Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4364 Papaver somniferum HOM05D002916 ORTHO05D003152 1.8e-90 335.9 169 100.0
PSO478G4153 Papaver somniferum HOM05D002916 ORTHO05D003152 3.1e-66 255.4 169 78.7
PSO266G0041 Papaver somniferum HOM05D002916 ORTHO05D003152 4.1e-66 255.0 170 79.4
TAR636G0145 Trochodendron aralioides HOM05D002916 ORTHO05D003152 8.0e-30 134.4 172 48.3
Haze_00282 Corylus avellana HOM05D002916 ORTHO05D003152 2.2e-27 126.3 169 43.2
Cfa016172 Carpinus fangiana HOM05D002916 ORTHO05D003152 3.7e-27 125.6 174 42.0
CiPaw.06G042000 Carya illinoinensis HOM05D002916 ORTHO05D003152 1.4e-26 123.6 178 40.4
MBI04_g15577_MAGBIO Magnolia biondii HOM05D002916 ORTHO05D003152 4.1e-26 122.1 171 43.3
Sabra12G0011500 Salix brachista HOM05D002916 ORTHO05D003152 7.0e-26 121.3 172 41.9
QL09p007312 Quercus lobata HOM05D002916 ORTHO05D003152 9.2e-26 120.9 178 39.9
Thecc.03G207400 Theobroma cacao HOM05D002916 ORTHO05D003152 1.0e-24 117.5 178 39.9
Potri.012G022300 Populus trichocarpa HOM05D002916 ORTHO05D003152 1.3e-24 117.1 174 42.5
Duzib084G1372 Durio zibethinus HOM05D002916 ORTHO05D003152 5.0e-24 115.2 180 42.2
Nn3g18859 Nelumbo nucifera HOM05D002916 ORTHO05D003152 5.0e-24 115.2 156 44.9
Manes.01G042300 Manihot esculenta HOM05D002916 ORTHO05D003152 8.6e-24 114.4 166 41.6
Prupe.2G317800 Prunus persica HOM05D002916 ORTHO05D003152 3.3e-23 112.5 165 42.4
Potri.015G005700 Populus trichocarpa HOM05D002916 ORTHO05D003152 5.6e-23 111.7 174 41.4
QL02p027552 Quercus lobata HOM05D002916 ORTHO05D003152 9.5e-23 110.9 178 42.1
Rhsim03G0214600 Rhododendron simsii HOM05D001023 ORTHO05D000912 1.1e-21 107.5 151 43.0
TWI23G0095 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 1.1e-21 107.5 137 43.8
Manes.12G116500 Manihot esculenta HOM05D002916 ORTHO05D003152 3.1e-21 105.9 171 43.3
COL.COLO4_14359 Corchorus olitorius HOM05D002916 ORTHO05D003152 5.2e-21 105.1 181 41.4
Hma1.2p1_0094F.1_g047290 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 5.2e-21 105.1 181 39.2
Gohir.A12G246700 Gossypium hirsutum HOM05D002916 ORTHO05D003152 6.8e-21 104.8 136 45.6
Ca_16766_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 8.9e-21 104.4 165 39.4
DCAR_008976 Daucus carota HOM05D002916 ORTHO05D003152 1.2e-20 104.0 172 37.8
Actinidia34261 Actinidia chinensis HOM05D002916 ORTHO05D003152 2.0e-20 103.2 146 40.4
Gorai.008G265400 Gossypium raimondii HOM05D002916 ORTHO05D003152 2.0e-20 103.2 138 42.8
RcHm_v2.0_Chr1g0382771 Rosa chinensis HOM05D002916 ORTHO05D003152 2.0e-20 103.2 172 40.1
Gohir.D12G247400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.6e-20 102.8 138 42.8
Atru.chr12.2401 Acer truncatum HOM05D002916 ORTHO05D003152 4.4e-20 102.1 150 38.0
Haze_09193 Corylus avellana HOM05D002916 ORTHO05D003152 4.4e-20 102.1 177 36.7
DCAR_020363 Daucus carota HOM05D002916 ORTHO05D003152 4.4e-20 102.1 174 33.9
VMungo1309G2175 Vigna mungo HOM05D002916 ORTHO05D003152 4.4e-20 102.1 173 39.3
Dinv29219 Davidia involucrata HOM05D002916 ORTHO05D003152 7.5e-20 101.3 149 40.3
PGR042G3508 Punica granatum HOM05D002916 ORTHO05D003152 1.3e-19 100.5 139 42.4
Glyma.06G135000 Glycine max HOM05D002916 ORTHO05D003152 2.2e-19 99.8 170 38.8
FAN01G1170 Fragaria x ananassa HOM05D002916 ORTHO05D003152 3.7e-19 99.0 160 40.6
Glyma.04G229700 Glycine max HOM05D002916 ORTHO05D003152 4.9e-19 98.6 170 38.2
Phvul.009G046400 Phaseolus vulgaris HOM05D002916 ORTHO05D003152 6.4e-19 98.2 143 39.9
Psat5g073040 Pisum sativum HOM05D002916 ORTHO05D003152 6.4e-19 98.2 172 39.0
CDE12G0661 Ceratophyllum demersum HOM05D002916 ORTHO05D003152 1.1e-18 97.4 127 39.4
Eucgr.K00425 Eucalyptus grandis HOM05D002916 ORTHO05D003152 1.1e-18 97.4 150 37.3
FAN10G0037 Fragaria x ananassa HOM05D002916 ORTHO05D003152 2.4e-18 96.3 160 38.8
Duzib068G0006 Durio zibethinus HOM05D002916 ORTHO05D003152 3.2e-18 95.9 132 42.4
FAN10G3649 Fragaria x ananassa HOM05D002916 ORTHO05D003152 3.2e-18 95.9 160 39.4
ClCG01G000110 Citrullus lanatus HOM05D002916 ORTHO05D003152 7.0e-18 94.7 148 37.8
CsaV3_5G000050 Cucumis sativus L. HOM05D002916 ORTHO05D003152 2.1e-17 93.2 149 38.3
ATR0078G023 Amborella trichopoda HOM05D002916 ORTHO05D003152 2.7e-17 92.8 174 38.5
CANSAT21G0001 Cannabis sativa HOM05D002916 ORTHO05D003152 6.0e-17 91.7 155 40.0
MELO3C005922.2 Cucumis melo HOM05D002916 ORTHO05D003152 6.0e-17 91.7 149 36.2
Sed0016396 Sechium edule HOM05D002916 ORTHO05D003152 1.7e-16 90.1 140 33.6
Ciclev10012941m.g Citrus clementina HOM05D002916 ORTHO05D003152 2.3e-16 89.7 151 36.4
Duzib093G0112 Durio zibethinus HOM05D002916 ORTHO05D003152 6.6e-16 88.2 149 37.6
Nn6g34891 Nelumbo nucifera HOM05D002916 ORTHO05D003152 8.6e-16 87.8 136 37.5
Sabra05G0140200 Salix brachista HOM05D002916 ORTHO05D003152 8.6e-16 87.8 169 34.9
FAN03G0202 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.1e-15 87.4 123 42.3
Lalb_Chr08g0239761 Lupinus albus HOM05D002916 ORTHO05D003152 1.5e-15 87.0 142 41.5
COL.COLO4_29727 Corchorus olitorius HOM05D002916 ORTHO05D003152 7.3e-15 84.7 155 36.8
RcHm_v2.0_Chr3g0473821 Rosa chinensis HOM05D002916 ORTHO05D003152 1.2e-14 84.0 180 31.7
FvH4_6g18810 Fragaria vesca HOM05D002916 ORTHO05D003152 3.6e-14 82.4 180 31.7
FAN14G1204 Fragaria x ananassa HOM05D002916 ORTHO05D003152 3.6e-14 82.4 180 31.7
Atru.chr8.1530 Acer truncatum HOM05D002916 ORTHO05D003152 4.7e-14 82.0 154 36.4
FAN05G4254 Fragaria x ananassa HOM05D002916 ORTHO05D003152 4.7e-14 82.0 152 33.6
FAN02G4366 Fragaria x ananassa HOM05D002916 ORTHO05D003152 6.2e-14 81.6 180 31.1
Atru.chr8.1528 Acer truncatum HOM05D002916 ORTHO05D003152 8.1e-14 81.3 155 36.8
FAN05G3486 Fragaria x ananassa HOM05D002916 ORTHO05D003152 8.1e-14 81.3 152 33.6
Manes.08G025700 Manihot esculenta HOM05D002916 ORTHO05D003152 8.1e-14 81.3 151 34.4
SalBow6G0378 Salvia bowleyana HOM05D002916 ORTHO05D003152 1.4e-13 80.5 139 37.4
Cpa.g.sc5.15 Carica papaya HOM05D002916 ORTHO05D003152 3.1e-13 79.3 156 34.6
DCAR_013392 Daucus carota HOM05D002916 ORTHO05D003152 4.0e-13 79.0 177 30.5
Potri.006G213100 Populus trichocarpa HOM05D002916 ORTHO05D003152 4.0e-13 79.0 183 31.1
Aqoxy4G02773 Aquilegia oxysepala HOM05D002916 ORTHO05D003152 6.8e-13 78.2 152 31.6
Duzib128G0442 Durio zibethinus HOM05D002916 ORTHO05D003152 6.8e-13 78.2 149 34.9
Glyma.03G196300 Glycine max HOM05D002916 ORTHO05D003152 6.8e-13 78.2 177 30.5
TPR.G36204 Trifolium pratense HOM05D002916 ORTHO05D003152 6.8e-13 78.2 140 35.7
Prupe.7G109500 Prunus persica HOM05D002916 ORTHO05D003152 8.9e-13 77.8 150 30.7
SEGI_19412 Sequoiadendron giganteum HOM05D002916 ORTHO05D003152 1.2e-12 77.4 160 34.4
Thecc.05G089800 Theobroma cacao HOM05D002916 ORTHO05D003152 1.2e-12 77.4 180 32.2
VMungo1383G0514 Vigna mungo HOM05D002916 ORTHO05D003152 1.5e-12 77.0 181 30.9
Gorai.002G239800 Gossypium raimondii HOM05D002916 ORTHO05D003152 2.0e-12 76.6 155 34.2
AUR62035612 Chenopodium quinoa HOM05D002916 ORTHO05D003152 3.4e-12 75.9 129 33.3
Manes.09G055000 Manihot esculenta HOM05D002916 ORTHO05D003152 3.4e-12 75.9 178 29.8
Nn2g14164 Nelumbo nucifera HOM05D002916 ORTHO05D003152 4.4e-12 75.5 153 34.6
Rhsim03G0074900 Rhododendron simsii HOM05D002916 ORTHO05D003152 4.4e-12 75.5 157 33.1
Glyma.19G194943 Glycine max HOM05D002916 ORTHO05D003152 5.8e-12 75.1 180 32.2
Gohir.D01G195600 Gossypium hirsutum HOM05D002916 ORTHO05D003152 5.8e-12 75.1 155 34.2
Lalb_Chr01g0018131 Lupinus albus HOM05D002916 ORTHO05D003152 5.8e-12 75.1 182 30.2
Medtr3g092470 Medicago truncatula HOM05D002916 ORTHO05D003152 7.5e-12 74.7 143 37.8
DCAR_013389 Daucus carota HOM05D002916 ORTHO05D003152 9.9e-12 74.3 149 32.2
DCAR_013390 Daucus carota HOM05D002916 ORTHO05D003152 9.9e-12 74.3 149 32.2
Glyma.10G072400 Glycine max HOM05D002916 ORTHO05D003152 1.3e-11 73.9 185 33.0
Ciclev10013433m.g Citrus clementina HOM05D002916 ORTHO05D003152 1.7e-11 73.6 162 32.7
Dinv31688 Davidia involucrata HOM05D004140 ORTHO05D006116 1.7e-11 73.6 181 31.5
Sc13g0010210 Simmondsia chinensis HOM05D002916 ORTHO05D003152 1.7e-11 73.6 117 39.3
EL10Ac3g05193 Beta vulgaris HOM05D002916 ORTHO05D003152 2.2e-11 73.2 136 32.4
Gohir.A01G206200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.2e-11 73.2 154 33.1
Sabra16G0085600 Salix brachista HOM05D002916 ORTHO05D003152 2.2e-11 73.2 149 32.2
Gohir.D09G135200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.9e-11 72.8 153 34.6
Gorai.006G155100 Gossypium raimondii HOM05D002916 ORTHO05D003152 2.9e-11 72.8 153 34.6
Oeu047865.1 Olea europaea HOM05D002916 ORTHO05D003152 2.9e-11 72.8 179 30.7
AUR62006014 Chenopodium quinoa HOM05D002916 ORTHO05D003152 3.7e-11 72.4 130 30.8
Sabra16G0087700 Salix brachista HOM05D002916 ORTHO05D003152 4.9e-11 72.0 149 32.2
Gohir.A07G134900 Gossypium hirsutum HOM05D002916 ORTHO05D003152 6.4e-11 71.6 153 34.6
Ca_09009_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 8.3e-11 71.2 178 28.7
Cc06_g05820 Coffea canephora HOM05D002916 ORTHO05D003152 8.3e-11 71.2 151 33.8
Phvul.001G190500 Phaseolus vulgaris HOM05D002916 ORTHO05D003152 8.3e-11 71.2 181 29.3
Peaxi162Scf00404g00102 Petunia axillaris HOM05D002916 ORTHO05D003152 1.1e-10 70.9 190 30.5
Cfa011906 Carpinus fangiana HOM05D002916 ORTHO05D003152 1.9e-10 70.1 81 42.0
Sed0018474 Sechium edule HOM05D002916 ORTHO05D003152 1.9e-10 70.1 152 30.3
Sabra15G0004100 Salix brachista HOM05D002916 ORTHO05D003152 2.4e-10 69.7 170 34.7
Lj1g0017693 Lotus japonicus HOM05D002916 ORTHO05D003152 3.2e-10 69.3 155 30.3
AUR62006186 Chenopodium quinoa HOM05D002916 ORTHO05D003152 4.1e-10 68.9 152 32.2
Gohir.A04G062400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 4.1e-10 68.9 154 29.9
MD12G1036700 Malus domestica HOM05D002916 ORTHO05D003152 4.1e-10 68.9 155 30.3
Gohir.D04G099400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 5.4e-10 68.6 153 29.4
Gorai.009G402300 Gossypium raimondii HOM05D002916 ORTHO05D003152 5.4e-10 68.6 153 29.4
EL10Ac3g05192 Beta vulgaris HOM05D002916 ORTHO05D003152 7.1e-10 68.2 107 35.5
Potri.016G079700 Populus trichocarpa HOM05D002916 ORTHO05D003152 7.1e-10 68.2 150 34.0
TAR623G0367 Trochodendron aralioides HOM05D002916 ORTHO05D003152 1.2e-09 67.4 100 41.0
Lalb_Chr11g0067321 Lupinus albus HOM05D002916 ORTHO05D003152 1.6e-09 67.0 138 36.2
TWI53G0172 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 1.6e-09 67.0 158 34.2
Ah.13g070720 Amaranthus hybridus HOM05D002916 ORTHO05D003152 2.7e-09 66.2 167 25.1
AUR62028520 Chenopodium quinoa HOM05D002916 ORTHO05D003152 2.7e-09 66.2 152 32.2
Gohir.A05G000100 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.7e-09 66.2 153 34.0
Gohir.A11G003500 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.7e-09 66.2 148 33.8
MD14G1023400 Malus domestica HOM05D002916 ORTHO05D003152 3.5e-09 65.9 158 27.8
CsaV3_6G040690 Cucumis sativus L. HOM05D002916 ORTHO05D003152 4.6e-09 65.5 157 28.7
TWI74G0225 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 6.0e-09 65.1 150 32.0
MSTRG.26638 Avicennia marina HOM05D002916 ORTHO05D003152 7.8e-09 64.7 184 29.9
CANSAT64G0492 Cannabis sativa HOM05D002916 ORTHO05D003152 7.8e-09 64.7 186 31.2
Gohir.A09G139400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 7.8e-09 64.7 111 36.9
Thhalv10021626m.g Eutrema salsugineum HOM05D002916 ORTHO05D003152 1.3e-08 63.9 175 29.7
MELO3C024547.2 Cucumis melo HOM05D002916 ORTHO05D003152 3.9e-08 62.4 159 27.7
THA.LOC104816397 Tarenaya hassleriana HOM05D002916 ORTHO05D003152 3.9e-08 62.4 170 27.1
Actinidia31270 Actinidia chinensis HOM05D002916 ORTHO05D003152 5.1e-08 62.0 142 31.7
C03p01810 Brassica napus HOM05D002916 ORTHO05D003152 8.6e-08 61.2 172 28.5
BcaC09g48115 Brassica carinata HOM05D002916 ORTHO05D003152 2.5e-07 59.7 166 28.3
BolC1t05420H Brassica oleracea HOM05D002916 ORTHO05D003152 3.3e-07 59.3 167 28.1
C05p58000 Brassica napus HOM05D002916 ORTHO05D003152 4.3e-07 58.9 157 28.0
Migut.F00158 Erythranthe guttata HOM05D002916 ORTHO05D003152 4.3e-07 58.9 191 30.9
BcaB04g21229 Brassica carinata HOM05D002916 ORTHO05D003152 5.6e-07 58.5 197 25.4
BcaNung06240 Brassica carinata HOM05D002916 ORTHO05D003152 7.3e-07 58.2 157 27.4
Sp3g08400 Schrenkiella parvula HOM05D002916 ORTHO05D003152 1.2e-06 57.4 170 28.2
ATR0602G273 Amborella trichopoda HOM05D026466 ORTHO05D003152 1.6e-06 57.0 153 26.8
BraA05t22688Z Brassica rapa HOM05D002916 ORTHO05D003152 2.1e-06 56.6 158 27.2
DCAR_009166 Daucus carota HOM05D002916 ORTHO05D003152 2.1e-06 56.6 183 26.8
Carub.0008s0814 Capsella rubella HOM05D002916 ORTHO05D003152 2.8e-06 56.2 173 27.7
FvH4_7g32830 Fragaria vesca HOM05D002916 ORTHO05D003152 2.8e-06 56.2 158 31.0
A05p38970 Brassica napus HOM05D002916 ORTHO05D003152 3.6e-06 55.8 158 27.2
Migut.L01781 Erythranthe guttata HOM05D002916 ORTHO05D003152 3.6e-06 55.8 158 28.5
Lsat_1_v5_gn_5_164861 Lactuca sativa HOM05D002916 ORTHO05D003152 3.6e-06 55.8 134 28.4
BcaNung05911 Brassica carinata HOM05D002916 ORTHO05D003152 4.7e-06 55.5 199 26.6
BolC5t34456H Brassica oleracea HOM05D002916 ORTHO05D003152 4.7e-06 55.5 156 26.3
PSO339G4347 Papaver somniferum HOM05D002916 ORTHO05D003152 4.7e-06 55.5 169 26.6
Sabra06G0164100 Salix brachista HOM05D002916 ORTHO05D003152 4.7e-06 55.5 119 34.5


User provided reference genes

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