Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3987 Papaver somniferum HOM05D020914 ORTHO05D001888 1.7e-91 339.3 178 100.0
PSO017G3787 Papaver somniferum HOM05D020914 ORTHO05D023578 2.0e-87 325.9 178 96.1
TAR622G1131 Trochodendron aralioides HOM05D008070 ORTHO05D001888 8.2e-25 117.9 165 44.8
TAR629G1731 Trochodendron aralioides HOM05D008070 ORTHO05D001888 5.9e-23 111.7 173 42.8
Eucgr.H02532 Eucalyptus grandis HOM05D008070 ORTHO05D001888 2.6e-18 96.3 176 37.5
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 3.8e-14 82.4 171 35.1
CDE04G3015 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 5.0e-14 82.0 150 36.0
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 8.5e-14 81.3 173 34.7
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 1.4e-13 80.5 165 35.8
Aqoxy1G03527 Aquilegia oxysepala HOM05D020914 ORTHO05D023578 4.2e-13 79.0 178 32.6
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 4.2e-13 79.0 169 35.5
MBI10_g44381_MAGBIO Magnolia biondii HOM05D008070 ORTHO05D001888 5.5e-13 78.6 147 36.1
Aqoxy2G01248 Aquilegia oxysepala HOM05D020914 ORTHO05D023578 1.6e-12 77.0 178 32.0
ATR1152G035 Amborella trichopoda HOM05D008070 ORTHO05D001888 3.6e-12 75.9 178 35.4
CDE06G1547 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 4.7e-12 75.5 150 34.0
Nn3g16774 Nelumbo nucifera HOM05D008070 ORTHO05D001888 8.0e-12 74.7 169 36.1
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 1.0e-11 74.3 141 34.8
Atru.chr11.2085 Acer truncatum HOM05D008070 ORTHO05D001888 3.0e-11 72.8 167 34.1
Atru.chr11.2086 Acer truncatum HOM05D008070 ORTHO05D001888 3.0e-11 72.8 167 34.1
Aqoxy2G01250 Aquilegia oxysepala HOM05D020914 ORTHO05D023578 3.0e-11 72.8 178 30.9
CARHR023800 Cardamine hirsuta HOM05D008070 ORTHO05D001888 3.0e-11 72.8 165 32.1
Manes.12G025200 Manihot esculenta HOM05D008070 ORTHO05D001888 5.2e-11 72.0 163 34.4
Aqoxy3G02842 Aquilegia oxysepala HOM05D020914 ORTHO05D023578 1.1e-10 70.9 178 29.8
QL03p058730 Quercus lobata HOM05D008070 ORTHO05D001888 1.1e-10 70.9 170 32.4
Duzib251G0841 Durio zibethinus HOM05D008070 ORTHO05D001888 1.5e-10 70.5 178 31.5
Actinidia19773 Actinidia chinensis HOM05D003556 ORTHO05D003404 2.0e-10 70.1 142 33.1
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 2.0e-10 70.1 184 31.5
TWI75G1444 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 2.0e-10 70.1 170 30.6
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 2.6e-10 69.7 157 32.5
CDE07G0112 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 3.3e-10 69.3 152 30.3
CDE06G2294 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 4.4e-10 68.9 152 30.3
Manes.13G026900 Manihot esculenta HOM05D008070 ORTHO05D001888 4.4e-10 68.9 169 30.2
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 1.3e-09 67.4 173 30.6
COL.COLO4_24233 Corchorus olitorius HOM05D008070 ORTHO05D001888 2.2e-09 66.6 170 31.2
Sed0009222 Sechium edule HOM05D005742 ORTHO05D001888 2.2e-09 66.6 161 28.0
AT1G23350 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 4.8e-09 65.5 158 29.7
TWI36G0098 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 4.8e-09 65.5 161 32.3
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 8.2e-09 64.7 173 31.8
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 1.1e-08 64.3 163 29.4
Eucgr.H01005 Eucalyptus grandis HOM05D005742 ORTHO05D001888 1.4e-08 63.9 141 30.5
unitig_23.g29657 Utricularia gibba HOM05D009745 ORTHO05D011350 3.1e-08 62.8 162 30.9
unitig_25.g30577 Utricularia gibba HOM05D009745 ORTHO05D011350 3.1e-08 62.8 162 30.9
Nitab4.5_0010155g0010 Nicotiana tabacum HOM05D000036 ORTHO05D000441 4.1e-08 62.4 127 33.1
MELO3C017910.2 Cucumis melo HOM05D005742 ORTHO05D001888 5.3e-08 62.0 170 25.9
unitig_22.g6453 Utricularia gibba HOM05D009745 ORTHO05D011350 5.3e-08 62.0 162 30.9
Atru.chr4.3013 Acer truncatum HOM05D005742 ORTHO05D001888 7.0e-08 61.6 139 33.1
CsaV3_4G001290 Cucumis sativus L. HOM05D005742 ORTHO05D001888 7.0e-08 61.6 154 24.7
Thhalv10008931m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 7.0e-08 61.6 168 28.6
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 9.1e-08 61.2 142 27.5
Carub.0002s1726 Capsella rubella HOM05D008070 ORTHO05D001888 1.2e-07 60.8 167 29.3
ClCG10G011490 Citrullus lanatus HOM05D005742 ORTHO05D001888 1.2e-07 60.8 153 25.5
Ciclev10032926m.g Citrus clementina HOM05D008070 ORTHO05D001888 2.0e-07 60.1 180 30.0
BcaB03g11935 Brassica carinata HOM05D008070 ORTHO05D001888 2.6e-07 59.7 173 27.2
Thhalv10019249m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 2.6e-07 59.7 162 27.8
AL1G37150 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 3.5e-07 59.3 166 26.5
AT1G70540 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 3.5e-07 59.3 169 27.2
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 3.5e-07 59.3 143 26.6
AL2G29930 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 4.5e-07 58.9 169 27.2
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 4.5e-07 58.9 160 28.1
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 4.5e-07 58.9 160 28.1
Nn3g21713 Nelumbo nucifera HOM05D005742 ORTHO05D001888 4.5e-07 58.9 157 28.0
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 4.5e-07 58.9 143 28.7
MSTRG.24819 Avicennia marina HOM05D005742 ORTHO05D001888 7.7e-07 58.2 149 27.5
BcaC07g39196 Brassica carinata HOM05D008070 ORTHO05D001888 7.7e-07 58.2 169 26.6
BolC8t49825H Brassica oleracea HOM05D008070 ORTHO05D001888 7.7e-07 58.2 169 26.6
CARHR063750 Cardamine hirsuta HOM05D008070 ORTHO05D001888 7.7e-07 58.2 169 29.0
Thhalv10022426m.g Eutrema salsugineum HOM05D005742 ORTHO05D001888 7.7e-07 58.2 142 28.9
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 1.0e-06 57.8 143 28.7
C08p21860 Brassica napus HOM05D008070 ORTHO05D001888 1.0e-06 57.8 163 27.0
Sp5g25690 Schrenkiella parvula HOM05D008070 ORTHO05D001888 1.0e-06 57.8 168 28.0
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 1.3e-06 57.4 145 29.7
Thhalv10013056m.g Eutrema salsugineum HOM05D000036 ORTHO05D000095 1.3e-06 57.4 122 29.5
MBI19_g03227_MAGBIO Magnolia biondii HOM05D005742 ORTHO05D001888 1.3e-06 57.4 156 27.6
Peaxi162Scf00065g01216 Petunia axillaris HOM05D000036 ORTHO05D000441 1.3e-06 57.4 127 31.5
Aa31LG7G7380 Aethionema arabicum HOM05D008070 ORTHO05D001888 1.7e-06 57.0 166 25.9
Lj1g0003432 Lotus japonicus HOM05D000036 ORTHO05D000095 1.7e-06 57.0 143 29.4
THA.LOC104818886 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 1.7e-06 57.0 143 26.6
BcaC04g20462 Brassica carinata HOM05D000036 ORTHO05D000095 2.2e-06 56.6 124 29.0
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 2.2e-06 56.6 160 27.5
C09p43210 Brassica napus HOM05D000036 ORTHO05D000095 2.2e-06 56.6 124 29.0
BolC9t57194H Brassica oleracea HOM05D000036 ORTHO05D000095 2.2e-06 56.6 124 29.0
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 2.2e-06 56.6 160 27.5
CAN.G14.23 Capsicum annuum HOM05D000036 ORTHO05D000441 2.2e-06 56.6 127 29.1
PGSC0003DMG400027840 Solanum tuberosum HOM05D000036 ORTHO05D000441 2.2e-06 56.6 127 29.9
AL8G28080 Arabidopsis lyrata HOM05D000036 ORTHO05D000095 2.9e-06 56.2 127 29.9
BcaC05g26248 Brassica carinata HOM05D008070 ORTHO05D001888 2.9e-06 56.2 135 28.9
C05p22620 Brassica napus HOM05D008070 ORTHO05D001888 2.9e-06 56.2 135 28.9
BolC5t30961H Brassica oleracea HOM05D008070 ORTHO05D001888 2.9e-06 56.2 135 28.9
Nitab4.5_0003767g0060 Nicotiana tabacum HOM05D000036 ORTHO05D000441 2.9e-06 56.2 158 28.5
Aa31LG4G10410 Aethionema arabicum HOM05D008070 ORTHO05D001888 3.8e-06 55.8 168 29.2
AT5G53370 Arabidopsis thaliana HOM05D000036 ORTHO05D000095 3.8e-06 55.8 123 30.9
BcaC03g16868 Brassica carinata HOM05D001445 ORTHO05D001261 3.8e-06 55.8 72 40.3
A08p28210 Brassica napus HOM05D008070 ORTHO05D001888 3.8e-06 55.8 180 26.1
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 3.8e-06 55.8 132 29.5
BraA08t34752Z Brassica rapa HOM05D008070 ORTHO05D001888 3.8e-06 55.8 180 26.1
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 3.8e-06 55.8 143 26.6
BraA02t06717Z Brassica rapa HOM05D008070 ORTHO05D001888 5.0e-06 55.5 166 27.1
BraA09t39622Z Brassica rapa HOM05D008070 ORTHO05D001888 5.0e-06 55.5 140 30.0
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 5.0e-06 55.5 140 28.6
CDE02G2547 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 5.0e-06 55.5 155 28.4
THA.LOC104822979 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 5.0e-06 55.5 155 27.7
Carub.0003s0617 Capsella rubella HOM05D005742 ORTHO05D001888 6.5e-06 55.1 146 26.7
BcaB07g32331 Brassica carinata HOM05D008070 ORTHO05D001888 8.5e-06 54.7 135 28.1
A02p30180 Brassica napus HOM05D001445 ORTHO05D001261 8.5e-06 54.7 72 40.3
BraA02t08034Z Brassica rapa HOM05D001445 ORTHO05D001261 8.5e-06 54.7 72 40.3
BraA07t29145Z Brassica rapa HOM05D008070 ORTHO05D001888 8.5e-06 54.7 164 27.4
Sp1g20800 Schrenkiella parvula HOM05D008070 ORTHO05D001888 8.5e-06 54.7 164 26.2
PGSC0003DMG400039958 Solanum tuberosum HOM05D000036 ORTHO05D000441 8.5e-06 54.7 158 26.6


User provided reference genes

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