Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4389 Papaver somniferum HOM05D000081 ORTHO05D008417 2.2e-67 258.8 129 100.0
PSO063G0390 Papaver somniferum HOM05D000081 ORTHO05D008417 1.1e-60 236.5 127 92.9
PSO339G6317 Papaver somniferum HOM05D000081 ORTHO05D008417 4.2e-55 218.0 127 86.6
TAR633G0876 Trochodendron aralioides HOM05D000081 ORTHO05D008417 5.9e-17 91.3 117 48.7
Dinv37159 Davidia involucrata HOM05D000081 ORTHO05D008417 1.0e-16 90.5 120 49.2
Nn2g11153 Nelumbo nucifera HOM05D000081 ORTHO05D008417 5.0e-16 88.2 126 47.6
Cfa017357 Carpinus fangiana HOM05D000081 ORTHO05D008417 6.6e-16 87.8 127 47.2
Hma1.2p1_0936F.1_g238870 Hydrangea macrophylla HOM05D000081 ORTHO05D008417 9.5e-15 84.0 127 44.9
Lalb_Chr01g0022561 Lupinus albus HOM05D000081 ORTHO05D008417 1.2e-14 83.6 126 41.3
Haze_20816 Corylus avellana HOM05D000081 ORTHO05D008417 2.8e-14 82.4 127 44.9
RcHm_v2.0_Chr3g0466341 Rosa chinensis HOM05D000081 ORTHO05D008417 2.8e-14 82.4 127 46.5
Psat3g139280 Pisum sativum HOM05D000081 ORTHO05D008417 3.6e-14 82.0 122 44.3
Potri.006G087000 Populus trichocarpa HOM05D000081 ORTHO05D008417 1.1e-13 80.5 127 43.3
COL.COLO4_14779 Corchorus olitorius HOM05D000181 ORTHO05D003134 1.4e-13 80.1 116 39.7
FAN05G3265 Fragaria x ananassa HOM05D000081 ORTHO05D008417 1.8e-13 79.7 129 45.0
MD12G1144100 Malus domestica HOM05D000081 ORTHO05D008417 1.8e-13 79.7 127 42.5
Manes.08G084300 Manihot esculenta HOM05D000081 ORTHO05D008417 2.3e-13 79.3 122 39.3
Prupe.6G257500 Prunus persica HOM05D000081 ORTHO05D008417 2.3e-13 79.3 116 45.7
FAN02G1604 Fragaria x ananassa HOM05D000081 ORTHO05D008417 3.1e-13 79.0 129 45.0
QL07p048759 Quercus lobata HOM05D000081 ORTHO05D008417 4.0e-13 78.6 116 44.0
FvH4_6g13470 Fragaria vesca HOM05D000081 ORTHO05D008417 5.2e-13 78.2 127 43.3
FAN14G2222 Fragaria x ananassa HOM05D000081 ORTHO05D008417 5.2e-13 78.2 127 43.3
FAN09G1616 Fragaria x ananassa HOM05D000081 ORTHO05D008417 6.8e-13 77.8 129 44.2
Potri.016G099900 Populus trichocarpa HOM05D000081 ORTHO05D008417 6.8e-13 77.8 127 42.5
TAR369G0297 Trochodendron aralioides HOM05D000081 ORTHO05D008417 6.8e-13 77.8 127 40.2
CiPaw.09G194700 Carya illinoinensis HOM05D000081 ORTHO05D008417 8.9e-13 77.4 134 39.6
Thecc.05G037200 Theobroma cacao HOM05D000081 ORTHO05D008417 8.9e-13 77.4 115 40.0
MD04G1131000 Malus domestica HOM05D000081 ORTHO05D008417 2.6e-12 75.9 127 41.7
Ciclev10013616m.g Citrus clementina HOM05D000081 ORTHO05D008417 4.4e-12 75.1 117 40.2
Duzib106G0090 Durio zibethinus HOM05D000081 ORTHO05D008417 4.4e-12 75.1 116 38.8
Medtr7g062220 Medicago truncatula HOM05D000081 ORTHO05D008417 5.8e-12 74.7 120 43.3
Sabra06G0066400 Salix brachista HOM05D000081 ORTHO05D008417 7.5e-12 74.3 128 40.6
Aqoxy2G02261 Aquilegia oxysepala HOM05D000081 ORTHO05D008417 9.8e-12 73.9 120 44.2
Nn2g13394 Nelumbo nucifera HOM05D000081 ORTHO05D008417 9.8e-12 73.9 118 46.6
Atru.chr8.1995 Acer truncatum HOM05D000081 ORTHO05D008417 1.7e-11 73.2 123 41.5
Rhsim04G0158500 Rhododendron simsii HOM05D000081 ORTHO05D008417 1.7e-11 73.2 116 44.0
TAR623G0585 Trochodendron aralioides HOM05D000081 ORTHO05D008417 1.7e-11 73.2 117 45.3
VMungo1383G0693 Vigna mungo HOM05D000081 ORTHO05D008417 1.7e-11 73.2 126 41.3
MBI05_g46007_MAGBIO Magnolia biondii HOM05D000081 ORTHO05D008417 2.9e-11 72.4 118 42.4
TWI74G1640 Tripterygium wilfordii HOM05D000081 ORTHO05D008417 2.9e-11 72.4 128 39.1
ATR0559G094 Amborella trichopoda HOM05D000081 ORTHO05D008417 4.9e-11 71.6 117 40.2
GSVIVG01034148001 Vitis vinifera HOM05D000081 ORTHO05D008417 6.4e-11 71.2 116 44.8
Phvul.008G119400 Phaseolus vulgaris HOM05D000081 ORTHO05D008417 3.2e-10 68.9 126 39.7
Actinidia05321 Actinidia chinensis HOM05D000081 ORTHO05D008417 7.0e-10 67.8 118 39.8
Duzib128G0900 Durio zibethinus HOM05D000081 ORTHO05D008417 7.0e-10 67.8 117 37.6
vmacro08644 Vaccinium macrocarpon HOM05D000081 ORTHO05D008417 1.2e-09 67.0 120 40.8
CSS0026457 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D008417 1.6e-09 66.6 128 39.1
TPR.G40440 Trifolium pratense HOM05D000081 ORTHO05D008417 1.6e-09 66.6 123 39.8
Eucgr.K03115 Eucalyptus grandis HOM05D000081 ORTHO05D008417 1.0e-08 63.9 114 37.7
CANSAT11G0955 Cannabis sativa HOM05D000081 ORTHO05D008417 1.7e-08 63.2 139 33.1
Haze_20730 Corylus avellana HOM05D000081 ORTHO05D008417 2.3e-08 62.8 117 39.3
HanXRQChr16g0499001 Helianthus annuus HOM05D000081 ORTHO05D008417 2.3e-08 62.8 109 42.2
ECA247G0532 Erigeron canadensis HOM05D000081 ORTHO05D008417 6.6e-08 61.2 111 37.8
arahy.Tifrunner.gnm1.ann1.CJ9CGG Arachis hypogaea HOM05D000081 ORTHO05D008417 2.5e-07 59.3 106 34.0
Gorai.012G104800 Gossypium raimondii HOM05D000081 ORTHO05D008417 2.5e-07 59.3 119 37.0
Cc06_g02490 Coffea canephora HOM05D000081 ORTHO05D008417 3.3e-07 58.9 109 37.6
Gohir.D04G121900 Gossypium hirsutum HOM05D000081 ORTHO05D008417 3.3e-07 58.9 119 36.1
PGR004G2790 Punica granatum HOM05D000081 ORTHO05D008417 4.3e-07 58.5 115 37.4
CiPaw.10G146700 Carya illinoinensis HOM05D000081 ORTHO05D008417 1.6e-06 56.6 117 40.2
Glyma.07G133700 Glycine max HOM05D000081 ORTHO05D008417 2.1e-06 56.2 57 52.6
Lsat_1_v5_gn_9_33061 Lactuca sativa HOM05D000081 ORTHO05D008417 2.8e-06 55.8 118 33.9
MELO3C003140.2 Cucumis melo HOM05D000081 ORTHO05D008417 3.6e-06 55.5 131 35.9
Gohir.A04G083200 Gossypium hirsutum HOM05D000081 ORTHO05D008417 3.6e-06 55.5 119 34.5
Glyma.18G183100 Glycine max HOM05D000081 ORTHO05D008417 4.7e-06 55.1 57 54.4
Gohir.D09G150400 Gossypium hirsutum HOM05D000081 ORTHO05D008417 6.2e-06 54.7 106 35.8


User provided reference genes

Program Settings