Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4214 Papaver somniferum HOM05D004875 ORTHO05D005598 1.7e-123 446.0 227 100.0
PSO541G6542 Papaver somniferum HOM05D004875 ORTHO05D005598 1.5e-55 220.3 204 58.8
PSO532G0016 Papaver somniferum HOM05D004875 ORTHO05D005598 7.9e-49 198.0 207 50.2
PSO541G1704 Papaver somniferum HOM05D004875 ORTHO05D005598 1.0e-48 197.6 207 50.2
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 3.5e-44 182.6 228 46.5
Thhalv10012545m.g Eutrema salsugineum HOM05D004875 ORTHO05D005598 1.7e-43 180.3 228 46.1
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 1.7e-43 180.3 245 45.3
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 2.2e-43 179.9 228 45.6
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 2.9e-43 179.5 228 45.6
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 3.8e-43 179.1 228 45.6
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 3.8e-43 179.1 228 46.1
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 3.8e-43 179.1 228 46.1
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 3.8e-43 179.1 245 44.5
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 3.8e-43 179.1 228 47.4
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 6.5e-43 178.3 228 45.6
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 6.5e-43 178.3 228 46.1
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 6.5e-43 178.3 228 46.1
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 6.5e-43 178.3 228 47.8
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 8.5e-43 177.9 227 46.3
Actinidia32610 Actinidia chinensis HOM05D004875 ORTHO05D005598 1.1e-42 177.6 228 45.6
Nitab4.5_0000002g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 1.5e-42 177.2 245 44.1
Peaxi162Scf00055g01011 Petunia axillaris HOM05D004875 ORTHO05D005598 1.5e-42 177.2 244 44.3
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 1.9e-42 176.8 228 46.1
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 1.9e-42 176.8 243 43.6
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 1.9e-42 176.8 228 45.6
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 1.9e-42 176.8 228 45.6
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 2.5e-42 176.4 228 45.2
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 2.5e-42 176.4 244 43.4
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 3.2e-42 176.0 228 44.7
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 3.2e-42 176.0 228 45.6
Dinv09669 Davidia involucrata HOM05D004875 ORTHO05D005598 4.2e-42 175.6 245 43.7
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 4.2e-42 175.6 247 43.3
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 5.5e-42 175.3 245 43.7
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 5.5e-42 175.3 243 44.4
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 5.5e-42 175.3 245 43.7
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 7.2e-42 174.9 227 44.5
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 7.2e-42 174.9 245 43.3
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 7.2e-42 174.9 245 44.5
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 9.4e-42 174.5 227 44.9
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 9.4e-42 174.5 245 42.9
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 1.2e-41 174.1 228 44.7
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 1.2e-41 174.1 228 44.7
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 1.6e-41 173.7 227 44.9
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 1.6e-41 173.7 245 42.9
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 1.6e-41 173.7 228 44.3
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 1.6e-41 173.7 245 43.7
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 1.6e-41 173.7 245 44.1
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 2.1e-41 173.3 243 44.0
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 2.1e-41 173.3 247 42.9
MELO3C025695.2 Cucumis melo HOM05D004875 ORTHO05D005598 3.6e-41 172.6 228 44.3
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 3.6e-41 172.6 245 42.9
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 4.7e-41 172.2 227 45.4
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 6.1e-41 171.8 243 41.6
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 6.1e-41 171.8 228 44.7
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 1.0e-40 171.0 245 42.0
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 1.4e-40 170.6 228 44.7
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 1.4e-40 170.6 228 44.3
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 1.4e-40 170.6 228 44.3
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 1.8e-40 170.2 246 43.9
Atru.chr3.4118 Acer truncatum HOM05D004875 ORTHO05D005598 2.3e-40 169.9 245 42.4
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 2.3e-40 169.9 246 43.5
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.3e-40 169.9 228 44.3
Solyc09g057910.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 2.3e-40 169.9 245 43.3
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 3.0e-40 169.5 228 43.9
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 3.0e-40 169.5 228 44.7
Cpa.g.sc2.355 Carica papaya HOM05D004875 ORTHO05D005598 4.0e-40 169.1 247 42.1
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 4.0e-40 169.1 228 43.9
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 4.0e-40 169.1 245 42.9
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 5.2e-40 168.7 245 41.6
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 6.7e-40 168.3 245 42.0
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 6.7e-40 168.3 245 42.0
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 6.7e-40 168.3 245 42.0
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 8.8e-40 167.9 228 42.5
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 1.1e-39 167.5 228 44.7
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 1.1e-39 167.5 250 42.0
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 1.1e-39 167.5 228 43.9
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 1.5e-39 167.2 246 42.7
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 1.5e-39 167.2 228 43.4
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 2.0e-39 166.8 226 43.4
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.0e-39 166.8 228 43.9
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 2.6e-39 166.4 245 41.6
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 2.6e-39 166.4 244 41.4
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 3.3e-39 166.0 245 42.0
Oeu019275.2 Olea europaea HOM05D004875 ORTHO05D005598 5.7e-39 165.2 249 41.4
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 5.7e-39 165.2 214 44.9
Nitab4.5_0005130g0040 Nicotiana tabacum HOM05D004875 ORTHO05D005598 7.5e-39 164.9 269 40.1
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 9.7e-39 164.5 245 41.2
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 9.7e-39 164.5 245 41.6
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 1.7e-38 163.7 228 42.5
PSO765G0012 Papaver somniferum HOM05D004875 ORTHO05D005598 2.2e-38 163.3 211 46.0
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 2.8e-38 162.9 228 44.3
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 3.7e-38 162.5 229 43.7
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 3.7e-38 162.5 228 43.4
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 3.7e-38 162.5 227 43.2
Sc12g0001960 Simmondsia chinensis HOM05D004875 ORTHO05D005598 4.8e-38 162.2 222 43.7
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 1.1e-37 161.0 257 40.5
PSO349G0337 Papaver somniferum HOM05D004875 ORTHO05D005598 1.4e-37 160.6 222 43.2
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 1.4e-37 160.6 245 41.2
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 2.4e-37 159.8 228 43.0
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 5.3e-37 158.7 244 40.6
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 1.6e-36 157.1 250 40.0
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 3.5e-36 156.0 250 40.0
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 2.2e-35 153.3 229 40.2
PSO541G5558 Papaver somniferum HOM05D004875 ORTHO05D005598 1.5e-34 150.6 204 45.1
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 3.6e-33 146.0 314 33.8
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 7.5e-31 138.3 233 39.5
AagrBONN_evm.TU.Sc2ySwM_228.3164 Anthoceros agrestis HOM05D004875 ORTHO05D005598 4.5e-28 129.0 211 37.0
Mapoly0170s0019 Marchantia polymorpha HOM05D004875 ORTHO05D005598 3.8e-27 125.9 196 38.8
SEGI_14366 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 3.2e-26 122.9 169 45.6
CDE04G2228 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 1.2e-25 120.9 170 42.9
Pp3c18_5510 Physcomitrium patens HOM05D004875 ORTHO05D005598 1.2e-25 120.9 225 34.7
CAN.G3.44 Capsicum annuum HOM05D004875 ORTHO05D005598 4.9e-22 109.0 106 52.8
CBR_g50477 Chara braunii HOM05D004875 ORTHO05D005598 4.7e-17 92.4 209 31.6
PSO170G3032 Papaver somniferum HOM05D004875 ORTHO05D005598 3.4e-15 86.3 218 30.7
C04p28250 Brassica napus HOM05D004875 ORTHO05D005598 3.5e-12 76.3 159 35.2
BolC4t24370H Brassica oleracea HOM05D004875 ORTHO05D005598 3.5e-12 76.3 159 35.2
SHI19217 Sapria himalayana HOM05D004875 ORTHO05D005598 5.0e-11 72.4 160 35.6
Zm00001eb286340 Zea mays HOM05D004875 ORTHO05D005598 9.5e-10 68.2 75 50.7
MCO11G770 Micromonas commoda HOM05D004875 ORTHO05D005598 4.7e-09 65.9 212 24.5
C01p15940 Brassica napus HOM05D004875 ORTHO05D005598 8.0e-09 65.1 52 59.6
BolC8t47222H Brassica oleracea HOM05D004875 ORTHO05D005598 9.8e-07 58.2 60 51.7
PGSC0003DMG400004010 Solanum tuberosum HOM05D004875 ORTHO05D005598 2.9e-06 56.6 61 49.2


User provided reference genes

Program Settings