Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 9.9e-189 663.3 338 100.0
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 7.6e-173 610.5 341 93.0
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 5.7e-51 205.7 351 44.7
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.4e-49 201.1 348 46.3
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 2.4e-49 200.3 351 42.2
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 2.0e-48 197.2 352 44.3
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 2.6e-48 196.8 344 44.2
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 3.6e-45 186.4 341 42.5
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 4.6e-45 186.0 349 42.4
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 7.9e-45 185.3 349 42.1
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 7.9e-45 185.3 349 42.1
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 2.3e-44 183.7 356 42.4
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.9e-44 183.0 351 43.6
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 2.0e-43 180.6 246 51.2
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 2.8e-42 176.8 356 42.1
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 3.7e-42 176.4 349 41.8
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 6.3e-42 175.6 355 40.6
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 1.1e-41 174.9 346 38.7
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.1e-41 174.9 351 42.5
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.4e-41 174.5 353 40.5
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 5.3e-41 172.6 334 41.3
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 1.5e-40 171.0 353 40.8
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 3.4e-40 169.9 358 39.4
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 1.0e-39 168.3 355 41.7
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 2.2e-39 167.2 355 40.6
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 6.5e-39 165.6 348 39.4
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 1.1e-38 164.9 351 38.5
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 1.4e-38 164.5 353 39.4
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 2.5e-38 163.7 352 40.1
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 1.6e-37 161.0 353 39.4
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 2.1e-37 160.6 349 39.0
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 6.1e-37 159.1 360 38.9
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.4e-36 157.9 335 40.0
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 2.3e-36 157.1 342 39.2
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 3.0e-36 156.8 274 45.3
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 8.8e-36 155.2 352 38.4
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 8.8e-36 155.2 362 37.3
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 5.7e-35 152.5 353 38.2
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 1.3e-34 151.4 328 41.2
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 1.7e-34 151.0 330 38.2
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 1.7e-34 151.0 330 38.2
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 6.3e-34 149.1 344 36.9
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 8.2e-34 148.7 345 39.4
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 4.1e-33 146.4 345 37.1
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 5.3e-33 146.0 348 34.5
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 7.0e-33 145.6 347 37.5
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 7.0e-33 145.6 347 37.5
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 7.0e-33 145.6 339 38.3
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 1.2e-32 144.8 345 37.7
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 1.2e-32 144.8 355 38.9
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 1.2e-32 144.8 351 37.6
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 1.2e-32 144.8 346 38.4
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 2.6e-32 143.7 347 36.9
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 3.5e-32 143.3 345 35.7
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 4.5e-32 142.9 342 37.4
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 1.0e-31 141.7 374 33.4
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 1.0e-31 141.7 361 34.1
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 1.0e-31 141.7 348 37.9
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 1.0e-31 141.7 359 38.2
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 1.7e-31 141.0 339 36.0
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 2.2e-31 140.6 348 35.9
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 1.1e-30 138.3 345 36.2
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 2.5e-30 137.1 336 35.4
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 4.2e-30 136.3 321 38.3
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 4.2e-30 136.3 330 36.7
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 4.2e-30 136.3 326 37.7
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 5.5e-30 136.0 326 37.4
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 2.7e-29 133.7 341 36.7
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.7e-29 133.7 326 36.5
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 3.6e-29 133.3 343 37.9
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 8.0e-29 132.1 353 36.0
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 8.0e-29 132.1 349 37.2
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 1.0e-28 131.7 226 45.1
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 3.0e-28 130.2 332 38.3
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 4.0e-28 129.8 342 37.4
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 1.2e-27 128.3 346 35.0
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 3.3e-27 126.7 339 36.9
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 5.7e-27 125.9 324 36.4
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 5.7e-27 125.9 324 36.4
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 7.5e-27 125.6 333 34.8
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 1.3e-26 124.8 339 34.2
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 1.7e-26 124.4 359 35.4
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 8.2e-26 122.1 331 35.0
Actinidia16147 Actinidia chinensis HOM05D004533 ORTHO05D005347 3.1e-25 120.2 238 42.4
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 4.1e-25 119.8 330 35.8
ECA234G4159 Erigeron canadensis HOM05D004533 ORTHO05D005347 9.1e-25 118.6 346 34.1
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 2.7e-24 117.1 351 33.3
MBI16_g39936_MAGBIO Magnolia biondii HOM05D004533 ORTHO05D005347 3.5e-24 116.7 329 35.6
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 4.5e-24 116.3 387 30.7
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 4.5e-24 116.3 386 31.6
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.5e-24 116.3 352 33.2
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.5e-24 116.3 352 33.2
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.5e-24 116.3 352 33.2
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 1.3e-23 114.8 338 35.2
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 1.7e-23 114.4 359 31.2
Lsat_1_v5_gn_4_11700 Lactuca sativa HOM05D004533 ORTHO05D005347 2.2e-23 114.0 347 33.1
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 3.8e-23 113.2 370 31.6
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 3.8e-23 113.2 369 32.0
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 1.1e-22 111.7 373 33.0
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 1.5e-22 111.3 373 32.4
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 1.5e-22 111.3 326 35.0
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 5.5e-22 109.4 354 32.5
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 9.4e-22 108.6 368 31.0
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 9.4e-22 108.6 354 31.6
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 9.4e-22 108.6 367 32.2
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 1.6e-21 107.8 370 31.1
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 1.6e-21 107.8 370 31.1
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 2.7e-21 107.1 354 31.6
Thhalv10018878m.g Eutrema salsugineum HOM05D004533 ORTHO05D005347 3.6e-21 106.7 372 30.6
AL2G28250 Arabidopsis lyrata HOM05D004533 ORTHO05D005347 6.1e-21 105.9 365 31.0
Lj6P776T6 Lonicera japonica HOM05D004533 ORTHO05D005347 8.0e-21 105.5 199 44.2
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 8.0e-21 105.5 315 35.2
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 1.0e-20 105.1 248 35.9
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 2.3e-20 104.0 325 33.8
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 3.0e-20 103.6 326 33.7
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 3.0e-20 103.6 346 36.1
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 4.0e-20 103.2 355 29.6
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 6.8e-20 102.4 355 31.3
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 1.2e-19 101.7 340 30.9
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 1.5e-19 101.3 319 34.8
BcaC03g15057 Brassica carinata HOM05D004533 ORTHO05D005347 3.4e-19 100.1 355 31.8
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 5.7e-19 99.4 332 32.8
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 7.5e-19 99.0 207 40.6
Nn3g17512 Nelumbo nucifera HOM05D004533 ORTHO05D005347 1.7e-18 97.8 321 31.2
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 2.2e-18 97.4 351 34.5
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 2.8e-18 97.1 333 32.4
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 2.8e-18 97.1 338 30.8
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 3.7e-18 96.7 331 35.0
DCAR_007202 Daucus carota HOM05D004533 ORTHO05D005347 4.8e-18 96.3 323 34.1
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 2.4e-17 94.0 340 31.8
PSO063G5982 Papaver somniferum HOM05D004533 ORTHO05D005347 3.1e-17 93.6 335 33.1
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 1.6e-16 91.3 328 32.3
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 2.7e-16 90.5 335 33.1
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 2.7e-16 90.5 337 32.6
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 7.7e-16 89.0 321 31.8
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 8.6e-15 85.5 326 31.9
PGR102G1315 Punica granatum HOM05D004533 ORTHO05D005347 1.5e-14 84.7 340 30.0
Sopen05g006810 Solanum pennellii HOM05D004533 ORTHO05D005347 1.5e-14 84.7 266 30.8
Ah.02g126770 Amaranthus hybridus HOM05D004533 ORTHO05D005347 1.9e-14 84.3 333 31.5
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 4.2e-14 83.2 353 28.6
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 4.2e-14 83.2 342 29.2
PGR119G0103 Punica granatum HOM05D004533 ORTHO05D005347 8.0e-13 79.0 354 29.9
BcaC08g45911 Brassica carinata HOM05D004533 ORTHO05D005347 1.5e-11 74.7 284 28.5
BcaC08g45912 Brassica carinata HOM05D004533 ORTHO05D005347 2.6e-11 73.9 286 28.3
CDE02G4104 Ceratophyllum demersum HOM05D004533 ORTHO05D005347 2.2e-10 70.9 313 29.1
SGA_v2.0_scaffold71G23864 Striga asiatica HOM05D001488 ORTHO05D001456 1.4e-09 68.2 226 32.3
Lj7C233T2 Lonicera japonica HOM05D001488 ORTHO05D001456 1.6e-08 64.7 218 32.1
Carub.0003s1356 Capsella rubella HOM05D001488 ORTHO05D001456 4.5e-08 63.2 225 31.6
TAR626G0456 Trochodendron aralioides HOM05D001488 ORTHO05D001456 7.8e-08 62.4 223 34.1
Actinidia27576 Actinidia chinensis HOM05D001488 ORTHO05D001456 1.3e-07 61.6 221 33.9
Actinidia25699 Actinidia chinensis HOM05D001488 ORTHO05D001456 1.7e-07 61.2 220 32.7
Lsat_1_v5_gn_1_37441 Lactuca sativa HOM05D001488 ORTHO05D001456 2.3e-07 60.8 232 32.3
Dinv25581 Davidia involucrata HOM05D001488 ORTHO05D001456 2.9e-07 60.5 236 31.8
Rhsim05G0012700 Rhododendron simsii HOM05D001488 ORTHO05D001456 2.9e-07 60.5 304 27.0
Sabra18G0057600 Salix brachista HOM05D001488 ORTHO05D001456 2.9e-07 60.5 212 30.2
CiPaw.01G220600 Carya illinoinensis HOM05D001488 ORTHO05D001456 6.6e-07 59.3 265 29.1
Thhalv10022002m.g Eutrema salsugineum HOM05D001488 ORTHO05D001456 6.6e-07 59.3 230 30.4
CANSAT64G2295 Cannabis sativa HOM05D004533 ORTHO05D005347 8.6e-07 58.9 388 25.0
Actinidia32178 Actinidia chinensis HOM05D001488 ORTHO05D001456 1.1e-06 58.5 242 30.2
Rhsim08G0237500 Rhododendron simsii HOM05D001488 ORTHO05D001456 1.9e-06 57.8 275 30.9
FAN20G1484 Fragaria x ananassa HOM05D001488 ORTHO05D001456 2.5e-06 57.4 254 29.5
FAN15G1669 Fragaria x ananassa HOM05D001488 ORTHO05D001456 3.3e-06 57.0 247 30.4
PSO210G0965 Papaver somniferum HOM05D001488 ORTHO05D001456 3.3e-06 57.0 248 30.2
BcaC08g45913 Brassica carinata HOM05D004533 ORTHO05D005347 4.3e-06 56.6 165 30.9
BcaC05g29134 Brassica carinata HOM05D001488 ORTHO05D001456 5.6e-06 56.2 226 30.5
A05p35430 Brassica napus HOM05D001488 ORTHO05D001456 5.6e-06 56.2 258 28.7
C05p53720 Brassica napus HOM05D001488 ORTHO05D001456 5.6e-06 56.2 226 30.5
BolC5t34042H Brassica oleracea HOM05D001488 ORTHO05D001456 5.6e-06 56.2 226 30.5
BraA05t22353Z Brassica rapa HOM05D001488 ORTHO05D001456 5.6e-06 56.2 258 28.7
FAN27G1098 Fragaria x ananassa HOM05D001488 ORTHO05D001456 5.6e-06 56.2 254 29.5
Oeu058721.1 Olea europaea HOM05D001488 ORTHO05D001456 5.6e-06 56.2 227 30.4
Oeu007567.1 Olea europaea HOM05D001488 ORTHO05D001456 7.3e-06 55.8 227 29.5
PGSC0003DMG400002570 Solanum tuberosum HOM05D001488 ORTHO05D001456 7.3e-06 55.8 294 31.6
BraA01t04005Z Brassica rapa HOM05D001488 ORTHO05D001456 9.5e-06 55.5 256 29.3
Dinv42369 Davidia involucrata HOM05D001488 ORTHO05D001456 9.5e-06 55.5 217 30.9
FvH4_2g31260 Fragaria vesca HOM05D001488 ORTHO05D001456 9.5e-06 55.5 247 30.4
TPR.G16451 Trifolium pratense HOM05D001488 ORTHO05D001456 9.5e-06 55.5 220 30.9


User provided reference genes

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