Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 1.0e-123 446.8 232 100.0
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 2.0e-116 422.5 232 96.1
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 4.9e-54 215.3 223 57.4
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 1.1e-53 214.2 215 57.2
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 1.9e-53 213.4 220 57.7
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 5.4e-53 211.8 219 57.5
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 2.1e-52 209.9 216 55.6
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 5.1e-51 205.3 216 55.6
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 6.6e-51 204.9 227 56.8
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 1.5e-50 203.8 219 57.1
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 7.3e-50 201.4 224 55.8
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 1.3e-49 200.7 211 56.4
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 2.1e-49 199.9 215 56.3
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 3.6e-49 199.1 230 55.2
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 3.6e-49 199.1 227 54.6
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 3.6e-49 199.1 217 54.8
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 4.8e-49 198.7 220 53.6
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 8.1e-49 198.0 220 49.5
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 1.1e-48 197.6 219 54.3
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 3.1e-48 196.1 216 56.0
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 3.1e-48 196.1 216 56.0
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 3.1e-48 196.1 220 48.6
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 9.0e-48 194.5 216 54.2
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 2.6e-47 193.0 216 55.6
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 2.6e-47 193.0 218 52.3
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 3.4e-47 192.6 218 54.1
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 3.4e-47 192.6 226 55.3
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 7.6e-47 191.4 223 51.1
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 9.9e-47 191.0 218 51.4
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 1.3e-46 190.7 225 50.7
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 2.2e-46 189.9 217 50.7
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 2.9e-46 189.5 223 52.0
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 2.9e-46 189.5 217 52.5
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 6.4e-46 188.3 218 54.6
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 2.4e-45 186.4 223 50.2
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 3.2e-45 186.0 215 50.7
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 5.4e-45 185.3 220 52.7
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 7.1e-45 184.9 219 51.6
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 1.6e-44 183.7 238 48.3
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.1e-44 183.3 220 51.8
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 2.7e-44 183.0 219 52.5
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.7e-44 183.0 217 52.5
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 6.0e-44 181.8 220 51.8
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 7.9e-44 181.4 218 49.1
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 1.0e-43 181.0 218 48.6
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 1.3e-43 180.6 214 50.9
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 3.0e-43 179.5 218 48.6
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 5.1e-43 178.7 221 50.2
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 5.1e-43 178.7 220 51.4
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 6.7e-43 178.3 226 50.4
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 6.7e-43 178.3 217 52.1
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 1.5e-42 177.2 166 59.6
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 1.9e-42 176.8 217 49.8
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 2.5e-42 176.4 219 48.4
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 2.5e-42 176.4 267 44.2
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 2.5e-42 176.4 162 56.8
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 4.3e-42 175.6 220 51.4
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 5.6e-42 175.3 221 49.8
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 9.6e-42 174.5 222 50.5
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 1.3e-41 174.1 224 48.2
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 1.6e-41 173.7 218 47.7
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 1.6e-41 173.7 221 50.2
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 1.6e-41 173.7 226 49.1
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 3.7e-41 172.6 219 49.3
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 3.7e-41 172.6 225 48.0
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 4.8e-41 172.2 215 49.8
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 6.2e-41 171.8 225 48.0
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 1.4e-40 170.6 221 49.3
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 4.0e-40 169.1 223 48.9
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 6.9e-40 168.3 229 45.9
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 6.9e-40 168.3 221 46.6
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 6.9e-40 168.3 225 47.1
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 9.0e-40 167.9 218 45.9
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 9.0e-40 167.9 223 47.5
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 1.5e-39 167.2 231 47.6
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 3.4e-39 166.0 184 53.3
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 7.6e-39 164.9 219 45.7
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 7.6e-39 164.9 238 45.4
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 9.9e-39 164.5 220 45.9
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 3.8e-38 162.5 226 46.5
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 6.4e-38 161.8 230 46.5
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 8.4e-38 161.4 223 46.6
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 8.4e-38 161.4 225 45.3
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 2.4e-37 159.8 217 47.0
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 3.2e-37 159.5 236 44.1
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 7.1e-37 158.3 224 45.1
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 3.5e-36 156.0 219 45.2
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 3.0e-35 152.9 217 46.1
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 2.5e-34 149.8 163 52.8
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 6.9e-32 141.7 219 44.3
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 2.6e-31 139.8 217 45.6
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 1.0e-30 137.9 133 55.6
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 1.7e-30 137.1 125 60.8
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 4.9e-30 135.6 136 56.6
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 1.1e-29 134.4 218 41.7
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 1.9e-29 133.7 227 38.8
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 2.5e-29 133.3 214 40.7
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 7.1e-29 131.7 229 42.4
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 7.1e-29 131.7 228 38.6
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 9.3e-29 131.3 228 38.6
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.3e-27 127.5 232 38.4
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 5.1e-27 125.6 214 38.8
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 6.9e-24 115.2 126 49.2
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 5.9e-23 112.1 119 52.9
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 5.9e-23 112.1 123 52.0
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 1.3e-22 110.9 317 32.5
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 2.2e-22 110.2 171 44.4
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.8e-19 100.5 234 32.9
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.5e-18 97.4 246 32.1
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 7.4e-18 95.1 226 35.4
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 1.4e-13 80.9 51 72.5
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 4.7e-12 75.9 118 41.5
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 4.8e-09 65.9 113 42.5
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 4.1e-08 62.8 96 44.8
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 4.5e-07 59.3 96 44.8
Thhalv10015519m.g Eutrema salsugineum HOM05D000984 ORTHO05D001096 7.7e-07 58.5 82 37.8
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 1.7e-06 57.4 50 56.0
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 3.8e-06 56.2 95 34.7
Cre16.g675861 Chlamydomonas reinhardtii HOM05D000984 ORTHO05D001096 3.8e-06 56.2 90 34.4
SHI16262 Sapria himalayana HOM05D006456 ORTHO05D007588 6.5e-06 55.5 183 32.2


User provided reference genes

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