Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4451 Papaver somniferum HOM05D006510 ORTHO05D008171 0.0e+00 1627.1 861 100.0
PSO782G3259 Papaver somniferum HOM05D006510 ORTHO05D008171 0.0e+00 1577.0 861 94.7
TAR636G1540 Trochodendron aralioides HOM05D006510 ORTHO05D008171 0.0e+00 1142.1 870 68.6
COL.COLO4_33599 Corchorus olitorius HOM05D006510 ORTHO05D008171 1.2e-307 1059.7 872 66.4
Thecc.01G152700 Theobroma cacao HOM05D006510 ORTHO05D008171 7.9e-307 1057.0 870 64.9
QL08p042146 Quercus lobata HOM05D006510 ORTHO05D008171 2.3e-306 1055.4 871 64.3
Cfa021921 Carpinus fangiana HOM05D006510 ORTHO05D008171 8.7e-306 1053.5 872 63.9
Nn8g40464 Nelumbo nucifera HOM05D006510 ORTHO05D008171 1.1e-305 1053.1 870 64.7
Aqoxy5G02856 Aquilegia oxysepala HOM05D006510 ORTHO05D008171 2.5e-305 1052.0 871 63.5
CSS0034147 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 1.2e-299 1033.1 872 63.4
CSS0039339 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 1.6e-299 1032.7 872 63.3
Duzib147G0397 Durio zibethinus HOM05D006510 ORTHO05D008171 7.9e-299 1030.4 870 63.9
CiPaw.03G194300 Carya illinoinensis HOM05D006510 ORTHO05D008171 4.3e-297 1024.6 870 62.6
MBI16_g39629_MAGBIO Magnolia biondii HOM05D006510 ORTHO05D008171 1.2e-294 1016.5 868 63.1
Hma1.2p1_0178F.1_g078710 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 1.0e-293 1013.4 872 61.8
Prupe.3G115700 Prunus persica HOM05D006510 ORTHO05D008171 1.7e-293 1012.7 873 64.9
Gorai.006G003700 Gossypium raimondii HOM05D006510 ORTHO05D008171 3.0e-290 1001.9 875 62.1
Haze_13408 Corylus avellana HOM05D006510 ORTHO05D008171 3.9e-290 1001.5 831 63.9
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 5.1e-290 1001.1 872 62.0
Lj3g0027149 Lotus japonicus HOM05D006510 ORTHO05D008171 6.7e-290 1000.7 873 61.6
arahy.Tifrunner.gnm1.ann1.JGR80D Arachis hypogaea HOM05D006510 ORTHO05D008171 2.5e-289 998.8 872 61.9
Rhsim04G0074900 Rhododendron simsii HOM05D006510 ORTHO05D008171 7.4e-289 997.3 873 60.9
GSVIVG01020726001 Vitis vinifera HOM05D006510 ORTHO05D008171 1.3e-288 996.5 870 62.1
MD11G1004500 Malus domestica HOM05D006510 ORTHO05D008171 2.8e-288 995.3 872 62.4
TPR.G16532 Trifolium pratense HOM05D006510 ORTHO05D008171 3.7e-288 995.0 867 61.7
Gohir.A09G003200 Gossypium hirsutum HOM05D006510 ORTHO05D008171 1.4e-287 993.0 877 61.6
Ciclev10014241m.g Citrus clementina HOM05D006510 ORTHO05D008171 9.0e-287 990.3 870 62.5
FAN05G5099 Fragaria x ananassa HOM05D006510 ORTHO05D008171 9.0e-287 990.3 871 61.1
Lj8C100T15 Lonicera japonica HOM05D006510 ORTHO05D008171 9.0e-287 990.3 888 59.6
Lalb_Chr24g0400131 Lupinus albus HOM05D006510 ORTHO05D008171 1.2e-286 989.9 867 61.8
TWI38G0436 Tripterygium wilfordii HOM05D006510 ORTHO05D008171 1.2e-286 989.9 872 63.0
FAN14G1437 Fragaria x ananassa HOM05D006510 ORTHO05D008171 1.5e-286 989.6 871 61.1
FvH4_6g27600 Fragaria vesca HOM05D006510 ORTHO05D008171 2.0e-286 989.2 871 61.1
RcHm_v2.0_Chr2g0130091 Rosa chinensis HOM05D006510 ORTHO05D008171 2.0e-286 989.2 873 62.0
TPR.G13821 Trifolium pratense HOM05D006510 ORTHO05D008171 5.9e-286 987.6 867 61.0
Glyma.06G276100 Glycine max HOM05D006510 ORTHO05D008171 1.0e-285 986.9 867 61.4
CANSAT78G1126 Cannabis sativa HOM05D006510 ORTHO05D008171 2.9e-285 985.3 876 61.9
FAN02G4134 Fragaria x ananassa HOM05D006510 ORTHO05D008171 2.9e-285 985.3 871 60.7
Glyma.12G129300 Glycine max HOM05D006510 ORTHO05D008171 2.9e-285 985.3 867 61.6
Psat7g163800 Pisum sativum HOM05D006510 ORTHO05D008171 1.6e-283 979.5 868 62.7
Potri.014G142900 Populus trichocarpa HOM05D006510 ORTHO05D008171 7.9e-283 977.2 871 60.2
Atru.chr6.2773 Acer truncatum HOM05D006510 ORTHO05D008171 8.8e-282 973.8 869 60.5
Ca_18866_v3 Cicer arietinum L. HOM05D006510 ORTHO05D008171 2.0e-281 972.6 871 63.0
CsaV3_1G037360 Cucumis sativus L. HOM05D006510 ORTHO05D008171 1.7e-277 959.5 877 59.5
PGR142G2695 Punica granatum HOM05D006510 ORTHO05D008171 1.1e-276 956.8 869 58.7
Solyc12g013950.2 Solanum lycopersicum HOM05D006510 ORTHO05D008171 1.9e-276 956.1 869 59.0
Nitab4.5_0002027g0190 Nicotiana tabacum HOM05D006510 ORTHO05D008171 4.2e-276 954.9 856 61.1
Phvul.011G128400 Phaseolus vulgaris HOM05D006510 ORTHO05D008171 4.2e-276 954.9 870 59.5
PGSC0003DMG400015368 Solanum tuberosum HOM05D006510 ORTHO05D008171 4.2e-276 954.9 869 59.1
MELO3C002806.2 Cucumis melo HOM05D006510 ORTHO05D008171 5.5e-276 954.5 877 59.0
Sopen12g005700 Solanum pennellii HOM05D006510 ORTHO05D008171 7.2e-276 954.1 870 59.2
Actinidia03942 Actinidia chinensis HOM05D006510 ORTHO05D008171 2.7e-275 952.2 830 60.8
Cc05_g08450 Coffea canephora HOM05D006510 ORTHO05D008171 1.4e-274 949.9 869 59.3
Manes.07G057100 Manihot esculenta HOM05D006510 ORTHO05D008171 8.8e-274 947.2 871 60.6
Peaxi162Scf00229g01116 Petunia axillaris HOM05D006510 ORTHO05D008171 8.8e-274 947.2 871 59.7
CAN.G1716.4 Capsicum annuum HOM05D006510 ORTHO05D008171 1.5e-273 946.4 871 59.4
DCAR_013276 Daucus carota HOM05D006510 ORTHO05D008171 4.4e-273 944.9 878 58.7
ClCG07G002720 Citrullus lanatus HOM05D006510 ORTHO05D008171 1.3e-272 943.3 883 58.4
Eucgr.K01140 Eucalyptus grandis HOM05D006510 ORTHO05D008171 3.7e-272 941.8 870 57.8
Medtr4g080110 Medicago truncatula HOM05D006510 ORTHO05D008171 9.1e-271 937.2 874 58.5
THA.LOC104823853 Tarenaya hassleriana HOM05D006510 ORTHO05D008171 2.9e-269 932.2 877 58.8
Gohir.D09G003000 Gossypium hirsutum HOM05D006510 ORTHO05D008171 1.4e-268 929.9 875 58.7
Sed0011358 Sechium edule HOM05D006510 ORTHO05D008171 1.2e-267 926.8 877 57.8
Carub.0004s2514 Capsella rubella HOM05D006510 ORTHO05D008171 2.3e-266 922.5 869 58.0
Sabra14G0108000 Salix brachista HOM05D006510 ORTHO05D008171 3.0e-266 922.2 869 58.1
Migut.M00272 Erythranthe guttata HOM05D006510 ORTHO05D008171 5.2e-266 921.4 874 59.0
AT2G42700 Arabidopsis thaliana HOM05D006510 ORTHO05D008171 1.5e-265 919.8 868 57.7
Sp4g24850 Schrenkiella parvula HOM05D006510 ORTHO05D008171 1.5e-265 919.8 873 58.1
AL4G41260 Arabidopsis lyrata HOM05D006510 ORTHO05D008171 4.8e-264 914.8 868 57.5
CARHR137800 Cardamine hirsuta HOM05D006510 ORTHO05D008171 1.1e-263 913.7 870 57.5
A05p03350 Brassica napus HOM05D006510 ORTHO05D008171 3.1e-263 912.1 868 57.4
BraA05t19323Z Brassica rapa HOM05D006510 ORTHO05D008171 4.1e-263 911.8 878 56.7
Thhalv10016247m.g Eutrema salsugineum HOM05D006510 ORTHO05D008171 1.6e-262 909.8 869 57.7
C04p03920 Brassica napus HOM05D006510 ORTHO05D008171 5.9e-262 907.9 870 56.8
Nitab4.5_0006142g0020 Nicotiana tabacum HOM05D006510 ORTHO05D008171 3.2e-260 902.1 857 58.3
ECA248G1772 Erigeron canadensis HOM05D006510 ORTHO05D008171 2.1e-259 899.4 868 56.0
Aa31LG1G24480 Aethionema arabicum HOM05D006510 ORTHO05D008171 4.7e-259 898.3 916 55.2
ATR0796G261 Amborella trichopoda HOM05D006510 ORTHO05D008171 9.4e-252 874.0 855 57.0
EL10Ac9g20963 Beta vulgaris HOM05D006510 ORTHO05D008171 5.7e-249 864.8 859 55.8
AUR62041733 Chenopodium quinoa HOM05D006510 ORTHO05D008171 1.1e-247 860.5 855 55.6
Sc12g0003550 Simmondsia chinensis HOM05D006510 ORTHO05D008171 2.4e-247 859.4 812 57.6
Os11g0169100 Oryza sativa ssp. japonica HOM05D006510 ORTHO05D008171 1.0e-245 854.0 874 54.2
BolC4t22028H Brassica oleracea HOM05D006510 ORTHO05D008171 3.3e-244 849.0 834 56.0
Oeu001793.2 Olea europaea HOM05D006510 ORTHO05D008171 4.2e-244 848.6 808 57.7
AUR62029599 Chenopodium quinoa HOM05D006510 ORTHO05D008171 4.0e-242 842.0 851 55.1
CDE04G2642 Ceratophyllum demersum HOM05D006510 ORTHO05D008171 1.1e-239 833.9 871 53.2
Hma1.2p1_0178F.1_g078700 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 2.7e-238 829.3 808 56.8
Lsat_1_v5_gn_4_64481 Lactuca sativa HOM05D006510 ORTHO05D008171 2.3e-237 826.2 861 53.2
unitig_46.g18272 Utricularia gibba HOM05D006510 ORTHO05D008171 1.0e-234 817.4 868 51.2
Ah.01g004980 Amaranthus hybridus HOM05D006510 ORTHO05D008171 1.4e-234 817.0 829 55.6
VMungo1127G1883 Vigna mungo HOM05D006510 ORTHO05D008171 5.4e-231 805.1 758 58.6
FAN09G2536 Fragaria x ananassa HOM05D006510 ORTHO05D008171 3.9e-229 798.9 757 57.5
HPP92_014652 Vanilla planifolia HOM05D006510 ORTHO05D008171 6.6e-229 798.1 862 52.7
SGA_v2.0_scaffold9G04837 Striga asiatica HOM05D006510 ORTHO05D008171 2.3e-221 773.1 869 50.6
arahy.Tifrunner.gnm1.ann1.H5IL2E Arachis hypogaea HOM05D006510 ORTHO05D008171 4.4e-209 732.3 644 61.3
Zm00001eb297610 Zea mays HOM05D006510 ORTHO05D008171 2.5e-196 689.9 762 50.4
Dinv07684 Davidia involucrata HOM05D006510 ORTHO05D008171 2.4e-194 683.3 649 58.1
vmacro09212 Vaccinium macrocarpon HOM05D006510 ORTHO05D008171 1.9e-191 673.7 817 48.2
TAR629G2876 Trochodendron aralioides HOM05D006510 ORTHO05D008171 8.7e-173 611.7 517 63.2
SEGI_27047 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 1.8e-170 604.0 735 47.3
Mapoly0047s0091 Marchantia polymorpha HOM05D006510 ORTHO05D008171 1.1e-138 498.4 859 36.4
Pp3c9_21860 Physcomitrium patens HOM05D006510 ORTHO05D008171 1.4e-133 481.5 869 36.4
SMO164G0050 Selaginella moellendorffii HOM05D006510 ORTHO05D008171 6.3e-131 472.6 854 36.7
SalBow7G4578 Salvia bowleyana HOM05D006510 ORTHO05D008171 3.5e-129 466.8 434 57.1
CBR_g35046 Chara braunii HOM05D006510 ORTHO05D008171 1.8e-101 374.8 993 31.6
Cpa.g.sc52.162 Carica papaya HOM05D006510 ORTHO05D008171 7.3e-95 352.8 323 58.2
Cpa.g.sc52.161 Carica papaya HOM05D006510 ORTHO05D008171 5.5e-42 177.2 175 56.6
TAR629G0105 Trochodendron aralioides HOM05D006510 ORTHO05D008171 1.5e-31 142.5 86 79.1
Dinv07685 Davidia involucrata HOM05D006510 ORTHO05D008171 3.5e-28 131.3 100 68.0
Cre11.g479200 Chlamydomonas reinhardtii HOM05D006510 ORTHO05D008171 7.5e-23 113.6 570 22.1
Cpa.g.c45723 Carica papaya HOM05D006510 ORTHO05D008171 5.5e-18 97.4 64 73.4
MCO09G591 Micromonas commoda HOM05D006510 ORTHO05D008171 8.0e-17 93.6 569 22.5
VMungo1127G1894 Vigna mungo HOM05D006510 ORTHO05D008171 1.4e-16 92.8 65 67.7
Hund07777 Selenicereus undatus HOM05D006510 ORTHO05D008171 2.2e-14 85.5 66 62.1
unitig_46.g18270 Utricularia gibba HOM05D006510 ORTHO05D008171 2.4e-13 82.0 65 66.2
HanXRQChr09g0251831 Helianthus annuus HOM05D006510 ORTHO05D008171 2.7e-12 78.6 57 68.4
Solyc01g011180.1 Solanum lycopersicum HOM05D006510 ORTHO05D008171 7.7e-12 77.0 56 71.4
Solyc01g011190.1 Solanum lycopersicum HOM05D006510 ORTHO05D008171 2.3e-11 75.5 56 66.1
PRCOL_00003865 Prasinoderma coloniale HOM05D006510 ORTHO05D008171 8.9e-08 63.5 610 23.1
arahy.Tifrunner.gnm1.ann1.JPYC3C Arachis hypogaea HOM05D006510 ORTHO05D008171 9.8e-07 60.1 43 65.1
SEGI_32298 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 2.9e-06 58.5 113 38.9
BraA03t11594Z Brassica rapa HOM05D006510 ORTHO05D008171 8.3e-06 57.0 101 44.6


User provided reference genes

Program Settings