Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 1.2e-129 466.5 235 100.0
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 4.6e-116 421.4 235 93.2
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 3.2e-101 372.1 238 82.8
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 5.2e-27 125.6 261 38.3
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 2.5e-21 106.7 237 36.3
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.2e-20 104.4 254 37.0
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 3.7e-17 92.8 237 35.0
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.4e-16 90.1 263 31.6
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 9.2e-16 88.2 264 33.0
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.8e-15 85.1 264 31.1
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.0e-14 84.7 264 31.1
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.3e-14 84.3 221 32.6
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 1.7e-14 84.0 254 33.9
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 3.0e-14 83.2 232 31.0
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 5.0e-14 82.4 221 32.1
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 6.6e-14 82.0 245 32.2
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 8.6e-14 81.6 208 32.7
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.1e-13 81.3 258 32.9
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 1.5e-13 80.9 273 28.2
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 1.9e-13 80.5 244 30.7
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 1.9e-13 80.5 273 29.7
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 4.3e-13 79.3 261 31.8
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 7.3e-13 78.6 203 32.5
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 7.3e-13 78.6 227 30.0
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.2e-12 77.8 248 29.8
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.6e-12 77.4 205 33.2
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 3.6e-12 76.3 234 30.8
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 8.0e-12 75.1 220 33.6
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 1.0e-11 74.7 241 33.6
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 1.4e-11 74.3 251 30.7
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.1e-11 73.2 232 33.6
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 5.2e-11 72.4 202 33.7
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 6.8e-11 72.0 210 30.0
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 6.8e-11 72.0 218 33.0
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 6.8e-11 72.0 244 32.8
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 1.2e-10 71.2 232 30.2
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 2.0e-10 70.5 266 28.2
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 2.0e-10 70.5 219 30.1
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 2.6e-10 70.1 218 32.1
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 3.4e-10 69.7 222 31.5
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 9.8e-10 68.2 260 30.8
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 1.3e-09 67.8 180 31.7
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 1.7e-09 67.4 202 33.7
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 2.2e-09 67.0 233 29.6
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 3.7e-09 66.2 230 28.7
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 3.7e-09 66.2 141 38.3
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 3.7e-09 66.2 219 32.9
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 4.9e-09 65.9 235 31.5
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 6.4e-09 65.5 213 28.2
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 6.4e-09 65.5 249 30.5
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 8.3e-09 65.1 210 29.0
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.1e-08 64.7 202 32.2
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 1.4e-08 64.3 234 30.3
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 1.9e-08 63.9 238 28.6
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.9e-08 63.9 183 32.2
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 4.1e-08 62.8 255 30.6
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 4.1e-08 62.8 255 30.6
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 5.4e-08 62.4 202 32.7
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.2e-07 61.2 176 31.2
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 1.6e-07 60.8 99 33.3
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 2.0e-07 60.5 272 30.1
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 2.7e-07 60.1 234 29.5
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 2.7e-07 60.1 171 28.7
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 2.7e-07 60.1 160 34.4
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 4.6e-07 59.3 216 30.6
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 6.0e-07 58.9 257 29.2
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 6.0e-07 58.9 182 33.0
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 6.0e-07 58.9 147 33.3
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 7.8e-07 58.5 240 29.2
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 7.8e-07 58.5 176 35.8
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.7e-06 57.4 248 28.2
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.3e-06 57.0 162 31.5
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.3e-06 57.0 146 31.5
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 5.0e-06 55.8 133 34.6
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 5.0e-06 55.8 209 30.6
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 8.6e-06 55.1 155 34.2


User provided reference genes

Program Settings