Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 3.0e-240 834.7 403 100.0
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 1.5e-223 779.2 403 92.3
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 7.3e-154 547.7 396 67.9
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 3.0e-152 542.3 400 68.0
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 7.5e-151 537.7 394 66.8
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 2.3e-139 499.6 399 63.4
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 2.5e-138 496.1 393 64.4
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 5.6e-138 495.0 401 63.3
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 9.5e-138 494.2 398 63.3
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 1.2e-135 487.3 402 62.4
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 2.2e-134 483.0 400 62.0
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 1.4e-133 480.3 402 61.2
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 5.4e-133 478.4 401 61.3
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.7e-132 476.1 398 61.3
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 3.5e-132 475.7 398 61.6
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 7.8e-132 474.6 398 61.3
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 1.7e-131 473.4 398 61.3
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 3.0e-131 472.6 400 58.0
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 8.6e-131 471.1 399 62.7
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.1e-130 470.7 405 61.2
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 1.1e-130 470.7 400 60.5
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 1.5e-130 470.3 400 57.0
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 4.3e-130 468.8 406 56.4
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 8.1e-129 464.5 406 55.9
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 1.2e-127 460.7 391 59.8
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 1.2e-127 460.7 400 59.2
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 1.2e-127 460.7 401 59.6
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 1.7e-126 456.8 397 59.4
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 2.2e-126 456.4 395 59.2
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 3.8e-126 455.7 401 59.1
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 1.9e-125 453.4 400 58.2
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 1.2e-124 450.7 395 59.7
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 2.1e-124 449.9 399 58.1
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 2.7e-124 449.5 393 62.3
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 3.5e-124 449.1 398 58.5
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 6.0e-124 448.4 395 58.7
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 7.8e-124 448.0 401 59.1
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 1.7e-123 446.8 401 58.4
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 1.7e-123 446.8 392 58.4
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 2.3e-123 446.4 398 58.3
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 6.6e-123 444.9 398 57.5
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 6.6e-123 444.9 394 58.9
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 1.9e-122 443.4 381 60.6
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 9.6e-122 441.0 397 58.7
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 1.8e-120 436.8 404 54.5
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 4.0e-120 435.6 400 56.8
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 1.2e-119 434.1 398 55.8
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 3.4e-119 432.6 396 55.8
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 5.8e-119 431.8 389 58.1
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 1.7e-118 430.3 381 57.7
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 4.9e-118 428.7 399 57.6
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 1.4e-117 427.2 416 54.3
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 3.2e-117 426.0 400 53.0
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 5.4e-117 425.2 405 54.3
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 9.3e-117 424.5 400 57.2
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 9.3e-117 424.5 400 57.2
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 2.7e-116 422.9 396 56.8
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 2.7e-116 422.9 399 55.1
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 4.6e-116 422.2 401 56.6
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 6.0e-116 421.8 396 56.8
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 6.0e-116 421.8 422 54.7
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 1.5e-114 417.2 401 54.9
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 1.9e-114 416.8 399 53.4
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 2.5e-114 416.4 384 57.3
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 9.6e-114 414.5 398 55.5
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 4.8e-113 412.1 392 56.9
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 1.2e-111 407.5 402 53.7
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 4.5e-111 405.6 384 56.0
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 4.5e-111 405.6 378 57.4
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 7.6e-111 404.8 436 49.8
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 9.9e-111 404.4 402 53.5
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 9.9e-111 404.4 305 65.6
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.7e-110 403.7 457 48.1
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 1.3e-107 394.0 345 60.3
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 2.3e-107 393.3 395 53.9
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 3.0e-107 392.9 402 54.2
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 5.1e-107 392.1 327 61.2
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 3.3e-106 389.4 405 52.8
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 1.5e-103 380.6 405 50.6
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 3.8e-102 375.9 397 51.1
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.9e-101 373.6 419 47.7
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 2.5e-98 363.2 401 50.6
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 2.8e-97 359.8 294 59.2
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 2.6e-87 326.6 240 67.9
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 7.6e-87 325.1 324 53.4
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 5.0e-86 322.4 286 61.2
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 3.6e-84 316.2 336 51.5
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 3.6e-84 316.2 333 53.8
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 7.4e-82 308.5 400 44.2
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 8.2e-81 305.1 424 45.0
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 2.6e-79 300.1 340 49.1
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 1.3e-78 297.7 399 42.9
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 1.7e-78 297.4 465 38.1
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 1.9e-77 293.9 399 41.9
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 7.4e-74 282.0 317 49.8
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 6.5e-70 268.9 286 50.3
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.9e-62 243.4 165 64.8
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 2.7e-60 236.9 286 47.2
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 2.7e-60 236.9 306 44.8
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 7.0e-56 222.2 142 71.1
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 1.3e-54 218.0 127 76.4
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 2.2e-54 217.2 290 43.1
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 1.5e-53 214.5 278 46.4
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 1.6e-52 211.1 273 46.9
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 8.3e-49 198.7 254 44.5
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 1.4e-48 198.0 110 83.6
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 3.1e-48 196.8 248 46.8
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 7.2e-45 185.7 150 56.0
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 3.0e-43 180.3 238 44.5
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 6.8e-43 179.1 119 62.2
VMungo0251G3333 Vigna mungo HOM05D005922 ORTHO05D006934 1.2e-42 178.3 102 75.5
BcaB05g23450 Brassica carinata HOM05D005922 ORTHO05D006934 4.4e-42 176.4 112 68.8
Cre12.g486551 Chlamydomonas reinhardtii HOM05D005922 ORTHO05D006934 7.8e-39 165.6 186 46.8
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 7.3e-37 159.1 93 78.5
Manes.18G025338 Manihot esculenta HOM05D005922 ORTHO05D006934 8.0e-36 155.6 91 79.1
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 1.6e-28 131.3 139 53.2
BcaB02g11286 Brassica carinata HOM05D005922 ORTHO05D006934 1.1e-27 128.6 112 58.9
Zm00001eb399130 Zea mays HOM05D005922 ORTHO05D006934 8.9e-27 125.6 91 62.6
arahy.Tifrunner.gnm1.ann1.B3UXS8 Arachis hypogaea HOM05D005922 ORTHO05D006934 1.7e-22 111.3 68 76.5
arahy.Tifrunner.gnm1.ann1.62WV2A Arachis hypogaea HOM05D005922 ORTHO05D006934 2.8e-20 104.0 102 47.1
arahy.Tifrunner.gnm1.ann1.QG6U7W Arachis hypogaea HOM05D005922 ORTHO05D006934 2.8e-20 104.0 102 47.1
PRCOL_00005504 Prasinoderma coloniale HOM05D005922 ORTHO05D006934 5.2e-19 99.8 220 30.9
arahy.Tifrunner.gnm1.ann1.39MP9Z Arachis hypogaea HOM05D002181 ORTHO05D003287 1.2e-15 88.6 72 55.6
arahy.Tifrunner.gnm1.ann1.10JCRR Arachis hypogaea HOM05D000690 ORTHO05D006934 2.7e-15 87.4 50 72.0
arahy.Tifrunner.gnm1.ann1.XTWJ7M Arachis hypogaea HOM05D002181 ORTHO05D006934 4.6e-15 86.7 69 58.0
CDE11G0599 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 6.0e-15 86.3 83 53.0
SEGI_24854 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 1.0e-14 85.5 227 29.5
Haze_10820 Corylus avellana HOM05D005922 ORTHO05D006934 1.3e-14 85.1 82 58.5
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 5.6e-13 79.7 49 65.3
arahy.Tifrunner.gnm1.ann1.QNE0FJ Arachis hypogaea HOM05D002181 ORTHO05D003287 2.8e-12 77.4 49 61.2
Manes.17G089020 Manihot esculenta HOM05D005922 ORTHO05D006934 1.7e-09 68.2 80 51.2
MCO06G046 Micromonas commoda HOM05D005922 ORTHO05D006934 2.7e-07 60.8 102 34.3
Zm00001eb371330 Zea mays HOM05D005922 ORTHO05D006934 3.5e-07 60.5 41 61.0
A02p14700 Brassica napus HOM05D005922 ORTHO05D006934 7.8e-07 59.3 165 26.7
BraA02t06537Z Brassica rapa HOM05D005922 ORTHO05D006934 7.8e-07 59.3 165 26.7


User provided reference genes

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