Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 0.0e+00 1423.3 798 100.0
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 0.0e+00 1337.8 799 95.5
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 0.0e+00 1234.9 807 85.3
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 0.0e+00 1219.9 804 85.2
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 9.9e-280 966.8 832 68.6
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 8.4e-279 963.8 832 69.0
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 4.8e-274 948.0 841 66.2
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 7.1e-270 934.1 878 61.4
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 5.1e-268 927.9 834 63.4
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 1.6e-266 922.9 827 63.5
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 5.3e-265 917.9 844 63.9
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 1.1e-259 900.2 796 63.8
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 5.7e-259 897.9 771 67.7
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 1.3e-258 896.7 835 62.4
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 2.4e-257 892.5 832 64.9
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 2.0e-256 889.4 835 60.5
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 4.5e-256 888.3 837 60.6
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 5.9e-256 887.9 837 60.5
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 8.5e-255 884.0 829 62.5
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 4.2e-254 881.7 838 63.7
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.6e-253 879.8 822 64.2
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 2.1e-253 879.4 854 60.3
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 6.1e-253 877.9 829 61.5
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 3.0e-252 875.5 829 61.5
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 5.1e-252 874.8 820 61.2
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 2.2e-250 869.4 839 61.6
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 2.2e-250 869.4 835 60.6
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 8.2e-250 867.5 857 58.2
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 3.1e-249 865.5 860 58.3
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 3.1e-249 865.5 830 61.1
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 4.5e-248 861.7 848 61.6
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 1.3e-247 860.1 840 60.7
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 6.5e-247 857.8 808 62.5
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.4e-246 856.7 821 64.8
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 2.5e-246 855.9 809 62.3
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 7.2e-246 854.4 838 62.6
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 7.2e-246 854.4 845 61.1
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 9.4e-246 854.0 849 57.2
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 3.6e-245 852.0 857 59.6
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 6.7e-244 847.8 850 60.7
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 6.3e-242 841.3 818 59.7
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 8.2e-242 840.9 801 64.2
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.4e-241 840.1 828 60.7
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 4.1e-241 838.6 826 56.5
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 9.1e-241 837.4 829 59.7
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 1.2e-240 837.0 802 58.5
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 3.4e-240 835.5 827 57.8
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.0e-239 833.9 825 58.7
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 2.9e-239 832.4 810 59.1
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 3.8e-239 832.0 838 57.5
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 5.0e-239 831.6 809 60.1
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 6.5e-239 831.2 817 58.5
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 1.9e-238 829.7 844 59.4
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 9.4e-238 827.4 838 58.6
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 1.6e-237 826.6 833 57.3
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 6.1e-237 824.7 846 56.7
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 1.4e-236 823.5 824 61.3
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 2.3e-236 822.8 829 56.3
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 1.5e-235 820.1 830 59.3
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 9.7e-235 817.4 826 58.6
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 2.8e-234 815.8 830 57.1
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 9.1e-233 810.8 795 58.2
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 2.0e-232 809.7 823 60.4
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 7.7e-232 807.7 797 61.5
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 1.3e-231 807.0 825 57.3
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 1.1e-230 803.9 837 57.6
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 3.2e-230 802.4 827 57.1
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 2.7e-229 799.3 833 58.5
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 3.6e-229 798.9 810 59.3
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 4.7e-229 798.5 798 60.4
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 8.0e-229 797.7 868 55.9
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.5e-227 793.5 792 57.8
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 5.7e-227 791.6 814 60.9
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 2.4e-225 786.2 822 56.6
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 2.9e-223 779.2 809 57.6
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 1.1e-222 777.3 768 59.1
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.9e-222 776.5 896 54.8
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 2.7e-221 772.7 830 56.5
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 4.7e-221 771.9 802 57.2
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 6.3e-218 761.5 816 55.5
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 2.0e-216 756.5 842 55.3
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 2.7e-216 756.1 830 55.7
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.5e-216 755.7 826 53.4
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 4.1e-209 732.3 757 55.9
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 1.2e-205 720.7 669 64.7
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 3.6e-205 719.2 790 55.9
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.5e-203 713.8 830 55.4
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.3e-199 700.7 811 50.7
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 6.6e-199 698.4 803 52.6
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 8.6e-199 698.0 825 53.8
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 8.6e-199 698.0 701 59.5
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 3.6e-197 692.6 827 54.1
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.1e-196 691.0 831 54.8
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 8.9e-196 688.0 833 54.9
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 2.0e-195 686.8 828 55.3
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 2.9e-194 682.9 833 54.6
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 4.3e-190 669.1 830 54.0
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 9.9e-187 657.9 825 53.5
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 4.1e-185 652.5 826 52.3
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 5.4e-185 652.1 831 51.6
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 7.1e-185 651.7 817 53.2
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 5.8e-179 632.1 839 46.8
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 7.6e-179 631.7 809 50.7
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 1.7e-178 630.6 816 48.3
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.4e-177 627.5 785 47.9
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 4.2e-177 625.9 919 43.7
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 2.3e-175 620.2 785 47.4
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 3.9e-175 619.4 785 47.6
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.3e-170 604.4 820 46.2
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 5.4e-169 599.0 453 68.4
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 1.1e-164 584.7 601 64.6
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 2.4e-161 573.5 733 50.5
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 9.3e-153 545.0 737 49.5
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 4.0e-148 529.6 714 46.8
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 1.5e-147 527.7 663 54.1
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 2.0e-139 500.7 738 45.5
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.4e-135 488.0 482 58.5
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 4.8e-133 479.6 467 68.7
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 5.0e-130 469.5 892 42.2
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 1.6e-128 464.5 556 57.4
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 5.1e-127 459.5 316 75.0
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.6e-123 447.2 858 39.7
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 7.7e-123 445.7 537 53.6
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 2.7e-120 437.2 540 58.3
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 2.1e-112 411.0 348 61.8
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 9.1e-108 395.6 422 59.7
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 3.8e-98 363.6 824 37.9
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 2.5e-97 360.9 774 37.1
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 6.8e-95 352.8 455 46.2
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 9.8e-94 349.0 565 42.5
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.4e-92 345.1 276 64.1
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 4.3e-89 333.6 549 38.4
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 2.8e-88 330.9 907 33.2
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.2e-86 325.5 536 42.5
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 7.8e-83 312.8 460 43.5
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 2.2e-61 241.5 783 30.0
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 3.3e-57 227.6 355 52.7
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.8e-56 224.6 207 63.3
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 3.6e-48 197.6 389 46.8
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 2.4e-47 194.9 172 62.8
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.0e-47 194.1 387 39.0
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.7e-35 154.8 307 40.4
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.9e-35 153.3 328 37.5
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 3.7e-32 144.4 145 48.3
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 1.1e-31 142.9 132 62.9
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 1.8e-31 142.1 134 53.0
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 3.3e-25 121.3 129 51.9
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.2e-24 116.7 127 53.5
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 5.9e-22 110.5 102 58.8
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.0e-21 107.5 128 53.1
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.9e-20 105.5 81 63.0
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.2e-20 104.8 275 32.7
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.1e-19 102.1 77 64.9
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.0e-18 99.8 272 37.1
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 1.4e-18 99.4 94 54.3
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.7e-18 97.1 324 30.9
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.1e-17 96.3 105 56.2
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 2.2e-16 92.0 96 50.0
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.7e-16 91.3 236 35.2
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 6.3e-16 90.5 82 61.0
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.8e-15 89.0 98 54.1
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.8e-15 89.0 69 63.8
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.9e-13 81.6 155 37.4
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.8e-13 81.3 320 29.4
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 5.0e-13 80.9 112 48.2
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 8.5e-13 80.1 70 64.3
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.2e-12 78.2 80 51.2
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 7.2e-12 77.0 82 50.0
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 9.4e-12 76.6 65 58.5
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.7e-11 75.1 62 62.9
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 6.1e-11 73.9 51 70.6
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 1.4e-10 72.8 63 66.7
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.8e-10 72.4 147 40.1
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 3.0e-10 71.6 54 68.5
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 1.1e-07 63.2 41 73.2
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 7.0e-07 60.5 55 54.5
HPP92_028489 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.5e-06 59.3 54 59.3
HPP92_006873 Vanilla planifolia HOM05D000450 ORTHO05D002608 2.0e-06 58.9 110 41.8
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 3.5e-06 58.2 71 52.1
HPP92_028506 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.9e-06 57.4 36 77.8
HPP92_028374 Vanilla planifolia HOM05D003551 ORTHO05D016818 7.7e-06 57.0 101 39.6


User provided reference genes

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