Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3864 Papaver somniferum HOM05D004118 ORTHO05D004686 0.0e+00 1193.3 747 100.0
PSO017G1325 Papaver somniferum HOM05D004118 ORTHO05D004686 4.6e-311 1070.8 776 89.0
PSO675G0887 Papaver somniferum HOM05D004118 ORTHO05D004686 3.8e-180 636.0 782 57.3
PSO541G0755 Papaver somniferum HOM05D004118 ORTHO05D004686 1.1e-176 624.4 781 60.4
Manes.15G090200 Manihot esculenta HOM05D004118 ORTHO05D004686 1.7e-95 354.8 782 39.4
Nn1g04275 Nelumbo nucifera HOM05D004118 ORTHO05D004686 2.9e-92 344.0 798 41.6
TAR627G0391 Trochodendron aralioides HOM05D004118 ORTHO05D004686 3.9e-92 343.6 810 41.7
Aqoxy1G02262 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 7.3e-91 339.3 805 40.7
Cpa.g.sc80.12 Carica papaya HOM05D004118 ORTHO05D004686 1.2e-90 338.6 854 38.9
CiPaw.11G166400 Carya illinoinensis HOM05D004118 ORTHO05D004686 1.6e-90 338.2 851 36.7
QL08p023555 Quercus lobata HOM05D004118 ORTHO05D004686 3.6e-90 337.0 824 37.0
Potri.011G097700 Populus trichocarpa HOM05D004118 ORTHO05D004686 1.5e-88 331.6 818 39.2
Sabra11G0091500 Salix brachista HOM05D004118 ORTHO05D004686 3.0e-84 317.4 796 38.3
PGR083G2344 Punica granatum HOM05D004118 ORTHO05D004686 6.6e-84 316.2 791 36.2
FvH4_3g19150 Fragaria vesca HOM05D004118 ORTHO05D004686 5.6e-83 313.2 837 36.3
Nitab4.5_0011677g0020 Nicotiana tabacum HOM05D004118 ORTHO05D004686 3.6e-82 310.5 801 37.2
Manes.03G104700 Manihot esculenta HOM05D004118 ORTHO05D004686 8.0e-82 309.3 784 38.0
FAN25G0990 Fragaria x ananassa HOM05D004118 ORTHO05D004686 1.4e-81 308.5 832 37.7
FAN11G3070 Fragaria x ananassa HOM05D004118 ORTHO05D004686 2.3e-81 307.8 809 37.0
Sabra11G0090500 Salix brachista HOM05D004118 ORTHO05D004686 2.3e-81 307.8 806 35.7
Solyc07g062730.1 Solanum lycopersicum HOM05D004118 ORTHO05D004686 2.3e-81 307.8 823 36.2
CSS0010936 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 6.8e-81 306.2 803 38.1
CiPaw.12G116800 Carya illinoinensis HOM05D004118 ORTHO05D004686 6.8e-81 306.2 824 39.8
MSTRG.6813 Avicennia marina HOM05D004118 ORTHO05D004686 8.9e-81 305.8 819 36.1
Nitab4.5_0000246g0070 Nicotiana tabacum HOM05D004118 ORTHO05D004686 1.2e-80 305.4 805 36.3
PSO675G3813 Papaver somniferum HOM05D004118 ORTHO05D004686 2.6e-80 304.3 352 56.8
DCAR_021002 Daucus carota HOM05D004118 ORTHO05D004686 4.4e-80 303.5 829 35.5
MD03G1236100 Malus domestica HOM05D004118 ORTHO05D004686 5.8e-80 303.1 822 37.0
Prupe.4G173200 Prunus persica HOM05D004118 ORTHO05D004686 9.8e-80 302.4 833 35.8
Haze_09381 Corylus avellana HOM05D004118 ORTHO05D004686 4.1e-78 297.0 813 36.7
Medtr2g078530 Medicago truncatula HOM05D004118 ORTHO05D004686 7.1e-78 296.2 802 38.8
FAN16G2866 Fragaria x ananassa HOM05D004118 ORTHO05D004686 9.2e-78 295.8 828 39.0
Sopen07g030960 Solanum pennellii HOM05D004118 ORTHO05D004686 1.2e-77 295.4 811 35.6
Cfa020624 Carpinus fangiana HOM05D004118 ORTHO05D004686 1.6e-77 295.0 836 37.8
Duzib213G0890 Durio zibethinus HOM05D004118 ORTHO05D004686 2.7e-77 294.3 791 37.5
VMungo1080G0043 Vigna mungo HOM05D004118 ORTHO05D004686 3.5e-77 293.9 812 40.8
TWI39G0897 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 1.7e-76 291.6 809 36.7
PGSC0003DMG400012399 Solanum tuberosum HOM05D004118 ORTHO05D004686 3.0e-76 290.8 824 35.6
Ciclev10007570m.g Citrus clementina HOM05D004118 ORTHO05D004686 6.6e-76 289.7 791 39.2
Thecc.07G100000 Theobroma cacao HOM05D004118 ORTHO05D004686 6.6e-76 289.7 814 37.0
Glyma.13G273000 Glycine max HOM05D004118 ORTHO05D004686 1.1e-75 288.9 829 38.7
FAN21G0508 Fragaria x ananassa HOM05D004118 ORTHO05D004686 5.6e-75 286.6 819 34.6
Actinidia07500 Actinidia chinensis HOM05D004118 ORTHO05D004686 1.2e-74 285.4 758 37.2
Potri.001G373100 Populus trichocarpa HOM05D004118 ORTHO05D004686 2.8e-74 284.3 795 34.5
RcHm_v2.0_Chr5g0032241 Rosa chinensis HOM05D004118 ORTHO05D004686 6.2e-74 283.1 813 35.5
CAN.G162.27 Capsicum annuum HOM05D004118 ORTHO05D004686 8.1e-74 282.7 791 34.9
Gohir.A13G147400 Gossypium hirsutum HOM05D004118 ORTHO05D004686 8.1e-74 282.7 840 35.5
Eucgr.F01179 Eucalyptus grandis HOM05D004118 ORTHO05D004686 1.1e-73 282.3 820 33.8
Dinv20215 Davidia involucrata HOM05D004118 ORTHO05D004686 2.3e-73 281.2 762 37.7
Lalb_Chr20g0109451 Lupinus albus HOM05D004118 ORTHO05D004686 2.3e-73 281.2 776 35.2
Phvul.005G069300 Phaseolus vulgaris HOM05D004118 ORTHO05D004686 2.3e-73 281.2 804 37.1
MD11G1256900 Malus domestica HOM05D004118 ORTHO05D004686 5.2e-73 280.0 851 35.0
Sabra16G0245500 Salix brachista HOM05D004118 ORTHO05D004686 2.0e-72 278.1 761 34.6
Gohir.D13G152264 Gossypium hirsutum HOM05D004118 ORTHO05D004686 8.3e-71 272.7 781 35.7
Gorai.002G066200 Gossypium raimondii HOM05D004118 ORTHO05D004686 4.3e-67 260.4 613 40.3
MSTRG.15246 Avicennia marina HOM05D004118 ORTHO05D004686 5.6e-67 260.0 768 33.1
Psat5g241400 Pisum sativum HOM05D004118 ORTHO05D004686 1.2e-66 258.8 818 33.5
MBI07_g32544_MAGBIO Magnolia biondii HOM05D004118 ORTHO05D004686 6.2e-66 256.5 842 37.6
Sc16g0007320 Simmondsia chinensis HOM05D004118 ORTHO05D004686 6.2e-66 256.5 825 33.6
CSS0009782 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 3.1e-65 254.2 719 36.6
SGA_v2.0_scaffold73G24222 Striga asiatica HOM05D004118 ORTHO05D004686 4.0e-65 253.8 826 35.2
TWI38G2280 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 4.0e-65 253.8 782 34.1
PGSC0003DMG400015371 Solanum tuberosum HOM05D004118 ORTHO05D004686 8.9e-65 252.7 729 34.3
Peaxi162Scf00069g00197 Petunia axillaris HOM05D004118 ORTHO05D004686 1.2e-64 252.3 771 37.9
Cc05_g11580 Coffea canephora HOM05D004118 ORTHO05D004686 2.6e-64 251.1 888 36.6
Actinidia35234 Actinidia chinensis HOM05D004118 ORTHO05D001556 4.4e-64 250.4 748 35.3
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 5.8e-64 250.0 787 34.4
MSTRG.12889 Avicennia marina HOM05D004118 ORTHO05D004686 5.8e-64 250.0 761 34.0
Gorai.013G171900 Gossypium raimondii HOM05D004118 ORTHO05D004686 5.8e-64 250.0 807 33.8
HanXRQChr03g0070941 Helianthus annuus HOM05D004118 ORTHO05D004686 7.6e-64 249.6 765 36.2
Peaxi162Scf00000g00285 Petunia axillaris HOM05D004118 ORTHO05D004686 9.9e-64 249.2 728 33.7
vmacro11898 Vaccinium macrocarpon HOM05D004118 ORTHO05D004686 9.9e-64 249.2 783 36.7
Lsat_1_v5_gn_9_98421 Lactuca sativa HOM05D004118 ORTHO05D004686 1.3e-63 248.8 769 39.1
Lj3g0023579 Lotus japonicus HOM05D004118 ORTHO05D004686 2.9e-63 247.7 801 39.7
Nitab4.5_0003033g0050 Nicotiana tabacum HOM05D004118 ORTHO05D004686 2.9e-63 247.7 805 35.2
Dinv14950 Davidia involucrata HOM05D004118 ORTHO05D004686 4.9e-63 246.9 596 38.1
SalBow8G5405 Salvia bowleyana HOM05D004118 ORTHO05D004686 6.4e-63 246.5 770 34.5
Rhsim04G0023200 Rhododendron simsii HOM05D004118 ORTHO05D004686 4.2e-62 243.8 763 37.5
Gohir.D01G046700 Gossypium hirsutum HOM05D004118 ORTHO05D004686 9.3e-62 242.7 734 34.6
MELO3C019394.2 Cucumis melo HOM05D004118 ORTHO05D004686 6.0e-61 240.0 853 35.8
CsaV3_3G019580 Cucumis sativus L. HOM05D004118 ORTHO05D004686 1.7e-60 238.4 860 33.0
Sopen12g005780 Solanum pennellii HOM05D004118 ORTHO05D004686 1.7e-60 238.4 739 33.6
Glyma.12G227300 Glycine max HOM05D004118 ORTHO05D004686 1.1e-59 235.7 812 34.6
Migut.M00768 Erythranthe guttata HOM05D004118 ORTHO05D004686 1.5e-59 235.3 827 35.4
Nitab4.5_0000332g0190 Nicotiana tabacum HOM05D004118 ORTHO05D004686 4.3e-59 233.8 785 34.0
TPR.G17554 Trifolium pratense HOM05D004118 ORTHO05D004686 5.6e-59 233.4 813 34.3
THA.LOC104810455 Tarenaya hassleriana HOM05D004118 ORTHO05D004686 7.3e-59 233.0 782 35.2
Lj8C153G19 Lonicera japonica HOM05D004118 ORTHO05D004686 2.1e-58 231.5 741 32.9
Aa31LG8G2310 Aethionema arabicum HOM05D004118 ORTHO05D004686 3.6e-58 230.7 761 33.1
Oeu019296.1 Olea europaea HOM05D004118 ORTHO05D004686 6.2e-58 229.9 785 34.9
CSS0030924 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 1.5e-56 225.3 732 35.0
ECA236G3195 Erigeron canadensis HOM05D004118 ORTHO05D004686 2.6e-56 224.6 734 32.0
Duzib170G0047 Durio zibethinus HOM05D004118 ORTHO05D004686 2.2e-55 221.5 759 35.2
CANSAT35G0858 Cannabis sativa HOM05D004118 ORTHO05D004686 1.1e-54 219.2 827 34.2
Lalb_Chr25g0286181 Lupinus albus HOM05D004118 ORTHO05D004686 2.4e-54 218.0 625 34.9
Rhsim06G0203400 Rhododendron simsii HOM05D004118 ORTHO05D004686 4.2e-54 217.2 773 33.4
Hma1.2p1_0313F.1_g121640 Hydrangea macrophylla HOM05D004118 ORTHO05D004686 5.4e-54 216.9 624 38.3
Sp3g13300 Schrenkiella parvula HOM05D004118 ORTHO05D004686 7.1e-54 216.5 790 32.7
Thhalv10020211m.g Eutrema salsugineum HOM05D004118 ORTHO05D004686 2.1e-53 214.9 774 31.5
ECA240G2123 Erigeron canadensis HOM05D004118 ORTHO05D004686 6.0e-53 213.4 775 31.1
Aqoxy4G00578 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 1.7e-52 211.8 811 33.9
DCAR_019575 Daucus carota HOM05D004118 ORTHO05D004686 3.3e-51 207.6 754 32.1
Sed0017211 Sechium edule HOM05D004118 ORTHO05D004686 2.1e-50 204.9 805 33.5
Ah.06g194460 Amaranthus hybridus HOM05D004118 ORTHO05D004686 3.1e-49 201.1 778 33.7
arahy.Tifrunner.gnm1.ann1.YMW7LF Arachis hypogaea HOM05D004118 ORTHO05D004686 9.0e-49 199.5 751 32.6
Sed0016267 Sechium edule HOM05D004118 ORTHO05D004686 9.9e-48 196.1 724 34.3
Lsat_1_v5_gn_7_103661 Lactuca sativa HOM05D004118 ORTHO05D004686 8.4e-47 193.0 735 32.1
EL10Ac4g08266 Beta vulgaris HOM05D004118 ORTHO05D004686 3.2e-46 191.0 838 34.2
AL3G27450 Arabidopsis lyrata HOM05D004118 ORTHO05D004686 5.4e-46 190.3 770 34.8
Lsat_1_v5_gn_5_128820 Lactuca sativa HOM05D004118 ORTHO05D004686 4.6e-45 187.2 746 31.5
unitig_37.g12565 Utricularia gibba HOM05D004118 ORTHO05D004686 4.6e-45 187.2 737 31.8
unitig_747.g21581 Utricularia gibba HOM05D004118 ORTHO05D004686 5.1e-44 183.7 804 32.6
CARHR090060 Cardamine hirsuta HOM05D004118 ORTHO05D004686 8.7e-44 183.0 756 33.9
BcaB04g20948 Brassica carinata HOM05D004118 ORTHO05D004686 2.0e-40 171.8 722 29.5
ECA234G1224 Erigeron canadensis HOM05D004118 ORTHO05D004686 4.9e-39 167.2 757 29.9
Oeu025351.1 Olea europaea HOM05D004118 ORTHO05D004686 6.5e-39 166.8 745 33.0
Lalb_Chr01g0006651 Lupinus albus HOM05D004118 ORTHO05D004686 8.4e-39 166.4 737 30.9
arahy.Tifrunner.gnm1.ann1.82B0EJ Arachis hypogaea HOM05D004118 ORTHO05D004686 9.3e-38 162.9 650 31.1
AUR62036141 Chenopodium quinoa HOM05D004118 ORTHO05D004686 6.0e-37 160.2 773 32.1
C05p52120 Brassica napus HOM05D004118 ORTHO05D004686 3.9e-36 157.5 758 34.3
BolC5t33897H Brassica oleracea HOM05D004118 ORTHO05D004686 3.9e-36 157.5 758 34.3
HanXRQChr10g0302481 Helianthus annuus HOM05D004118 ORTHO05D004686 5.1e-36 157.1 755 31.9
BcaB06g29535 Brassica carinata HOM05D004118 ORTHO05D004686 6.7e-36 156.8 758 32.8
A05p34340 Brassica napus HOM05D004118 ORTHO05D004686 3.3e-35 154.5 778 31.2
Gohir.A08G021600 Gossypium hirsutum HOM05D004118 ORTHO05D004686 2.1e-34 151.8 751 29.0
HPP92_002942 Vanilla planifolia HOM05D004118 ORTHO05D004686 4.8e-34 150.6 823 29.4
BraA05t22255Z Brassica rapa HOM05D004118 ORTHO05D004686 8.2e-34 149.8 775 32.0
Gohir.D08G032400 Gossypium hirsutum HOM05D004118 ORTHO05D004686 5.8e-32 143.7 748 27.9
Zm00001eb014970 Zea mays HOM05D004118 ORTHO05D004686 1.0e-31 142.9 898 27.7
Gorai.004G029800 Gossypium raimondii HOM05D004118 ORTHO05D004686 6.5e-31 140.2 750 28.3
Zm00001eb395950 Zea mays HOM05D004118 ORTHO05D004686 6.5e-31 140.2 888 28.4
SGA_v2.0_scaffold70G23697 Striga asiatica HOM05D004118 ORTHO05D004686 5.5e-30 137.1 667 28.6
Ah.04g162010 Amaranthus hybridus HOM05D004118 ORTHO05D004686 7.1e-30 136.7 764 29.3
HPP92_003871 Vanilla planifolia HOM05D004118 ORTHO05D004686 1.6e-29 135.6 794 27.8
DCAR_017117 Daucus carota HOM05D004118 ORTHO05D004686 2.3e-28 131.7 768 27.0
Atru.chr2.2380 Acer truncatum HOM05D004118 ORTHO05D004686 3.9e-28 131.0 258 36.8
Nn1g06377 Nelumbo nucifera HOM05D004118 ORTHO05D004686 1.5e-27 129.0 301 49.5
GSVIVG01014262001 Vitis vinifera HOM05D004118 ORTHO05D003395 2.5e-27 128.3 578 31.1
Actinidia14383 Actinidia chinensis HOM05D004118 ORTHO05D004686 8.2e-26 123.2 348 34.5
HPP92_003895 Vanilla planifolia HOM05D004118 ORTHO05D004686 1.4e-25 122.5 363 35.0
BcaC09g48474 Brassica carinata HOM05D004118 ORTHO05D004686 3.1e-25 121.3 558 29.7
BolC1t04899H Brassica oleracea HOM05D004118 ORTHO05D004686 1.5e-24 119.0 561 29.8
C01p49420 Brassica napus HOM05D004118 ORTHO05D004686 2.6e-24 118.2 561 29.6
HanXRQChr15g0494281 Helianthus annuus HOM05D004118 ORTHO05D004686 2.6e-24 118.2 338 34.0
THA.LOC104798758 Tarenaya hassleriana HOM05D004118 ORTHO05D004686 1.0e-23 116.3 517 33.7
Gohir.A01G060200 Gossypium hirsutum HOM05D004118 ORTHO05D004686 2.9e-23 114.8 506 31.0
Os06g0352900 Oryza sativa ssp. japonica HOM05D004118 ORTHO05D004686 5.0e-23 114.0 881 25.2
Solyc12g014040.1 Solanum lycopersicum HOM05D004118 ORTHO05D004686 2.5e-22 111.7 228 37.3
SEGI_08873 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 1.0e-20 106.3 721 26.9
AT3G15095 Arabidopsis thaliana HOM05D004118 ORTHO05D004686 6.7e-20 103.6 473 35.3
SGA_v2.0_scaffold130G34343 Striga asiatica HOM05D004118 ORTHO05D004686 2.0e-19 102.1 703 26.9
Lalb_Chr19g0134031 Lupinus albus HOM05D004118 ORTHO05D004686 1.1e-17 96.3 560 28.2
CDE10G0292 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 4.1e-17 94.4 468 28.8
Atru.chr2.2381 Acer truncatum HOM05D004118 ORTHO05D004686 9.1e-17 93.2 201 36.3
Lsat_1_v5_gn_4_172920 Lactuca sativa HOM05D004118 ORTHO05D004686 1.5e-16 92.4 210 40.5
HanXRQChr12g0372791 Helianthus annuus HOM05D004118 ORTHO05D004686 3.4e-16 91.3 215 38.6
Cc04_g12070 Coffea canephora HOM05D004118 ORTHO05D004686 5.9e-16 90.5 189 36.5
Lsat_1_v5_gn_1_36460 Lactuca sativa HOM05D004118 ORTHO05D004686 8.5e-15 86.7 156 47.4
SEGI_02629 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 1.1e-14 86.3 371 27.8
Lj1P837T15 Lonicera japonica HOM05D004118 ORTHO05D004686 7.2e-14 83.6 108 55.6
Actinidia33372 Actinidia chinensis HOM05D004118 ORTHO05D004686 4.7e-13 80.9 121 52.1
Lalb_Chr03g0030811 Lupinus albus HOM05D004118 ORTHO05D004686 6.1e-13 80.5 570 27.9
HPP92_003896 Vanilla planifolia HOM05D004118 ORTHO05D004686 1.0e-12 79.7 244 29.1
TPR.G17527 Trifolium pratense HOM05D004118 ORTHO05D004686 1.4e-12 79.3 51 72.5
AUR62019494 Chenopodium quinoa HOM05D004118 ORTHO05D004686 1.8e-12 79.0 499 32.3
Cfa006262 Carpinus fangiana HOM05D000001 ORTHO05D000003 2.0e-11 75.5 86 43.0
CAN.G329.5 Capsicum annuum HOM05D004118 ORTHO05D004686 7.4e-11 73.6 366 27.3
CDE02G0061 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 8.2e-10 70.1 77 45.5
CDE10G0599 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 1.8e-09 68.9 251 29.9
PGR004G1454 Punica granatum HOM05D004499 ORTHO05D004928 6.5e-07 60.5 311 29.6
Aqoxy4G03228 Aquilegia oxysepala HOM05D004499 ORTHO05D004928 2.5e-06 58.5 274 27.0
ECA233G0353 Erigeron canadensis HOM05D004499 ORTHO05D004928 3.2e-06 58.2 85 43.5


User provided reference genes

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