Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3375 Papaver somniferum HOM05D013321 ORTHO05D302577 3.0e-137 491.9 252 100.0
PSO782G0334 Papaver somniferum HOM05D013321 ORTHO05D305364 2.6e-101 372.5 254 78.7
PSO478G1486 Papaver somniferum HOM05D013321 ORTHO05D302527 2.9e-100 369.0 254 78.3
PSO349G0025 Papaver somniferum HOM05D013321 ORTHO05D302247 1.8e-17 94.0 194 34.5
PSO765G0082 Papaver somniferum HOM05D013321 ORTHO05D304512 3.1e-17 93.2 157 41.4
PSO210G6715 Papaver somniferum HOM05D013321 ORTHO05D305304 1.2e-16 91.3 250 30.0
PSO675G1393 Papaver somniferum HOM05D000062 ORTHO05D303422 5.4e-14 82.4 251 29.1
PSO198G0009 Papaver somniferum HOM05D013321 ORTHO05D305121 5.6e-11 72.4 77 54.5
PSO675G8012 Papaver somniferum HOM05D013321 ORTHO05D304638 2.8e-10 70.1 293 27.6
PRCOL_00001396 Prasinoderma coloniale HOM05D000062 ORTHO05D000043 2.8e-10 70.1 230 27.4
Lsat_1_v5_gn_9_113681 Lactuca sativa HOM05D000062 ORTHO05D000043 4.0e-09 66.2 232 28.9
ECA240G2027 Erigeron canadensis HOM05D000062 ORTHO05D000043 6.8e-09 65.5 232 28.0
Haze_27056 Corylus avellana HOM05D000062 ORTHO05D000043 8.9e-09 65.1 231 29.9
Aqoxy5G01809 Aquilegia oxysepala HOM05D000062 ORTHO05D000043 1.2e-08 64.7 212 27.8
ECA234G0499 Erigeron canadensis HOM05D000062 ORTHO05D000043 1.2e-08 64.7 234 26.5
Dinv08969 Davidia involucrata HOM05D000062 ORTHO05D000043 1.5e-08 64.3 236 28.4
Gohir.D12G018000 Gossypium hirsutum HOM05D000062 ORTHO05D000043 1.5e-08 64.3 232 27.6
Gohir.D12G018100 Gossypium hirsutum HOM05D000062 ORTHO05D000043 1.5e-08 64.3 232 27.6
Gorai.008G018200 Gossypium raimondii HOM05D000062 ORTHO05D000043 1.5e-08 64.3 232 27.6
Gorai.008G018300 Gossypium raimondii HOM05D000062 ORTHO05D000043 1.5e-08 64.3 232 27.6
CiPaw.05G027000 Carya illinoinensis HOM05D000062 ORTHO05D000043 2.0e-08 63.9 172 30.2
Gorai.008G018400 Gossypium raimondii HOM05D000062 ORTHO05D000043 2.0e-08 63.9 229 26.6
CiPaw.06G160800 Carya illinoinensis HOM05D000062 ORTHO05D000043 2.6e-08 63.5 172 29.7
HanXRQChr05g0136881 Helianthus annuus HOM05D000062 ORTHO05D000043 2.6e-08 63.5 232 27.2
Thecc.02G125100 Theobroma cacao HOM05D000062 ORTHO05D000043 2.6e-08 63.5 232 27.2
TAR625G0328 Trochodendron aralioides HOM05D000062 ORTHO05D000043 2.6e-08 63.5 236 28.4
Duzib052G0770 Durio zibethinus HOM05D000062 ORTHO05D000043 3.4e-08 63.2 232 27.2
Gohir.A12G017300 Gossypium hirsutum HOM05D000062 ORTHO05D000043 3.4e-08 63.2 232 27.2
Gohir.A12G017400 Gossypium hirsutum HOM05D000062 ORTHO05D000043 3.4e-08 63.2 232 27.2
HanXRQChr05g0136861 Helianthus annuus HOM05D000062 ORTHO05D000043 4.4e-08 62.8 232 27.2
SMO347G0010 Selaginella moellendorffii HOM05D000062 ORTHO05D000043 5.8e-08 62.4 233 26.2
ATR0800G178 Amborella trichopoda HOM05D000062 ORTHO05D000043 7.6e-08 62.0 232 26.7
Duzib132G0431 Durio zibethinus HOM05D000062 ORTHO05D000043 9.9e-08 61.6 232 26.3
Potri.009G079700 Populus trichocarpa HOM05D000062 ORTHO05D000043 9.9e-08 61.6 232 27.2
Lsat_1_v5_gn_5_110901 Lactuca sativa HOM05D000062 ORTHO05D000043 1.3e-07 61.2 232 27.6
Aqoxy5G00457 Aquilegia oxysepala HOM05D000062 ORTHO05D000043 1.7e-07 60.8 232 28.0
C02p03940 Brassica napus HOM05D000062 ORTHO05D000043 1.7e-07 60.8 231 26.0
HanXRQChr10g0291221 Helianthus annuus HOM05D000062 ORTHO05D000043 1.7e-07 60.8 232 27.6
MBI16_g10453_MAGBIO Magnolia biondii HOM05D000062 ORTHO05D000043 1.7e-07 60.8 172 29.1
Potri.001G285500 Populus trichocarpa HOM05D000062 ORTHO05D000043 1.7e-07 60.8 172 29.1
SEGI_09923 Sequoiadendron giganteum HOM05D000062 ORTHO05D000043 1.7e-07 60.8 236 27.1
THA.LOC104804183 Tarenaya hassleriana HOM05D000062 ORTHO05D000043 1.7e-07 60.8 233 27.5
TAR381G0703 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.7e-07 60.8 232 26.7
Zm00001eb043470 Zea mays HOM05D000062 ORTHO05D000043 1.7e-07 60.8 172 28.5
MSTRG.16632 Avicennia marina HOM05D000062 ORTHO05D000043 2.2e-07 60.5 232 27.2
Haze_10396 Corylus avellana HOM05D000062 ORTHO05D000043 2.2e-07 60.5 236 27.1
Manes.10G094100 Manihot esculenta HOM05D000062 ORTHO05D000043 2.2e-07 60.5 232 27.6
Nn4g25090 Nelumbo nucifera HOM05D000062 ORTHO05D000043 2.2e-07 60.5 236 27.1
Prupe.8G075000 Prunus persica HOM05D000062 ORTHO05D000043 2.2e-07 60.5 236 26.7
PGR102G0658 Punica granatum HOM05D000062 ORTHO05D000043 2.2e-07 60.5 172 28.5
Rhsim05G0096400 Rhododendron simsii HOM05D000062 ORTHO05D000043 2.2e-07 60.5 172 29.7
BcaC01g00367 Brassica carinata HOM05D000062 ORTHO05D000043 2.9e-07 60.1 236 26.3
A01p01140 Brassica napus HOM05D000062 ORTHO05D000043 2.9e-07 60.1 226 26.1
A08p22930 Brassica napus HOM05D000062 ORTHO05D000043 2.9e-07 60.1 233 26.6
C03p78930 Brassica napus HOM05D000062 ORTHO05D000043 2.9e-07 60.1 236 26.3
BolC3t20137H Brassica oleracea HOM05D000062 ORTHO05D000043 2.9e-07 60.1 236 26.3
BraA01t00112Z Brassica rapa HOM05D000062 ORTHO05D000043 2.9e-07 60.1 226 26.1
BraA08t34255Z Brassica rapa HOM05D000062 ORTHO05D000043 2.9e-07 60.1 233 26.6
Nn1g05670 Nelumbo nucifera HOM05D000062 ORTHO05D000043 2.9e-07 60.1 172 28.5
Sabra09G0061700 Salix brachista HOM05D000062 ORTHO05D000043 2.9e-07 60.1 232 26.7
Sabra16G0177900 Salix brachista HOM05D000062 ORTHO05D000043 2.9e-07 60.1 232 26.7
Hund16614 Selenicereus undatus HOM05D000062 ORTHO05D000043 2.9e-07 60.1 235 25.1
SGA_v2.0_scaffold32G12945 Striga asiatica HOM05D000062 ORTHO05D000043 2.9e-07 60.1 236 26.7
THA.LOC104807660 Tarenaya hassleriana HOM05D000062 ORTHO05D000043 2.9e-07 60.1 233 27.5
TAR628G0145 Trochodendron aralioides HOM05D000062 ORTHO05D000043 2.9e-07 60.1 236 27.5
Aqoxy4G02256 Aquilegia oxysepala HOM05D000062 ORTHO05D000043 3.7e-07 59.7 236 27.5
MSTRG.5294 Avicennia marina HOM05D000062 ORTHO05D000043 3.7e-07 59.7 172 29.1
Eucgr.G01045 Eucalyptus grandis HOM05D000062 ORTHO05D000043 3.7e-07 59.7 236 26.3
Prupe.3G077000 Prunus persica HOM05D000062 ORTHO05D000043 3.7e-07 59.7 172 29.1
TAR381G1394 Trochodendron aralioides HOM05D000062 ORTHO05D000043 3.7e-07 59.7 172 29.1
vmacro19597 Vaccinium macrocarpon HOM05D000062 ORTHO05D000043 3.7e-07 59.7 236 27.1
GSVIVG01038517001 Vitis vinifera HOM05D000062 ORTHO05D000043 3.7e-07 59.7 172 29.1
C01p01280 Brassica napus HOM05D000062 ORTHO05D000043 4.9e-07 59.3 236 26.7
CARHR246320 Cardamine hirsuta HOM05D000062 ORTHO05D000043 4.9e-07 59.3 236 26.3
CDE02G4530 Ceratophyllum demersum HOM05D000062 ORTHO05D000043 4.9e-07 59.3 172 29.1
Ciclev10027943m.g Citrus clementina HOM05D000062 ORTHO05D000043 4.9e-07 59.3 169 27.2
COL.COLO4_11679 Corchorus olitorius HOM05D000062 ORTHO05D000043 4.9e-07 59.3 172 29.7
Lj9A342G52 Lonicera japonica HOM05D000062 ORTHO05D000043 4.9e-07 59.3 232 26.3
MD05G1049700 Malus domestica HOM05D000062 ORTHO05D000043 4.9e-07 59.3 236 26.3
Nn5g29781 Nelumbo nucifera HOM05D000062 ORTHO05D000043 4.9e-07 59.3 172 29.7
Nitab4.5_0002290g0030 Nicotiana tabacum HOM05D000062 ORTHO05D000043 4.9e-07 59.3 236 26.7
Nitab4.5_0025822g0010 Nicotiana tabacum HOM05D000062 ORTHO05D000043 4.9e-07 59.3 236 26.7
QL11p026591 Quercus lobata HOM05D000062 ORTHO05D000043 4.9e-07 59.3 172 28.5
SalBow4G0839 Salvia bowleyana HOM05D000062 ORTHO05D000043 4.9e-07 59.3 244 26.2
SEGI_26177 Sequoiadendron giganteum HOM05D000062 ORTHO05D000043 4.9e-07 59.3 164 28.0
Zm00001eb220140 Zea mays HOM05D000062 ORTHO05D000043 4.9e-07 59.3 172 27.3
BcaNung00961 Brassica carinata HOM05D000062 ORTHO05D000043 6.4e-07 58.9 226 25.7
BolC1t00125H Brassica oleracea HOM05D000062 ORTHO05D000043 6.4e-07 58.9 226 25.7
CSS0049484 Camellia sinensis var. sinensis HOM05D000062 ORTHO05D000043 6.4e-07 58.9 172 29.1
Duzib147G0818 Durio zibethinus HOM05D000062 ORTHO05D000043 6.4e-07 58.9 172 29.1
FAN15G2921 Fragaria x ananassa HOM05D000062 ORTHO05D000043 6.4e-07 58.9 236 26.3
FAN20G2947 Fragaria x ananassa HOM05D000062 ORTHO05D000043 6.4e-07 58.9 236 26.3
FAN27G2951 Fragaria x ananassa HOM05D000062 ORTHO05D000043 6.4e-07 58.9 236 26.3
MBI16_g36496_MAGBIO Magnolia biondii HOM05D000062 ORTHO05D000043 6.4e-07 58.9 236 27.1
MD10G1056800 Malus domestica HOM05D000062 ORTHO05D000043 6.4e-07 58.9 236 26.3
Nitab4.5_0002290g0040 Nicotiana tabacum HOM05D000062 ORTHO05D000043 6.4e-07 58.9 236 26.7
Nitab4.5_0004008g0070 Nicotiana tabacum HOM05D000062 ORTHO05D000043 6.4e-07 58.9 236 26.7
RcHm_v2.0_Chr6g0269491 Rosa chinensis HOM05D000062 ORTHO05D000043 6.4e-07 58.9 236 26.3
Thecc.01G083800 Theobroma cacao HOM05D000062 ORTHO05D000043 6.4e-07 58.9 172 29.1
HPP92_014393 Vanilla planifolia HOM05D000062 ORTHO05D000043 6.4e-07 58.9 233 24.9
GSVIVG01006769001 Vitis vinifera HOM05D000062 ORTHO05D000043 6.4e-07 58.9 172 29.1
Migut.N01111 Erythranthe guttata HOM05D000062 ORTHO05D000043 8.3e-07 58.5 172 28.5
FvH4_2g11170 Fragaria vesca HOM05D000062 ORTHO05D000043 8.3e-07 58.5 236 25.8
FAN24G1783 Fragaria x ananassa HOM05D000062 ORTHO05D000043 8.3e-07 58.5 236 25.8
Gohir.D11G214600 Gossypium hirsutum HOM05D000062 ORTHO05D000043 8.3e-07 58.5 172 29.1
MD17G1201200 Malus domestica HOM05D000062 ORTHO05D000043 8.3e-07 58.5 169 26.6
Oeu010202.1 Olea europaea HOM05D000062 ORTHO05D000043 8.3e-07 58.5 236 26.3
Oeu014205.1 Olea europaea HOM05D000062 ORTHO05D000043 8.3e-07 58.5 172 28.5
Oeu033796.1 Olea europaea HOM05D000062 ORTHO05D000043 8.3e-07 58.5 236 26.7
TWI14G0191 Tripterygium wilfordii HOM05D000062 ORTHO05D000043 8.3e-07 58.5 172 27.3
ATR0605G346 Amborella trichopoda HOM05D000062 ORTHO05D000043 1.1e-06 58.2 236 26.3
CSS0007341 Camellia sinensis var. sinensis HOM05D000062 ORTHO05D000043 1.1e-06 58.2 172 29.1
Cpa.g.sc20.39 Carica papaya HOM05D000062 ORTHO05D000043 1.1e-06 58.2 172 27.3
DCAR_029280 Daucus carota HOM05D000062 ORTHO05D000043 1.1e-06 58.2 233 26.6
Gohir.A11G208901 Gossypium hirsutum HOM05D000062 ORTHO05D000043 1.1e-06 58.2 172 29.1
Oeu010514.1 Olea europaea HOM05D000062 ORTHO05D000043 1.1e-06 58.2 172 27.9
Os03g0113700 Oryza sativa ssp. japonica HOM05D000062 ORTHO05D000043 1.1e-06 58.2 172 28.5
PGR142G0450 Punica granatum HOM05D000062 ORTHO05D000043 1.1e-06 58.2 172 27.9
Sc07g0000330 Simmondsia chinensis HOM05D000062 ORTHO05D000043 1.1e-06 58.2 169 25.4
Solyc01g106260.3 Solanum lycopersicum HOM05D000062 ORTHO05D000043 1.1e-06 58.2 172 27.9
Sopen01g048650 Solanum pennellii HOM05D000062 ORTHO05D000043 1.1e-06 58.2 172 27.9
PGSC0003DMG400003122 Solanum tuberosum HOM05D000062 ORTHO05D000043 1.1e-06 58.2 172 27.9
TWI59G0217 Tripterygium wilfordii HOM05D000062 ORTHO05D000043 1.1e-06 58.2 232 25.9
HPP92_025413 Vanilla planifolia HOM05D000062 ORTHO05D000043 1.1e-06 58.2 172 27.9
Atru.chr6.1349 Acer truncatum HOM05D000062 ORTHO05D000043 1.4e-06 57.8 169 26.6
Aa31LG6G14830 Aethionema arabicum HOM05D000062 ORTHO05D000043 1.4e-06 57.8 173 27.7
CAN.G504.42 Capsicum annuum HOM05D000062 ORTHO05D000043 1.4e-06 57.8 172 27.9
Cfa004803 Carpinus fangiana HOM05D004672 ORTHO05D005732 1.4e-06 57.8 172 28.5
Solyc01g106210.3 Solanum lycopersicum HOM05D000062 ORTHO05D000043 1.4e-06 57.8 169 26.6
Sopen01g048620 Solanum pennellii HOM05D000062 ORTHO05D000043 1.4e-06 57.8 169 26.6
PGSC0003DMG400010677 Solanum tuberosum HOM05D000062 ORTHO05D000043 1.4e-06 57.8 169 26.6
TAR376G0992 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.4e-06 57.8 172 29.1
Ah.01g007230 Amaranthus hybridus HOM05D000062 ORTHO05D000043 1.9e-06 57.4 153 27.5
Ah.03g134380 Amaranthus hybridus HOM05D000062 ORTHO05D000043 1.9e-06 57.4 169 26.0
BcaNung00964 Brassica carinata HOM05D000062 ORTHO05D000043 1.9e-06 57.4 199 26.6
CAN.G504.45 Capsicum annuum HOM05D000062 ORTHO05D000043 1.9e-06 57.4 172 27.9
Cc07_g07860 Coffea canephora HOM05D000062 ORTHO05D000043 1.9e-06 57.4 169 26.6
MBI04_g42541_MAGBIO Magnolia biondii HOM05D000062 ORTHO05D000043 1.9e-06 57.4 236 26.3
Manes.07G046700 Manihot esculenta HOM05D000062 ORTHO05D000043 1.9e-06 57.4 232 26.3
Peaxi162Scf00152g00729 Petunia axillaris HOM05D000062 ORTHO05D000043 1.9e-06 57.4 172 27.9
unitig_61.g26047 Utricularia gibba HOM05D000062 ORTHO05D000043 1.9e-06 57.4 236 26.3
AT5G09590 Arabidopsis thaliana HOM05D000062 ORTHO05D000043 2.4e-06 57.0 169 26.6
MSTRG.20254 Avicennia marina HOM05D000062 ORTHO05D000043 2.4e-06 57.0 172 27.9
EL10Ac9g22124 Beta vulgaris HOM05D000062 ORTHO05D000043 2.4e-06 57.0 179 26.8
Ciclev10000502m.g Citrus clementina HOM05D000062 ORTHO05D000043 2.4e-06 57.0 172 27.3
Lj4g0006615 Lotus japonicus HOM05D000062 ORTHO05D000043 2.4e-06 57.0 232 26.7
SGA_v2.0_scaffold83G26393 Striga asiatica HOM05D000062 ORTHO05D000043 2.4e-06 57.0 172 27.3
Aqoxy6G00638 Aquilegia oxysepala HOM05D000062 ORTHO05D000043 3.2e-06 56.6 169 25.4
AL6G20000 Arabidopsis lyrata HOM05D000062 ORTHO05D000043 3.2e-06 56.6 169 26.6
EL10Ac6g13304 Beta vulgaris HOM05D000062 ORTHO05D000043 3.2e-06 56.6 152 27.6
Cpa.g.sc755.2 Carica papaya HOM05D000062 ORTHO05D000043 3.2e-06 56.6 172 27.9
CiPaw.08G145300 Carya illinoinensis HOM05D000062 ORTHO05D000043 3.2e-06 56.6 172 29.1
CBR_g48341 Chara braunii HOM05D000062 ORTHO05D000043 3.2e-06 56.6 233 26.6
MELO3C018045.2 Cucumis melo HOM05D000062 ORTHO05D000043 3.2e-06 56.6 236 26.3
CsaV3_4G014660 Cucumis sativus L. HOM05D000062 ORTHO05D000043 3.2e-06 56.6 236 26.3
Dinv36976 Davidia involucrata HOM05D000062 ORTHO05D000043 3.2e-06 56.6 248 27.4
Migut.B00523 Erythranthe guttata HOM05D000062 ORTHO05D000043 3.2e-06 56.6 167 29.9
Lalb_Chr16g0383071 Lupinus albus HOM05D000062 ORTHO05D000043 3.2e-06 56.6 172 27.9
Psat1g212880 Pisum sativum HOM05D000062 ORTHO05D000043 3.2e-06 56.6 172 27.9
SalBow6G2802 Salvia bowleyana HOM05D000062 ORTHO05D000043 3.2e-06 56.6 172 28.5
Hma1.2p1_2015F.1_g311135 Hydrangea macrophylla HOM05D000062 ORTHO05D000043 4.1e-06 56.2 156 30.1
Medtr4g092920 Medicago truncatula HOM05D000062 ORTHO05D000043 4.1e-06 56.2 236 25.4
Peaxi162Scf00003g03027 Petunia axillaris HOM05D000062 ORTHO05D000043 4.1e-06 56.2 172 27.3
Sed0007852 Sechium edule HOM05D000062 ORTHO05D000043 4.1e-06 56.2 236 26.7
THA.LOC104799745 Tarenaya hassleriana HOM05D000062 ORTHO05D000043 4.1e-06 56.2 172 27.3
Aa31LG3G17460 Aethionema arabicum HOM05D000062 ORTHO05D000043 5.4e-06 55.8 169 25.4
BcaB01g05662 Brassica carinata HOM05D000062 ORTHO05D000043 5.4e-06 55.8 229 24.9
ClCG10G009780 Citrullus lanatus HOM05D000062 ORTHO05D000043 5.4e-06 55.8 172 27.9
VMungo0251G1022 Vigna mungo HOM05D000062 ORTHO05D000043 5.4e-06 55.8 172 27.3
Zm00001eb101990 Zea mays HOM05D000062 ORTHO05D000043 5.4e-06 55.8 234 24.8
arahy.Tifrunner.gnm1.ann1.3T7HHY Arachis hypogaea HOM05D000062 ORTHO05D000043 7.1e-06 55.5 236 25.4
arahy.Tifrunner.gnm1.ann1.XX30P2 Arachis hypogaea HOM05D000062 ORTHO05D000043 7.1e-06 55.5 236 25.4
Cre09.g393200 Chlamydomonas reinhardtii HOM05D000062 ORTHO05D000043 7.1e-06 55.5 196 28.1
Psat7g103280 Pisum sativum HOM05D000062 ORTHO05D000043 9.2e-06 55.1 172 26.7
PGR042G2214 Punica granatum HOM05D000062 ORTHO05D000043 9.2e-06 55.1 172 26.7
Sc18g0007170 Simmondsia chinensis HOM05D000062 ORTHO05D000043 9.2e-06 55.1 169 24.9
unitig_0.g892 Utricularia gibba HOM05D000062 ORTHO05D000043 9.2e-06 55.1 226 26.5
HPP92_018903 Vanilla planifolia HOM05D000062 ORTHO05D000043 9.2e-06 55.1 172 27.9
HPP92_018963 Vanilla planifolia HOM05D000062 ORTHO05D000043 9.2e-06 55.1 172 27.9


User provided reference genes

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