8.3e-200 701.0 621 59.1
Cpa.g.sc4.44 Carica papaya HOM05D005390 ORTHO05D007086 1.4e-199 700.3 632 59.5
Lsat_1_v5_gn_4_78320 Lactuca sativa HOM05D005390 ORTHO05D007086 2.0e-198 696.4 619 60.6
FAN13G2995 Fragaria x ananassa HOM05D005390 ORTHO05D007086 3.3e-196 689.1 610 60.7
THA.LOC104818200 Tarenaya hassleriana HOM05D005390 ORTHO05D007086 5.6e-196 688.3 615 59.7
Lalb_Chr11g0069761 Lupinus albus HOM05D005390 ORTHO05D007086 7.3e-196 688.0 635 59.1
SEGI_06673 Sequoiadendron giganteum HOM05D005390 ORTHO05D007086 1.2e-195 687.2 621 59.6
arahy.Tifrunner.gnm1.ann1.EKVH9G Arachis hypogaea HOM05D005390 ORTHO05D007086 8.0e-195 684.5 580 62.1
FAN18G2367 Fragaria x ananassa HOM05D005390 ORTHO05D007086 2.3e-194 682.9 614 60.1
Sabra12G0066700 Salix brachista HOM05D005390 ORTHO05D007086 5.2e-194 681.8 621 59.6
MSTRG.11518 Avicennia marina HOM05D005390 ORTHO05D007086 1.5e-193 680.2 627 57.1
AUR62025748 Chenopodium quinoa HOM05D005390 ORTHO05D007086 1.3e-192 677.2 576 61.8
Potri.012G092000 Populus trichocarpa HOM05D005390 ORTHO05D007086 2.2e-192 676.4 630 58.4
RcHm_v2.0_Chr7g0191501 Rosa chinensis HOM05D005390 ORTHO05D007086 2.9e-192 676.0 614 60.6
CAN.G1046.1 Capsicum annuum HOM05D005390 ORTHO05D007086 7.0e-191 671.4 546 64.1
AT5G63200 Arabidopsis thaliana HOM05D005390 ORTHO05D007086 7.8e-190 667.9 620 57.4
SGA_v2.0_scaffold25G10792 Striga asiatica HOM05D005390 ORTHO05D007086 2.3e-189 666.4 648 55.1
FAN08G1670 Fragaria x ananassa HOM05D005390 ORTHO05D007086 5.6e-188 661.8 613 59.4
AUR62001260 Chenopodium quinoa HOM05D005390 ORTHO05D007086 7.3e-188 661.4 624 56.9
COL.COLO4_04551 Corchorus olitorius HOM05D005390 ORTHO05D007086 2.8e-187 659.4 613 59.4
BolC9t53836H Brassica oleracea HOM05D005390 ORTHO05D007086 2.4e-183 646.4 626 56.2
Sed0027546 Sechium edule HOM05D005390 ORTHO05D007086 2.4e-183 646.4 523 62.3
C09p09230 Brassica napus HOM05D005390 ORTHO05D007086 2.7e-182 642.9 626 55.9
BraA09t36469Z Brassica rapa HOM05D005390 ORTHO05D007086 2.4e-178 629.8 625 54.9
A09p08180 Brassica napus HOM05D005390 ORTHO05D007086 3.1e-178 629.4 625 54.7
Zm00001eb144210 Zea mays HOM05D005390 ORTHO05D007086 3.4e-177 625.9 610 54.8
Hund05621 Selenicereus undatus HOM05D005390 ORTHO05D007086 1.3e-173 614.0 630 55.1
MELO3C002325.2 Cucumis melo HOM05D005390 ORTHO05D007086 3.0e-173 612.8 656 52.7
unitig_22.g5443 Utricularia gibba HOM05D005390 ORTHO05D007086 4.3e-172 609.0 608 53.3
Atru.BG.198.p Acer truncatum HOM05D005390 ORTHO05D007086 1.6e-171 607.1 507 62.9
Os01g0906600 Oryza sativa ssp. japonica HOM05D005390 ORTHO05D007086 1.8e-162 577.0 620 52.1
Nn1g05493 Nelumbo nucifera HOM05D005390 ORTHO05D007086 6.4e-160 568.5 525 60.4
CSS0013940 Camellia sinensis var. sinensis HOM05D005390 ORTHO05D007086 5.4e-159 565.5 459 65.1
HPP92_001962 Vanilla planifolia HOM05D005390 ORTHO05D007086 2.3e-157 560.1 623 51.2
SMO356G0210 Selaginella moellendorffii HOM05D005390 ORTHO05D007086 1.3e-149 534.3 623 48.3
AagrBONN_evm.TU.Sc2ySwM_228.344 Anthoceros agrestis HOM05D005390 ORTHO05D007086 2.3e-149 533.5 630 48.7
Sc22g0003910 Simmondsia chinensis HOM05D005390 ORTHO05D007086 5.3e-146 522.3 453 63.4
Mapoly0013s0178 Marchantia polymorpha HOM05D005390 ORTHO05D007086 3.4e-145 519.6 626 47.3
FvH4_5g07030 Fragaria vesca HOM05D005390 ORTHO05D007086 1.2e-137 494.6 450 58.9
Migut.O00224 Erythranthe guttata HOM05D005390 ORTHO05D007086 6.1e-134 482.3 614 46.6
Nn7g37481 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.7e-131 474.2 400 64.0
arahy.Tifrunner.gnm1.ann1.V8X883 Arachis hypogaea HOM05D005390 ORTHO05D007086 4.8e-131 472.6 618 46.3
Nn8g39688 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.2e-129 468.0 332 71.7
VMungo1309G2389 Vigna mungo HOM05D005390 ORTHO05D007086 3.8e-128 463.0 359 64.3
FAN04G1107 Fragaria x ananassa HOM05D005390 ORTHO05D007086 7.7e-121 438.7 364 62.6
CiPaw.12G034400 Carya illinoinensis HOM05D005390 ORTHO05D007086 5.3e-114 416.0 356 62.4
Oeu053506.1 Olea europaea HOM05D005390 ORTHO05D007086 1.2e-113 414.8 316 65.2
SalBow5G1843 Salvia bowleyana HOM05D005390 ORTHO05D007086 2.4e-106 390.6 502 46.2
Nn5g27251 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.2e-105 388.3 525 45.5
MBI11_g46067_MAGBIO Magnolia biondii HOM05D005390 ORTHO05D007086 2.5e-95 354.0 294 65.0
Nn8g40909 Nelumbo nucifera HOM05D005390 ORTHO05D007086 2.4e-82 310.8 215 73.0
MBI11_g46351_MAGBIO Magnolia biondii HOM05D005390 ORTHO05D007086 3.0e-80 303.9 257 64.2
VMungo1309G0829 Vigna mungo HOM05D005390 ORTHO05D007086 6.6e-80 302.8 254 65.7
Nn5g28724 Nelumbo nucifera HOM05D005390 ORTHO05D007086 5.1e-72 276.6 206 68.4
Nn1g08373 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.1e-71 275.4 191 71.2
Nn2g15275 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.2e-66 257.3 200 66.0
CsaV3_3G015420 Cucumis sativus L. HOM05D005390 ORTHO05D007086 3.9e-64 250.4 352 44.0
CiPaw.12G034500 Carya illinoinensis HOM05D005390 ORTHO05D007086 8.1e-62 242.7 206 61.2
Hma1.2p1_2683F.1_g326880 Hydrangea macrophylla HOM05D005390 ORTHO05D007086 1.5e-60 238.4 172 69.2
CDE06G0744 Ceratophyllum demersum HOM05D005390 ORTHO05D007086 1.1e-55 222.2 175 65.1
CSS0032502 Camellia sinensis var. sinensis HOM05D005390 ORTHO05D007086 5.8e-52 209.9 174 64.4
CSS0049807 Camellia sinensis var. sinensis HOM05D005390 ORTHO05D007086 1.3e-51 208.8 174 63.8
CARHR277060 Cardamine hirsuta HOM05D005390 ORTHO05D007086 4.3e-47 193.7 169 57.4
Nn8g40618 Nelumbo nucifera HOM05D005390 ORTHO05D007086 5.5e-42 176.8 123 72.4
Hma1.2p1_2683F.1_g326890 Hydrangea macrophylla HOM05D005390 ORTHO05D007086 5.1e-40 170.2 153 60.1
CDE06G2390 Ceratophyllum demersum HOM05D005390 ORTHO05D007086 5.8e-36 156.8 109 70.6
CsaV3_3G015410 Cucumis sativus L. HOM05D005390 ORTHO05D007086 2.2e-35 154.8 259 43.2
Nn1g03252 Nelumbo nucifera HOM05D005390 ORTHO05D007086 6.0e-33 146.7 93 78.5
Nn1g06247 Nelumbo nucifera HOM05D005390 ORTHO05D007086 4.3e-31 140.6 97 71.1
Nn6g32370 Nelumbo nucifera HOM05D005390 ORTHO05D007086 2.0e-28 131.7 102 63.7
RcHm_v2.0_Chr5g0027631 Rosa chinensis HOM05D005390 ORTHO05D007086 1.3e-27 129.0 169 51.5
Nn5g26726 Nelumbo nucifera HOM05D005390 ORTHO05D007086 2.2e-27 128.3 80 77.5
CARHR043650 Cardamine hirsuta HOM05D005390 ORTHO05D007086 5.0e-27 127.1 148 48.0
Psat7g117320 Pisum sativum HOM05D005390 ORTHO05D004709 5.1e-24 117.1 122 54.1
Nn1g06248 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.5e-23 115.5 78 73.1
Nn2g14552 Nelumbo nucifera HOM05D005390 ORTHO05D028071 2.2e-19 101.7 58 77.6
RcHm_v2.0_Chr5g0027621 Rosa chinensis HOM05D005390 ORTHO05D007086 7.9e-17 93.2 78 59.0
CAN.G1302.1 Capsicum annuum HOM05D005390 ORTHO05D002902 1.0e-16 92.8 308 27.9
CAN.G534.23 Capsicum annuum HOM05D005390 ORTHO05D007086 6.9e-13 80.1 70 52.9
CAN.G755.13 Capsicum annuum HOM05D005390 ORTHO05D007086 2.9e-11 74.7 101 47.5
TAR381G0053 Trochodendron aralioides HOM05D000018 ORTHO05D001172 2.9e-11 74.7 87 50.6
A06p18430 Brassica napus HOM05D005390 ORTHO05D028071 2.3e-08 65.1 46 54.3
A09p53940 Brassica napus HOM05D005390 ORTHO05D028071 8.8e-08 63.2 46 52.2
BraA09t40810Z Brassica rapa HOM05D005390 ORTHO05D028071 8.8e-08 63.2 46 52.2


User provided reference genes

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