Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3984 Papaver somniferum HOM05D001907 ORTHO05D301980 7.3e-62 240.4 119 100.0
PSO478G4870 Papaver somniferum HOM05D000003 ORTHO05D006738 2.9e-10 68.9 83 43.4
Solyc03g007170.3 Solanum lycopersicum HOM05D001907 ORTHO05D002387 1.4e-09 66.6 85 42.4
Sopen03g003150 Solanum pennellii HOM05D001907 ORTHO05D002387 1.4e-09 66.6 85 42.4
PSO478G4506 Papaver somniferum HOM05D001907 ORTHO05D002387 2.5e-09 65.9 85 42.4
Nn4g26408 Nelumbo nucifera HOM05D001907 ORTHO05D002387 5.5e-09 64.7 84 39.3
MSTRG.8803 Avicennia marina HOM05D001907 ORTHO05D002387 2.7e-08 62.4 84 39.3
Rhsim11G0052300 Rhododendron simsii HOM05D001907 ORTHO05D002387 2.7e-08 62.4 84 38.1
PGSC0003DMG400031007 Solanum tuberosum HOM05D001907 ORTHO05D002387 3.6e-08 62.0 84 39.3
TAR374G0814 Trochodendron aralioides HOM05D001907 ORTHO05D002387 3.6e-08 62.0 84 38.1
Lj1A984T84 Lonicera japonica HOM05D001907 ORTHO05D002387 4.7e-08 61.6 84 38.1
MBI12_g10759_MAGBIO Magnolia biondii HOM05D001907 ORTHO05D002387 4.7e-08 61.6 84 32.1
Nitab4.5_0000072g0450 Nicotiana tabacum HOM05D001907 ORTHO05D002387 4.7e-08 61.6 84 38.1
MBI03_g16542_MAGBIO Magnolia biondii HOM05D001907 ORTHO05D002387 7.9e-08 60.8 84 36.9
Nitab4.5_0007960g0020 Nicotiana tabacum HOM05D001907 ORTHO05D002387 7.9e-08 60.8 84 38.1
TAR629G1911 Trochodendron aralioides HOM05D001907 ORTHO05D002387 7.9e-08 60.8 85 37.6
TAR636G0269 Trochodendron aralioides HOM05D001907 ORTHO05D002387 1.8e-07 59.7 84 35.7
PSO478G0067 Papaver somniferum HOM05D001907 ORTHO05D011097 2.3e-07 59.3 83 38.6
vmacro06769 Vaccinium macrocarpon HOM05D001907 ORTHO05D002387 3.9e-07 58.5 84 36.9
CSS0043271 Camellia sinensis var. sinensis HOM05D001907 ORTHO05D002387 6.7e-07 57.8 84 38.1
DCAR_020207 Daucus carota HOM05D001907 ORTHO05D002387 6.7e-07 57.8 84 33.3
EL10Ac3g05795 Beta vulgaris HOM05D001907 ORTHO05D002387 8.8e-07 57.4 84 34.5
CAN.G128.121 Capsicum annuum HOM05D001907 ORTHO05D015557 8.8e-07 57.4 90 33.3
PSO478G2304 Papaver somniferum HOM05D001907 ORTHO05D002387 8.8e-07 57.4 85 36.5
AT3G12340 Arabidopsis thaliana HOM05D001907 ORTHO05D002387 1.1e-06 57.0 86 39.5
Rhsim03G0171200 Rhododendron simsii HOM05D001907 ORTHO05D002387 1.1e-06 57.0 85 38.8
Psat7g226200 Pisum sativum HOM05D001907 ORTHO05D002387 1.5e-06 56.6 86 36.0
PSO782G5711 Papaver somniferum HOM05D001907 ORTHO05D002387 2.0e-06 56.2 85 38.8
Ca_19708_v3 Cicer arietinum L. HOM05D001907 ORTHO05D002387 2.6e-06 55.8 86 37.2
Dinv43711 Davidia involucrata HOM05D001907 ORTHO05D002387 2.6e-06 55.8 84 36.9
PSO478G3343 Papaver somniferum HOM05D001907 ORTHO05D002387 2.6e-06 55.8 105 34.3
AL3G23980 Arabidopsis lyrata HOM05D001907 ORTHO05D002387 3.3e-06 55.5 86 39.5
Sc07g0002120 Simmondsia chinensis HOM05D001907 ORTHO05D002387 4.4e-06 55.1 82 37.8
MD00G1063900 Malus domestica HOM05D001907 ORTHO05D002387 5.7e-06 54.7 82 35.4
Manes.02G213700 Manihot esculenta HOM05D001907 ORTHO05D002387 5.7e-06 54.7 84 40.5
QL12p039655 Quercus lobata HOM05D001907 ORTHO05D002387 5.7e-06 54.7 84 34.5
PSO782G4094 Papaver somniferum HOM05D001907 ORTHO05D002387 7.4e-06 54.3 85 35.3
Dinv32376 Davidia involucrata HOM05D001907 ORTHO05D002387 9.7e-06 53.9 84 34.5
Medtr4g032680 Medicago truncatula HOM05D001907 ORTHO05D002387 9.7e-06 53.9 83 37.3
RcHm_v2.0_Chr1g0350561 Rosa chinensis HOM05D001907 ORTHO05D002387 9.7e-06 53.9 84 33.3


User provided reference genes

Program Settings