Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 4.5e-175 617.8 315 100.0
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 3.2e-165 585.1 319 95.3
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 2.8e-60 236.5 294 45.2
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 8.1e-60 235.0 313 45.0
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.9e-53 213.8 248 46.0
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.5e-50 204.1 253 44.3
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 2.5e-48 196.8 253 44.3
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 1.6e-47 194.1 260 41.9
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 7.9e-47 191.8 269 42.8
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.3e-46 191.0 290 42.1
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.3e-46 191.0 290 42.1
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 1.3e-46 191.0 255 42.7
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 1.3e-46 191.0 265 44.9
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 5.1e-46 189.1 288 41.7
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 6.7e-46 188.7 266 41.4
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 8.7e-46 188.3 276 43.5
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 1.5e-45 187.6 258 41.1
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 3.3e-45 186.4 273 41.0
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 3.3e-45 186.4 267 42.7
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 9.7e-45 184.9 290 41.0
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 8.2e-44 181.8 264 42.4
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 1.1e-43 181.4 272 38.2
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 1.4e-43 181.0 253 43.5
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 1.4e-43 181.0 169 52.7
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 6.9e-43 178.7 264 40.2
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 9.0e-43 178.3 256 41.4
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 2.0e-42 177.2 282 37.9
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 3.4e-42 176.4 273 41.8
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 3.4e-42 176.4 255 39.6
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 5.9e-42 175.6 276 41.3
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 1.3e-41 174.5 261 40.2
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 5.0e-41 172.6 255 39.2
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 6.5e-41 172.2 257 40.9
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 8.5e-41 171.8 265 39.2
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.1e-40 171.4 172 51.2
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 1.9e-40 170.6 169 47.9
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 3.2e-40 169.9 149 51.7
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 4.2e-40 169.5 145 51.7
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 4.2e-40 169.5 145 51.7
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 5.5e-40 169.1 258 38.4
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 5.5e-40 169.1 258 38.4
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 5.5e-40 169.1 144 52.8
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 7.2e-40 168.7 190 46.3
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 7.2e-40 168.7 255 38.8
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 9.4e-40 168.3 264 41.3
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 9.4e-40 168.3 265 39.2
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 9.4e-40 168.3 257 40.9
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 2.1e-39 167.2 157 49.0
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 2.7e-39 166.8 260 37.7
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 3.6e-39 166.4 187 46.5
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 6.1e-39 165.6 273 38.5
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 6.1e-39 165.6 289 36.7
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 7.9e-39 165.2 156 51.9
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 7.9e-39 165.2 255 37.6
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 1.0e-38 164.9 156 51.3
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 1.0e-38 164.9 300 37.7
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 3.9e-38 162.9 204 39.7
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 5.1e-38 162.5 265 39.6
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 5.1e-38 162.5 182 50.0
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 5.1e-38 162.5 182 50.0
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 5.1e-38 162.5 182 50.0
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 6.7e-38 162.2 149 53.7
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 1.9e-37 160.6 182 48.4
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 1.9e-37 160.6 163 50.3
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 1.9e-37 160.6 274 37.6
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 2.5e-37 160.2 270 38.5
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 5.7e-37 159.1 155 51.6
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 5.7e-37 159.1 157 52.2
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 2.2e-36 157.1 251 39.4
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.2e-36 157.1 145 53.1
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 6.3e-36 155.6 187 46.5
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 6.3e-36 155.6 163 46.0
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 8.2e-36 155.2 153 51.0
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 8.2e-36 155.2 153 51.0
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 8.2e-36 155.2 153 51.0
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 1.1e-35 154.8 155 51.6
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 1.1e-35 154.8 153 51.0
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 1.1e-35 154.8 150 52.7
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 1.4e-35 154.5 153 51.0
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 1.8e-35 154.1 289 35.6
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 5.3e-35 152.5 143 52.4
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 5.3e-35 152.5 149 47.7
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 6.9e-35 152.1 155 50.3
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 1.2e-34 151.4 274 34.7
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 1.3e-33 147.9 264 37.5
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 1.4e-32 144.4 147 44.9
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 1.9e-32 144.1 263 33.5
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 6.1e-31 139.0 196 41.3
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 6.7e-30 135.6 189 42.9
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 2.6e-29 133.7 247 35.2
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 5.7e-29 132.5 260 35.0
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 9.7e-29 131.7 181 42.5
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 2.8e-28 130.2 196 40.3
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 2.8e-28 130.2 181 42.5
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 4.8e-28 129.4 181 41.4
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 1.1e-27 128.3 190 44.7
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 3.1e-27 126.7 181 41.4
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 9.1e-27 125.2 174 43.7
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 2.0e-26 124.0 183 39.3
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 5.9e-26 122.5 127 48.0
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 1.0e-25 121.7 177 42.9
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 1.0e-25 121.7 322 32.0
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 2.2e-25 120.6 179 41.3
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 8.5e-25 118.6 188 39.4
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 1.1e-24 118.2 176 43.8
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 1.9e-24 117.5 187 38.5
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 2.5e-24 117.1 176 42.0
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 2.5e-24 117.1 165 43.0
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 3.2e-24 116.7 176 42.0
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 7.2e-24 115.5 179 39.7
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 3.0e-22 110.2 124 48.4
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 3.0e-22 110.2 82 63.4
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 1.7e-20 104.4 81 54.3
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 1.8e-19 100.9 261 30.3
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 5.3e-19 99.4 166 41.6
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 2.5e-16 90.5 65 60.0
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 3.0e-14 83.6 95 44.2
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 1.1e-11 75.1 65 47.7
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 1.8e-11 74.3 96 42.7
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 1.9e-08 64.3 82 36.6
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 1.2e-07 61.6 100 33.0
AagrBONN_evm.TU.Sc2ySwM_344.3697 Anthoceros agrestis HOM05D011398 ORTHO05D007243 1.0e-06 58.5 175 26.9
Pp3c19_7090 Physcomitrium patens HOM05D011398 ORTHO05D007243 1.4e-06 58.2 86 38.4


User provided reference genes

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