Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3672 Papaver somniferum HOM05D005538 ORTHO05D007055 2.2e-90 335.5 156 100.0
PSO017G1114 Papaver somniferum HOM05D005538 ORTHO05D007055 4.9e-90 334.3 156 99.4
Hma1.2p1_0459F.1_g157240 Hydrangea macrophylla HOM05D005538 ORTHO05D007055 7.1e-65 250.8 153 74.5
Peaxi162Scf00220g00119 Petunia axillaris HOM05D005538 ORTHO05D007055 3.5e-64 248.4 155 71.6
PGSC0003DMG400030010 Solanum tuberosum HOM05D005538 ORTHO05D007055 6.0e-64 247.7 156 69.9
Oeu003281.1 Olea europaea HOM05D005538 ORTHO05D007055 7.8e-64 247.3 155 73.5
Nn3g16327 Nelumbo nucifera HOM05D005538 ORTHO05D007055 3.9e-63 245.0 154 74.7
SalBow2G1516 Salvia bowleyana HOM05D005538 ORTHO05D007055 3.9e-63 245.0 154 74.0
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 6.6e-63 244.2 146 72.6
Sopen01g005330 Solanum pennellii HOM05D005538 ORTHO05D007055 1.1e-62 243.4 156 70.5
Actinidia30605 Actinidia chinensis HOM05D005538 ORTHO05D007055 1.5e-62 243.0 154 72.1
Migut.K01033 Erythranthe guttata HOM05D005538 ORTHO05D007055 1.9e-62 242.7 153 74.5
HanXRQChr06g0175181 Helianthus annuus HOM05D005538 ORTHO05D007055 1.9e-62 242.7 156 69.9
MBI07_g37483_MAGBIO Magnolia biondii HOM05D005538 ORTHO05D007055 1.9e-62 242.7 159 71.1
Solyc01g009780.3 Solanum lycopersicum HOM05D005538 ORTHO05D007055 3.3e-62 241.9 156 69.9
TAR622G0886 Trochodendron aralioides HOM05D005538 ORTHO05D007055 3.3e-62 241.9 154 73.4
Dinv06880 Davidia involucrata HOM05D005538 ORTHO05D007055 7.3e-62 240.7 154 72.7
Aqoxy3G01758 Aquilegia oxysepala HOM05D005538 ORTHO05D007055 9.6e-62 240.4 153 75.2
vmacro22631 Vaccinium macrocarpon HOM05D005538 ORTHO05D007055 1.6e-61 239.6 156 70.5
SGA_v2.0_scaffold80G25945 Striga asiatica HOM05D005538 ORTHO05D007055 2.1e-61 239.2 153 71.2
Actinidia22132 Actinidia chinensis HOM05D005538 ORTHO05D007055 2.8e-61 238.8 153 73.2
TWI18G0823 Tripterygium wilfordii HOM05D005538 ORTHO05D007055 4.8e-61 238.0 154 70.8
TAR371G0765 Trochodendron aralioides HOM05D005538 ORTHO05D007055 8.1e-61 237.3 154 69.5
ECA246G0794 Erigeron canadensis HOM05D005538 ORTHO05D007055 1.5e-59 233.0 160 67.5
CSS0040217 Camellia sinensis var. sinensis HOM05D005538 ORTHO05D007055 5.8e-59 231.1 154 70.1
TAR629G0377 Trochodendron aralioides HOM05D005538 ORTHO05D007055 9.9e-59 230.3 154 70.1
Duzib052G1117 Durio zibethinus HOM05D005538 ORTHO05D007055 1.3e-58 229.9 154 67.5
CAN.G1277.4 Capsicum annuum HOM05D005538 ORTHO05D007055 3.8e-58 228.4 158 65.2
CDE05G1586 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 3.8e-58 228.4 153 67.3
ATR0582G064 Amborella trichopoda HOM05D005538 ORTHO05D007055 4.9e-58 228.0 153 68.6
Ah.03g135760 Amaranthus hybridus HOM05D005538 ORTHO05D007055 6.4e-58 227.6 152 69.1
CDE05G2048 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 6.4e-58 227.6 153 66.7
Haze_12470 Corylus avellana HOM05D005538 ORTHO05D007055 6.4e-58 227.6 154 67.5
Cfa009412 Carpinus fangiana HOM05D005538 ORTHO05D007055 8.4e-58 227.3 154 66.9
HanXRQChr17g0540491 Helianthus annuus HOM05D005538 ORTHO05D007055 1.1e-57 226.9 153 68.0
GSVIVG01000954001 Vitis vinifera HOM05D005538 ORTHO05D007055 1.1e-57 226.9 122 82.0
Manes.08G103200 Manihot esculenta HOM05D005538 ORTHO05D007055 2.4e-57 225.7 151 67.5
CiPaw.05G104000 Carya illinoinensis HOM05D005538 ORTHO05D007055 3.2e-57 225.3 154 64.9
Thecc.02G196400 Theobroma cacao HOM05D005538 ORTHO05D007055 3.2e-57 225.3 154 64.9
CANSAT56G2313 Cannabis sativa HOM05D005538 ORTHO05D007055 5.4e-57 224.6 153 64.7
Sabra03G0121100 Salix brachista HOM05D005538 ORTHO05D007055 7.1e-57 224.2 132 75.8
Cc11_g17450 Coffea canephora HOM05D005538 ORTHO05D007055 9.3e-57 223.8 128 76.6
Hund25495 Selenicereus undatus HOM05D005538 ORTHO05D007055 1.2e-56 223.4 158 65.8
Gohir.A12G140500 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.6e-56 223.0 154 64.9
QL03p050357 Quercus lobata HOM05D005538 ORTHO05D007055 1.6e-56 223.0 125 77.6
Lj3A1076T34 Lonicera japonica HOM05D005538 ORTHO05D007055 2.1e-56 222.6 166 61.4
Manes.09G185800 Manihot esculenta HOM05D005538 ORTHO05D007055 2.7e-56 222.2 151 66.2
unitig_8.g3121 Utricularia gibba HOM05D005538 ORTHO05D007055 2.7e-56 222.2 152 65.8
Eucgr.B03544 Eucalyptus grandis HOM05D005538 ORTHO05D007055 3.5e-56 221.9 153 65.4
Potri.003G165900 Populus trichocarpa HOM05D005538 ORTHO05D007055 4.6e-56 221.5 132 75.0
MSTRG.469 Avicennia marina HOM05D005538 ORTHO05D007055 6.0e-56 221.1 169 58.6
Gorai.008G156500 Gossypium raimondii HOM05D005538 ORTHO05D007055 6.0e-56 221.1 153 65.4
Gohir.D12G145100 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.0e-55 220.3 135 71.9
Potri.001G061900 Populus trichocarpa HOM05D005538 ORTHO05D007055 1.3e-55 219.9 151 65.6
Ciclev10033047m.g Citrus clementina HOM05D005538 ORTHO05D007055 1.8e-55 219.5 154 64.3
COL.COLO4_34942 Corchorus olitorius HOM05D005538 ORTHO05D007055 3.0e-55 218.8 132 72.0
AUR62028865 Chenopodium quinoa HOM05D005538 ORTHO05D007055 3.9e-55 218.4 167 61.7
Duzib248G0674 Durio zibethinus HOM05D005538 ORTHO05D007055 3.9e-55 218.4 131 73.3
CiPaw.06G107500 Carya illinoinensis HOM05D005538 ORTHO05D007055 5.1e-55 218.0 126 77.0
MELO3C022346.2 Cucumis melo HOM05D005538 ORTHO05D007055 2.5e-54 215.7 154 61.7
EL10Ac6g13582 Beta vulgaris HOM05D005538 ORTHO05D007055 3.3e-54 215.3 157 63.1
CsaV3_6G007860 Cucumis sativus L. HOM05D005538 ORTHO05D007055 5.6e-54 214.5 154 61.7
Ah.02g131140 Amaranthus hybridus HOM05D005538 ORTHO05D007055 1.3e-53 213.4 150 64.7
MD13G1126300 Malus domestica HOM05D005538 ORTHO05D007055 2.1e-53 212.6 154 63.0
Gohir.A03G151200 Gossypium hirsutum HOM05D005538 ORTHO05D007055 3.7e-53 211.8 154 63.6
Gorai.005G195900 Gossypium raimondii HOM05D005538 ORTHO05D007055 3.7e-53 211.8 154 63.6
Glyma.18G301900 Glycine max HOM05D005538 ORTHO05D007055 4.8e-53 211.5 122 76.2
Glyma.08G360100 Glycine max HOM05D005538 ORTHO05D007055 6.2e-53 211.1 153 64.1
Gohir.D02G174200 Gossypium hirsutum HOM05D005538 ORTHO05D007055 8.1e-53 210.7 154 63.6
THA.LOC104825475 Tarenaya hassleriana HOM05D005538 ORTHO05D007055 1.4e-52 209.9 126 70.6
VMungo1383G2546 Vigna mungo HOM05D005538 ORTHO05D007055 9.0e-52 207.2 116 77.6
BcaNung01169 Brassica carinata HOM05D005538 ORTHO05D007055 4.5e-51 204.9 123 69.1
ClCG06G001820 Citrullus lanatus HOM05D005538 ORTHO05D007055 4.5e-51 204.9 154 61.0
Os02g0515600 Oryza sativa ssp. japonica HOM05D005538 ORTHO05D007055 4.5e-51 204.9 152 61.2
A02p01730 Brassica napus HOM05D005538 ORTHO05D007055 7.6e-51 204.1 126 67.5
BraA02t05152Z Brassica rapa HOM05D005538 ORTHO05D007055 7.6e-51 204.1 126 67.5
MD16G1126800 Malus domestica HOM05D005538 ORTHO05D007055 9.9e-51 203.8 154 59.1
Prupe.1G219100 Prunus persica HOM05D005538 ORTHO05D007055 9.9e-51 203.8 154 60.4
FAN12G2387 Fragaria x ananassa HOM05D005538 ORTHO05D007055 1.7e-50 203.0 149 63.8
C02p05970 Brassica napus HOM05D005538 ORTHO05D007055 2.2e-50 202.6 126 67.5
BolC2t06540H Brassica oleracea HOM05D005538 ORTHO05D007055 2.2e-50 202.6 126 67.5
Rhsim12G0021000 Rhododendron simsii HOM05D005538 ORTHO05D007055 2.2e-50 202.6 163 60.1
AT5G13190 Arabidopsis thaliana HOM05D005538 ORTHO05D007055 2.9e-50 202.2 126 67.5
BraA10t44563Z Brassica rapa HOM05D005538 ORTHO05D007055 2.9e-50 202.2 154 57.8
FAN17G2587 Fragaria x ananassa HOM05D005538 ORTHO05D007055 2.9e-50 202.2 130 69.2
Gohir.D01G019700 Gossypium hirsutum HOM05D005538 ORTHO05D007055 2.9e-50 202.2 156 60.3
AL6G23800 Arabidopsis lyrata HOM05D005538 ORTHO05D007055 3.8e-50 201.8 126 67.5
Thhalv10014995m.g Eutrema salsugineum HOM05D005538 ORTHO05D007055 4.9e-50 201.4 126 66.7
Gorai.002G022100 Gossypium raimondii HOM05D005538 ORTHO05D007055 4.9e-50 201.4 156 60.3
Carub.0006s1136 Capsella rubella HOM05D005538 ORTHO05D007055 6.4e-50 201.1 126 66.7
Aa31LG3G14470 Aethionema arabicum HOM05D005538 ORTHO05D007055 1.1e-49 200.3 126 66.7
Gohir.A01G021300 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.1e-49 200.3 156 59.6
C09p63880 Brassica napus HOM05D005538 ORTHO05D007055 1.4e-49 199.9 136 64.0
BolC9t59228H Brassica oleracea HOM05D005538 ORTHO05D007055 1.4e-49 199.9 136 64.0
Phvul.008G000500 Phaseolus vulgaris HOM05D005538 ORTHO05D007055 1.4e-49 199.9 120 73.3
RcHm_v2.0_Chr4g0429351 Rosa chinensis HOM05D005538 ORTHO05D007055 1.4e-49 199.9 154 61.0
Sp6g30790 Schrenkiella parvula HOM05D005538 ORTHO05D007055 1.9e-49 199.5 126 66.7
Sed0021477 Sechium edule HOM05D005538 ORTHO05D007055 3.2e-49 198.7 154 57.8
A10p25020 Brassica napus HOM05D005538 ORTHO05D007055 4.2e-49 198.4 155 57.4
FAN07G2678 Fragaria x ananassa HOM05D005538 ORTHO05D007055 9.3e-49 197.2 137 63.5
Ca_06515_v3 Cicer arietinum L. HOM05D005538 ORTHO05D007055 1.8e-47 193.0 112 72.3
Psat3g208320 Pisum sativum HOM05D005538 ORTHO05D007055 5.1e-47 191.4 113 72.6
TPR.G15629 Trifolium pratense HOM05D005538 ORTHO05D007055 6.7e-47 191.0 112 73.2
Medtr7g005440 Medicago truncatula HOM05D005538 ORTHO05D007055 1.1e-46 190.3 113 71.7
CARHR200280 Cardamine hirsuta HOM05D005538 ORTHO05D007055 5.6e-46 188.0 112 70.5
Lj1g0020005 Lotus japonicus HOM05D005538 ORTHO05D007055 5.6e-46 188.0 112 74.1
Hund28220 Selenicereus undatus HOM05D005538 ORTHO05D007055 3.7e-45 185.3 157 57.3
Hund28225 Selenicereus undatus HOM05D005538 ORTHO05D007055 3.7e-45 185.3 157 57.3
Sc04g0010460 Simmondsia chinensis HOM05D005538 ORTHO05D007055 8.2e-45 184.1 123 65.9
Zm00001eb241880 Zea mays HOM05D005538 ORTHO05D007055 2.0e-43 179.5 181 50.8
FvH4_4g23080 Fragaria vesca HOM05D005538 ORTHO05D007055 1.9e-38 162.9 116 62.1
AagrBONN_evm.TU.Sc2ySwM_117.1139 Anthoceros agrestis HOM05D005538 ORTHO05D007055 2.2e-37 159.5 119 56.3
Atru.chr11.2402 Acer truncatum HOM05D005538 ORTHO05D007055 4.8e-37 158.3 177 45.8
CBR_g4442 Chara braunii HOM05D005538 ORTHO05D007055 2.0e-35 152.9 148 47.3
SMO271G0002 Selaginella moellendorffii HOM05D005538 ORTHO05D007055 2.0e-35 152.9 119 57.1
TWI75G1796 Tripterygium wilfordii HOM05D005538 ORTHO05D007055 5.5e-33 144.8 87 73.6
Pp3c26_1170 Physcomitrium patens HOM05D005538 ORTHO05D007055 1.6e-32 143.3 157 46.5
AagrBONN_evm.TU.Sc2ySwM_117.1282 Anthoceros agrestis HOM05D005538 ORTHO05D007055 3.9e-31 138.7 147 45.6
HPP92_011548 Vanilla planifolia HOM05D005538 ORTHO05D007055 2.2e-29 132.9 75 78.7
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 5.0e-26 121.7 129 50.4
Oeu039177.1 Olea europaea HOM05D005538 ORTHO05D007055 1.8e-23 113.2 59 81.4
Cpa.g.sc123.51 Carica papaya HOM05D005538 ORTHO05D007055 5.7e-22 108.2 58 79.3
TAR629G2749 Trochodendron aralioides HOM05D005538 ORTHO05D007055 6.3e-21 104.8 85 58.8
TAR628G0286 Trochodendron aralioides HOM05D000367 ORTHO05D001438 7.0e-20 101.3 84 57.1
SalBow8G4168 Salvia bowleyana HOM05D005538 ORTHO05D007055 2.0e-19 99.8 83 57.8
Lsat_1_v5_gn_6_34980 Lactuca sativa HOM05D005538 ORTHO05D007055 1.3e-18 97.1 118 44.9
TAR623G1654 Trochodendron aralioides HOM05D005538 ORTHO05D007055 2.2e-18 96.3 84 56.0
TAR623G0421 Trochodendron aralioides HOM05D004785 ORTHO05D005704 5.5e-17 91.7 70 60.0
Hma1.2p1_0365F.1_g136780 Hydrangea macrophylla HOM05D005538 ORTHO05D007055 1.2e-16 90.5 75 60.0
RcHm_v2.0_Chr4g0404941 Rosa chinensis HOM05D005538 ORTHO05D007055 4.1e-12 75.5 105 41.0
SalBow8G3396 Salvia bowleyana HOM05D018271 ORTHO05D007055 1.0e-10 70.9 62 56.5
RcHm_v2.0_Chr1g0337501 Rosa chinensis HOM05D005538 ORTHO05D007055 1.7e-10 70.1 94 40.4
SEGI_18844 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 5.0e-10 68.6 54 51.9
DCAR_028448 Daucus carota HOM05D005538 ORTHO05D007055 1.1e-09 67.4 81 40.7
SEGI_11247 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 4.2e-09 65.5 52 50.0
BcaB01g05369 Brassica carinata HOM05D005538 ORTHO05D007055 5.5e-09 65.1 43 55.8
SEGI_18352 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 1.2e-08 63.9 52 50.0
SEGI_29074 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 1.6e-08 63.5 51 51.0
SEGI_30741 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 1.6e-08 63.5 51 51.0
HPP92_011549 Vanilla planifolia HOM05D005538 ORTHO05D431340 4.0e-07 58.9 59 47.5
RcHm_v2.0_Chr5g0057011 Rosa chinensis HOM05D005538 ORTHO05D007055 3.3e-06 55.8 102 32.4


User provided reference genes

Program Settings