Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4653 Papaver somniferum HOM05D002828 ORTHO05D305642 1.3e-79 299.7 157 100.0
PSO170G5494 Papaver somniferum HOM05D002828 ORTHO05D003457 1.5e-30 136.7 101 75.2
PSO700G0086 Papaver somniferum HOM05D002828 ORTHO05D003457 1.3e-26 123.6 101 69.3
MBI09_g26549_MAGBIO Magnolia biondii HOM05D002828 ORTHO05D003457 4.7e-16 88.6 105 53.3
ATR0579G146 Amborella trichopoda HOM05D002828 ORTHO05D003457 1.1e-12 77.4 109 47.7
PSO675G6526 Papaver somniferum HOM05D002828 ORTHO05D003457 1.1e-12 77.4 104 51.0
MBI05_g33513_MAGBIO Magnolia biondii HOM05D002828 ORTHO05D003457 1.4e-12 77.0 120 45.0
PSO541G0073 Papaver somniferum HOM05D002828 ORTHO05D003457 3.1e-12 75.9 104 50.0
Medtr5g022440 Medicago truncatula HOM05D002828 ORTHO05D003457 5.4e-12 75.1 109 48.6
ClCG01G020390 Citrullus lanatus HOM05D002828 ORTHO05D003457 1.2e-11 73.9 111 45.9
CsaV3_6G047270 Cucumis sativus L. HOM05D002828 ORTHO05D003457 1.2e-11 73.9 114 45.6
Aqoxy6G02253 Aquilegia oxysepala HOM05D002828 ORTHO05D003457 5.9e-11 71.6 73 56.2
MELO3C007918.2 Cucumis melo HOM05D002828 ORTHO05D003457 7.8e-11 71.2 114 44.7
MBI07_g38937_MAGBIO Magnolia biondii HOM05D002828 ORTHO05D003457 1.3e-10 70.5 98 48.0
Lalb_Chr09g0321661 Lupinus albus HOM05D002828 ORTHO05D003457 1.7e-10 70.1 114 47.4
RcHm_v2.0_Chr2g0099211 Rosa chinensis HOM05D002828 ORTHO05D003457 1.7e-10 70.1 109 45.9
SalBow3G4338 Salvia bowleyana HOM05D002828 ORTHO05D003457 1.7e-10 70.1 108 46.3
vmacro18406 Vaccinium macrocarpon HOM05D002828 ORTHO05D003457 2.3e-10 69.7 112 43.8
HanXRQChr12g0368741 Helianthus annuus HOM05D002828 ORTHO05D003457 2.9e-10 69.3 111 46.8
Hma1.2p1_0315F.1_g122260 Hydrangea macrophylla HOM05D002828 ORTHO05D003457 8.6e-10 67.8 114 44.7
MD05G1119600 Malus domestica HOM05D002828 ORTHO05D003457 1.1e-09 67.4 107 45.8
CSS0036680 Camellia sinensis var. sinensis HOM05D002828 ORTHO05D003457 1.5e-09 67.0 84 48.8
Cc07_g10940 Coffea canephora HOM05D002828 ORTHO05D003457 1.5e-09 67.0 112 43.8
MBI19_g01950_MAGBIO Magnolia biondii HOM05D002828 ORTHO05D003457 5.6e-09 65.1 102 42.2
Potri.009G133000 Populus trichocarpa HOM05D002828 ORTHO05D003457 5.6e-09 65.1 107 43.0
Actinidia35663 Actinidia chinensis HOM05D002828 ORTHO05D003457 9.5e-09 64.3 114 43.0
MD15G1243700 Malus domestica HOM05D002828 ORTHO05D003457 9.5e-09 64.3 109 45.9
Nn5g30738 Nelumbo nucifera HOM05D002828 ORTHO05D003457 9.5e-09 64.3 107 46.7
CsaV3_3G000720 Cucumis sativus L. HOM05D002828 ORTHO05D003457 1.2e-08 63.9 113 45.1
Sed0019164 Sechium edule HOM05D002828 ORTHO05D003457 1.2e-08 63.9 114 43.9
MBI05_g23513_MAGBIO Magnolia biondii HOM05D002828 ORTHO05D003457 1.6e-08 63.5 106 42.5
Peaxi162Scf00635g00717 Petunia axillaris HOM05D002828 ORTHO05D003457 1.6e-08 63.5 76 50.0
Lj4C221T7 Lonicera japonica HOM05D002828 ORTHO05D003457 2.1e-08 63.2 111 40.5
Psat4g100920 Pisum sativum HOM05D002828 ORTHO05D003457 2.1e-08 63.2 108 42.6
Rhsim08G0032500 Rhododendron simsii HOM05D002828 ORTHO05D003457 2.1e-08 63.2 84 46.4
Psat2g153600 Pisum sativum HOM05D002828 ORTHO05D003457 2.8e-08 62.8 118 41.5
TAR376G0528 Trochodendron aralioides HOM05D002828 ORTHO05D003457 2.8e-08 62.8 108 45.4
DCAR_016595 Daucus carota HOM05D002828 ORTHO05D003457 3.6e-08 62.4 107 43.9
Ciclev10028565m.g Citrus clementina HOM05D002828 ORTHO05D003457 4.7e-08 62.0 109 46.8
Potri.004G173700 Populus trichocarpa HOM05D002828 ORTHO05D003457 4.7e-08 62.0 107 42.1
HanXRQChr08g0218841 Helianthus annuus HOM05D002828 ORTHO05D003457 6.1e-08 61.6 112 44.6
MELO3C013760.2 Cucumis melo HOM05D002828 ORTHO05D003457 8.0e-08 61.2 110 44.5
Sabra04G0115600 Salix brachista HOM05D005160 ORTHO05D006127 8.0e-08 61.2 106 42.5
FvH4_1g11620 Fragaria vesca HOM05D002828 ORTHO05D003457 1.0e-07 60.8 110 41.8
GSVIVG01018756001 Vitis vinifera HOM05D002828 ORTHO05D003457 1.0e-07 60.8 72 48.6
CiPaw.08G129400 Carya illinoinensis HOM05D002828 ORTHO05D003457 1.4e-07 60.5 113 40.7
TPR.G19495 Trifolium pratense HOM05D002828 ORTHO05D003457 1.4e-07 60.5 106 44.3
ClCG10G000640 Citrullus lanatus HOM05D002828 ORTHO05D003457 1.8e-07 60.1 113 43.4
Nn6g32023 Nelumbo nucifera HOM05D002828 ORTHO05D003457 1.8e-07 60.1 107 43.0
Prupe.8G163800 Prunus persica HOM05D002828 ORTHO05D003457 1.8e-07 60.1 110 44.5
BcaB03g12214 Brassica carinata HOM05D002828 ORTHO05D003457 2.3e-07 59.7 101 40.6
BcaB03g12215 Brassica carinata HOM05D002828 ORTHO05D003457 2.3e-07 59.7 101 40.6
BcaC01g00244 Brassica carinata HOM05D002828 ORTHO05D003457 2.3e-07 59.7 101 40.6
A08p24120 Brassica napus HOM05D002828 ORTHO05D003457 2.3e-07 59.7 101 40.6
C03p77190 Brassica napus HOM05D002828 ORTHO05D003457 2.3e-07 59.7 101 40.6
BraA08t34367Z Brassica rapa HOM05D002828 ORTHO05D003457 2.3e-07 59.7 101 40.6
Thhalv10025445m.g Eutrema salsugineum HOM05D002828 ORTHO05D003457 2.3e-07 59.7 101 40.6
Sabra09G0103200 Salix brachista HOM05D005160 ORTHO05D006127 2.3e-07 59.7 107 39.3
VMungo1215G0551 Vigna mungo HOM05D002828 ORTHO05D003457 2.3e-07 59.7 114 43.9
CANSAT25G3087 Cannabis sativa HOM05D002828 ORTHO05D003457 3.0e-07 59.3 84 47.6
Ca_24914_v3 Cicer arietinum L. HOM05D002828 ORTHO05D003457 3.0e-07 59.3 118 39.8
Dinv40107 Davidia involucrata HOM05D002828 ORTHO05D003457 3.0e-07 59.3 114 39.5
Lalb_Chr16g0377461 Lupinus albus HOM05D002828 ORTHO05D003457 3.0e-07 59.3 114 42.1
Manes.02G137100 Manihot esculenta HOM05D002828 ORTHO05D003457 3.0e-07 59.3 114 39.5
Nitab4.5_0004340g0020 Nicotiana tabacum HOM05D002828 ORTHO05D003457 3.0e-07 59.3 77 48.1
QL06p050893 Quercus lobata HOM05D002828 ORTHO05D003457 4.0e-07 58.9 80 46.2
AL7G10520 Arabidopsis lyrata HOM05D002828 ORTHO05D003457 5.2e-07 58.5 100 40.0
THA.LOC104821334 Tarenaya hassleriana HOM05D002828 ORTHO05D003457 5.2e-07 58.5 107 42.1
CDE05G0567 Ceratophyllum demersum HOM05D002828 ORTHO05D003457 6.8e-07 58.2 110 43.6
Glyma.01G165100 Glycine max HOM05D002828 ORTHO05D003457 6.8e-07 58.2 114 43.0
Manes.02G137500 Manihot esculenta HOM05D002828 ORTHO05D003457 6.8e-07 58.2 114 39.5
Phvul.003G264300 Phaseolus vulgaris HOM05D002828 ORTHO05D003457 6.8e-07 58.2 114 41.2
HPP92_002425 Vanilla planifolia HOM05D002828 ORTHO05D003457 6.8e-07 58.2 107 35.5
Cpa.g.sc6.273 Carica papaya HOM05D002828 ORTHO05D003457 8.9e-07 57.8 112 41.1
SGA_v2.0_scaffold37G14609 Striga asiatica HOM05D002828 ORTHO05D003457 1.2e-06 57.4 112 40.2
THA.LOC104807816 Tarenaya hassleriana HOM05D002828 ORTHO05D003457 1.2e-06 57.4 107 39.3
Ca_22389_v3 Cicer arietinum L. HOM05D002828 ORTHO05D003457 1.5e-06 57.0 107 43.0
Nitab4.5_0000438g0180 Nicotiana tabacum HOM05D002828 ORTHO05D003457 1.5e-06 57.0 77 46.8
CDE05G0346 Ceratophyllum demersum HOM05D002828 ORTHO05D003457 2.0e-06 56.6 83 48.2
Solyc02g083710.3 Solanum lycopersicum HOM05D002828 ORTHO05D003457 2.0e-06 56.6 77 45.5
Sopen02g028480 Solanum pennellii HOM05D002828 ORTHO05D003457 2.0e-06 56.6 77 45.5
PGSC0003DMG400003575 Solanum tuberosum HOM05D002828 ORTHO05D003457 2.0e-06 56.6 77 45.5
VMungo0251G2732 Vigna mungo HOM05D002828 ORTHO05D003457 2.0e-06 56.6 114 41.2
Actinidia17431 Actinidia chinensis HOM05D002828 ORTHO05D003457 2.6e-06 56.2 108 41.7
arahy.Tifrunner.gnm1.ann1.88HTN6 Arachis hypogaea HOM05D002828 ORTHO05D003457 2.6e-06 56.2 114 40.4
arahy.Tifrunner.gnm1.ann1.H9LPGA Arachis hypogaea HOM05D002828 ORTHO05D003457 2.6e-06 56.2 114 40.4
Lalb_Chr05g0212331 Lupinus albus HOM05D002828 ORTHO05D003457 3.4e-06 55.8 85 45.9
Prupe.7G170300 Prunus persica HOM05D002828 ORTHO05D003457 3.4e-06 55.8 85 45.9
CAN.G1274.20 Capsicum annuum HOM05D002828 ORTHO05D003457 4.4e-06 55.5 77 45.5
FAN24G1153 Fragaria x ananassa HOM05D002828 ORTHO05D003457 4.4e-06 55.5 117 39.3
TPR.G10541 Trifolium pratense HOM05D002828 ORTHO05D003457 4.4e-06 55.5 117 39.3
Haze_03742 Corylus avellana HOM05D002828 ORTHO05D003457 5.8e-06 55.1 80 46.2
Sp7g37150 Schrenkiella parvula HOM05D002828 ORTHO05D003457 5.8e-06 55.1 98 38.8
TAR381G0674 Trochodendron aralioides HOM05D002828 ORTHO05D003457 5.8e-06 55.1 78 51.3
Atru.chr5.3294 Acer truncatum HOM05D002828 ORTHO05D003457 7.5e-06 54.7 109 44.0
RcHm_v2.0_Chr6g0244071 Rosa chinensis HOM05D002828 ORTHO05D003457 7.5e-06 54.7 103 38.8
AT4G38630 Arabidopsis thaliana HOM05D002828 ORTHO05D003457 9.8e-06 54.3 97 39.2
A06p48930 Brassica napus HOM05D002828 ORTHO05D003457 9.8e-06 54.3 101 38.6
BraA06t27761Z Brassica rapa HOM05D002828 ORTHO05D003457 9.8e-06 54.3 101 38.6
ECA233G1838 Erigeron canadensis HOM05D002828 ORTHO05D003457 9.8e-06 54.3 73 45.2


User provided reference genes

Program Settings