Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4400 Papaver somniferum HOM05D018639 ORTHO05D003557 0.0e+00 1928.7 1124 100.0
PSO017G1908 Papaver somniferum HOM05D004299 ORTHO05D003557 0.0e+00 1181.4 1178 69.0
PSO478G3049 Papaver somniferum HOM05D004299 ORTHO05D003557 1.4e-42 179.5 1155 26.4
PSO063G4917 Papaver somniferum HOM05D018639 ORTHO05D003557 3.2e-34 151.8 219 47.9
PSO782G5567 Papaver somniferum HOM05D018639 ORTHO05D003557 4.2e-34 151.4 219 47.9
PSO017G5744 Papaver somniferum HOM05D018639 ORTHO05D003557 4.4e-31 141.4 869 27.5
PSO675G1109 Papaver somniferum HOM05D018639 ORTHO05D037265 1.4e-29 136.3 858 27.5
PSO541G1500 Papaver somniferum HOM05D018639 ORTHO05D037265 4.1e-21 108.2 246 39.0
Aqoxy3G02070 Aquilegia oxysepala HOM05D004299 ORTHO05D003557 9.1e-21 107.1 207 41.1
PSO017G4482 Papaver somniferum HOM05D018639 ORTHO05D037265 2.2e-19 102.4 210 40.0
TAR374G0649 Trochodendron aralioides HOM05D004299 ORTHO05D003557 1.5e-18 99.8 239 37.7
TAR374G1619 Trochodendron aralioides HOM05D004299 ORTHO05D003557 1.5e-18 99.8 239 37.7
Actinidia34301 Actinidia chinensis HOM05D004299 ORTHO05D003557 5.5e-18 97.8 186 38.7
GSVIVG01024444001 Vitis vinifera HOM05D004299 ORTHO05D003557 7.2e-18 97.4 267 32.6
Nn1g01977 Nelumbo nucifera HOM05D004299 ORTHO05D003557 2.1e-17 95.9 250 35.6
ECA247G1921 Erigeron canadensis HOM05D004299 ORTHO05D003557 4.7e-17 94.7 215 35.8
vmacro06502 Vaccinium macrocarpon HOM05D004299 ORTHO05D003557 1.8e-16 92.8 221 33.9
Cpa.g.sc39.57 Carica papaya HOM05D004299 ORTHO05D003557 5.2e-16 91.3 227 33.9
CSS0016343 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 1.2e-15 90.1 226 34.1
Oeu061066.1 Olea europaea HOM05D004299 ORTHO05D003557 1.2e-15 90.1 224 33.9
Atru.chr12.1996 Acer truncatum HOM05D004299 ORTHO05D003557 1.5e-15 89.7 218 35.8
PGR042G3162 Punica granatum HOM05D004299 ORTHO05D003557 1.5e-15 89.7 245 33.5
CSS0010494 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 2.6e-15 89.0 226 33.6
Manes.09G124200 Manihot esculenta HOM05D004299 ORTHO05D003557 3.4e-15 88.6 244 34.8
Dinv29171 Davidia involucrata HOM05D004299 ORTHO05D003557 5.7e-15 87.8 135 41.5
RcHm_v2.0_Chr1g0383881 Rosa chinensis HOM05D012506 ORTHO05D003557 9.8e-15 87.0 249 32.5
Haze_00596 Corylus avellana HOM05D004299 ORTHO05D003557 1.3e-14 86.7 264 32.6
CARHR196070 Cardamine hirsuta HOM05D004299 ORTHO05D003557 2.8e-14 85.5 220 37.7
Actinidia08739 Actinidia chinensis HOM05D004299 ORTHO05D003557 4.9e-14 84.7 227 33.5
Carub.0006s1534 Capsella rubella HOM05D004299 ORTHO05D003557 4.9e-14 84.7 223 35.9
Cfa015894 Carpinus fangiana HOM05D004299 ORTHO05D003557 4.9e-14 84.7 261 32.2
Medtr4g077590 Medicago truncatula HOM05D004299 ORTHO05D003557 4.9e-14 84.7 233 35.6
Psat7g171480 Pisum sativum HOM05D004299 ORTHO05D003557 6.3e-14 84.3 267 32.2
DCAR_014573 Daucus carota HOM05D004299 ORTHO05D003557 8.3e-14 84.0 225 35.1
MD01G1233900 Malus domestica HOM05D004299 ORTHO05D003557 8.3e-14 84.0 228 31.6
BcaB01g04949 Brassica carinata HOM05D004299 ORTHO05D003557 1.4e-13 83.2 216 34.7
BcaB08g36802 Brassica carinata HOM05D004299 ORTHO05D003557 1.4e-13 83.2 187 39.0
A03p08220 Brassica napus HOM05D004299 ORTHO05D003557 1.4e-13 83.2 213 37.1
BolC2t06791H Brassica oleracea HOM05D004299 ORTHO05D003557 1.4e-13 83.2 213 36.6
BcaC03g18533 Brassica carinata HOM05D004299 ORTHO05D003557 1.8e-13 82.8 213 36.6
FAN10G0189 Fragaria x ananassa HOM05D012506 ORTHO05D003557 1.8e-13 82.8 219 35.2
AL6G28200 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 2.4e-13 82.4 224 33.5
C03p09520 Brassica napus HOM05D004299 ORTHO05D003557 4.1e-13 81.6 211 35.5
BraA03t10142Z Brassica rapa HOM05D004299 ORTHO05D003557 5.4e-13 81.3 219 37.0
Nn3g19291 Nelumbo nucifera HOM05D004299 ORTHO05D003557 5.4e-13 81.3 644 23.6
Lj3A889G76 Lonicera japonica HOM05D004299 ORTHO05D003557 7.0e-13 80.9 267 31.8
BcaC04g18829 Brassica carinata HOM05D004299 ORTHO05D003557 1.2e-12 80.1 187 38.0
Rhsim03G0220700 Rhododendron simsii HOM05D004299 ORTHO05D003557 1.6e-12 79.7 88 53.4
Potri.013G081600 Populus trichocarpa HOM05D004299 ORTHO05D003557 2.0e-12 79.3 242 31.8
Sabra13G0071500 Salix brachista HOM05D004299 ORTHO05D003557 2.7e-12 79.0 240 31.7
Hund21092 Selenicereus undatus HOM05D004299 ORTHO05D003557 3.5e-12 78.6 121 45.5
TPR.G8414 Trifolium pratense HOM05D004299 ORTHO05D003557 3.5e-12 78.6 271 32.5
Ciclev10023566m.g Citrus clementina HOM05D004299 ORTHO05D003557 4.5e-12 78.2 181 37.6
FAN10G3788 Fragaria x ananassa HOM05D012506 ORTHO05D003557 4.5e-12 78.2 221 34.4
FvH4_7g33621 Fragaria vesca HOM05D012506 ORTHO05D003557 5.9e-12 77.8 219 33.8
Lj3g0021850 Lotus japonicus HOM05D004299 ORTHO05D003557 5.9e-12 77.8 252 31.7
Manes.08G164200 Manihot esculenta HOM05D004299 ORTHO05D003557 5.9e-12 77.8 249 30.5
Nitab4.5_0005081g0100 Nicotiana tabacum HOM05D004299 ORTHO05D003557 5.9e-12 77.8 214 32.2
Carub.0003s0228 Capsella rubella HOM05D004299 ORTHO05D003557 7.7e-12 77.4 243 32.1
Ca_04929_v3 Cicer arietinum L. HOM05D004299 ORTHO05D003557 1.0e-11 77.0 266 30.8
Eucgr.G02658 Eucalyptus grandis HOM05D004299 ORTHO05D003557 1.0e-11 77.0 248 31.9
BcaB01g05216 Brassica carinata HOM05D004299 ORTHO05D003557 1.7e-11 76.3 211 33.6
Duzib106G1502 Durio zibethinus HOM05D004299 ORTHO05D003557 1.7e-11 76.3 113 40.7
Gorai.004G259400 Gossypium raimondii HOM05D004299 ORTHO05D003557 1.7e-11 76.3 88 48.9
C03p60040 Brassica napus HOM05D004299 ORTHO05D003557 2.3e-11 75.9 176 38.1
BolC3t18269H Brassica oleracea HOM05D004299 ORTHO05D003557 2.3e-11 75.9 176 38.1
CiPaw.05G237300 Carya illinoinensis HOM05D004299 ORTHO05D003557 2.3e-11 75.9 574 24.6
Prupe.2G324100 Prunus persica HOM05D004299 ORTHO05D003557 2.3e-11 75.9 443 27.8
PGSC0003DMG400026934 Solanum tuberosum HOM05D004299 ORTHO05D003557 2.3e-11 75.9 260 32.3
Gohir.A08G223300 Gossypium hirsutum HOM05D004299 ORTHO05D003557 2.9e-11 75.5 88 48.9
AT5G17160 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 3.8e-11 75.1 210 32.9
Hma1.2p1_0758F.1_g213620 Hydrangea macrophylla HOM05D004299 ORTHO05D003557 3.8e-11 75.1 180 33.9
Phvul.011G021300 Phaseolus vulgaris HOM05D004299 ORTHO05D003557 3.8e-11 75.1 251 32.7
BolC3t13447H Brassica oleracea HOM05D004299 ORTHO05D003557 5.0e-11 74.7 214 35.0
Duzib128G1020 Durio zibethinus HOM05D004299 ORTHO05D003557 5.0e-11 74.7 141 38.3
Thhalv10013127m.g Eutrema salsugineum HOM05D004299 ORTHO05D003557 5.0e-11 74.7 234 31.6
HanXRQChr17g0554401 Helianthus annuus HOM05D004299 ORTHO05D003557 5.0e-11 74.7 473 25.8
Potri.019G046801 Populus trichocarpa HOM05D004299 ORTHO05D003557 5.0e-11 74.7 86 50.0
VMungo1127G2117 Vigna mungo HOM05D004299 ORTHO05D003557 5.0e-11 74.7 146 42.5
CDE02G2994 Ceratophyllum demersum HOM05D004299 ORTHO05D003557 6.6e-11 74.3 195 36.4
AUR62005909 Chenopodium quinoa HOM05D022644 ORTHO05D003557 6.6e-11 74.3 212 32.5
COL.COLO4_06387 Corchorus olitorius HOM05D004299 ORTHO05D003557 6.6e-11 74.3 237 31.6
FAN01G2289 Fragaria x ananassa HOM05D012506 ORTHO05D003557 6.6e-11 74.3 216 31.0
Peaxi162Scf00745g00852 Petunia axillaris HOM05D004299 ORTHO05D003557 6.6e-11 74.3 197 33.0
Sc19g0000210 Simmondsia chinensis HOM05D004299 ORTHO05D003557 6.6e-11 74.3 213 32.9
Gohir.D08G243500 Gossypium hirsutum HOM05D004299 ORTHO05D003557 8.6e-11 73.9 177 35.6
Sed0000182 Sechium edule HOM05D004299 ORTHO05D003557 1.5e-10 73.2 160 35.6
BNapus_Darmor_BZH_scaffold_162p00030 Brassica napus HOM05D004299 ORTHO05D003557 1.9e-10 72.8 206 32.5
BolC1t05844H Brassica oleracea HOM05D004299 ORTHO05D003557 1.9e-10 72.8 206 32.5
CsaV3_5G015680 Cucumis sativus L. HOM05D004299 ORTHO05D003557 1.9e-10 72.8 277 31.0
MBI04_g44838_MAGBIO Magnolia biondii HOM05D027374 ORTHO05D030041 1.9e-10 72.8 569 24.8
Peaxi162Scf00815g00349 Petunia axillaris HOM05D004299 ORTHO05D003557 1.9e-10 72.8 241 32.0
A06p26270 Brassica napus HOM05D004299 ORTHO05D003557 2.5e-10 72.4 203 32.5
BNapus_Darmor_BZH_scaffold_78p00020 Brassica napus HOM05D004299 ORTHO05D003557 2.5e-10 72.4 203 32.5
BraA01t04590Z Brassica rapa HOM05D004299 ORTHO05D003557 2.5e-10 72.4 203 32.5
Lsat_1_v5_gn_8_135240 Lactuca sativa HOM05D004299 ORTHO05D003557 2.5e-10 72.4 236 30.9
SalBow2G2429 Salvia bowleyana HOM05D004299 ORTHO05D003557 2.5e-10 72.4 44 77.3
unitig_52.g17695 Utricularia gibba HOM05D004299 ORTHO05D003557 2.5e-10 72.4 241 32.8
EL10Ac3g05093 Beta vulgaris HOM05D022644 ORTHO05D003557 3.3e-10 72.0 130 36.9
Migut.F00952 Erythranthe guttata HOM05D004299 ORTHO05D003557 3.3e-10 72.0 266 32.0
Glyma.12G018900 Glycine max HOM05D004299 ORTHO05D003557 3.3e-10 72.0 136 39.0
THA.LOC104802916 Tarenaya hassleriana HOM05D004299 ORTHO05D003557 3.3e-10 72.0 237 32.5
MSTRG.13 Avicennia marina HOM05D004299 ORTHO05D003557 4.3e-10 71.6 183 35.5
AT3G03130 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 5.6e-10 71.2 228 31.6
Aa31LG5G13610 Aethionema arabicum HOM05D004299 ORTHO05D003557 7.2e-10 70.9 244 29.9
CARHR077150 Cardamine hirsuta HOM05D004299 ORTHO05D003557 7.2e-10 70.9 87 51.7
Sabra19G0058100 Salix brachista HOM05D004299 ORTHO05D003557 1.2e-09 70.1 222 32.9
Solyc06g072810.4 Solanum lycopersicum HOM05D004299 ORTHO05D003557 1.2e-09 70.1 260 31.2
Ah.04g157210 Amaranthus hybridus HOM05D022644 ORTHO05D003557 1.6e-09 69.7 222 31.5
CANSAT35G1347 Cannabis sativa HOM05D004299 ORTHO05D003557 1.6e-09 69.7 139 36.7
Sed0018309 Sechium edule HOM05D004299 ORTHO05D003557 2.1e-09 69.3 242 31.8
Sopen06g029190 Solanum pennellii HOM05D004299 ORTHO05D003557 2.1e-09 69.3 262 32.1
Nitab4.5_0000115g0360 Nicotiana tabacum HOM05D004299 ORTHO05D003557 3.6e-09 68.6 239 29.7
MD07G1306000 Malus domestica HOM05D004299 ORTHO05D003557 4.7e-09 68.2 488 24.4
Zm00001eb251590 Zea mays HOM05D021310 ORTHO05D003557 4.7e-09 68.2 174 32.8
Nitab4.5_0000021g0310 Nicotiana tabacum HOM05D004299 ORTHO05D003557 6.1e-09 67.8 441 24.9
Zm00001eb188050 Zea mays HOM05D021310 ORTHO05D003557 6.1e-09 67.8 104 40.4
arahy.Tifrunner.gnm1.ann1.R3QID6 Arachis hypogaea HOM05D004299 ORTHO05D003557 8.0e-09 67.4 567 24.5
Os04g0597900 Oryza sativa ssp. japonica HOM05D021310 ORTHO05D003557 1.4e-08 66.6 58 58.6
A02p03950 Brassica napus HOM05D004299 ORTHO05D003557 1.8e-08 66.2 688 24.4
FAN03G0789 Fragaria x ananassa HOM05D012506 ORTHO05D003557 1.8e-08 66.2 212 31.1
HanXRQChr17g0541651 Helianthus annuus HOM05D004299 ORTHO05D003557 1.8e-08 66.2 39 84.6
SalBow4G2051 Salvia bowleyana HOM05D004299 ORTHO05D003557 1.8e-08 66.2 128 35.2
MELO3C005430.2 Cucumis melo HOM05D013728 ORTHO05D003557 2.3e-08 65.9 454 26.2
Lsat_1_v5_gn_3_37921 Lactuca sativa HOM05D004299 ORTHO05D003557 2.3e-08 65.9 465 25.2
Lalb_Chr01g0001001 Lupinus albus HOM05D004299 ORTHO05D003557 2.3e-08 65.9 115 41.7
Nitab4.5_0002193g0040 Nicotiana tabacum HOM05D004299 ORTHO05D003557 3.0e-08 65.5 244 30.7
Cc02_g00400 Coffea canephora HOM05D004299 ORTHO05D003557 4.0e-08 65.1 108 40.7
CDE11G0117 Ceratophyllum demersum HOM05D004299 ORTHO05D003557 5.2e-08 64.7 193 32.6
Thecc.05G208300 Theobroma cacao HOM05D004299 ORTHO05D003557 5.2e-08 64.7 472 24.8
SGA_v2.0_scaffold50G18437 Striga asiatica HOM05D024109 ORTHO05D003557 1.5e-07 63.2 33 87.9
TWI34G1775 Tripterygium wilfordii HOM05D004299 ORTHO05D003557 1.5e-07 63.2 591 24.5
ClCG01G005040 Citrullus lanatus HOM05D013728 ORTHO05D003557 2.0e-07 62.8 464 23.9
BraA02t05360Z Brassica rapa HOM05D004299 ORTHO05D003557 4.4e-07 61.6 560 25.9
Zm00001eb063140 Zea mays HOM05D021310 ORTHO05D003557 4.4e-07 61.6 61 52.5
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 5.7e-07 61.2 68 45.6
CsaV3_5G005290 Cucumis sativus L. HOM05D013728 ORTHO05D003557 5.7e-07 61.2 479 25.1
HanXRQChr05g0158421 Helianthus annuus HOM05D000441 ORTHO05D003557 1.3e-06 60.1 36 80.6
HanXRQChr12g0357091 Helianthus annuus HOM05D000441 ORTHO05D003557 1.3e-06 60.1 36 80.6
C02p08770 Brassica napus HOM05D004299 ORTHO05D003557 1.7e-06 59.7 678 23.9
MELO3C026497.2 Cucumis melo HOM05D004299 ORTHO05D003557 2.2e-06 59.3 39 66.7
Sp6g27070 Schrenkiella parvula HOM05D004299 ORTHO05D003557 2.2e-06 59.3 665 22.9
AL3G12740 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 2.9e-06 58.9 234 28.6
Sp3g02170 Schrenkiella parvula HOM05D004299 ORTHO05D003557 2.9e-06 58.9 244 28.3
BcaC01g02808 Brassica carinata HOM05D004299 ORTHO05D003557 3.7e-06 58.5 207 30.9
MELO3C026562.2 Cucumis melo HOM05D004299 ORTHO05D003557 4.9e-06 58.2 77 45.5
Zm00001eb430160 Zea mays HOM05D033178 ORTHO05D037852 4.9e-06 58.2 69 52.2
arahy.Tifrunner.gnm1.ann1.KHZX7Q Arachis hypogaea HOM05D004299 ORTHO05D003557 6.4e-06 57.8 558 24.2
QL09p025753 Quercus lobata HOM05D004299 ORTHO05D003557 6.4e-06 57.8 878 22.7
SEGI_18962 Sequoiadendron giganteum HOM05D018884 ORTHO05D384929 8.3e-06 57.4 41 65.9


User provided reference genes

Program Settings