Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 0.0e+00 1322.0 702 100.0
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 0.0e+00 1234.9 703 94.6
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.9e-166 589.7 742 49.9
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.9e-162 577.0 730 50.8
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 8.8e-155 551.6 736 48.2
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 4.8e-153 545.8 729 48.3
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 1.0e-150 538.1 713 48.5
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 1.3e-150 537.7 719 47.7
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 6.5e-150 535.4 728 47.8
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 2.5e-149 533.5 725 48.1
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 2.8e-145 520.0 738 46.7
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 4.8e-145 519.2 820 43.9
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 1.1e-144 518.1 657 49.5
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 8.5e-142 508.4 730 45.6
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 3.6e-140 503.1 720 46.2
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 4.7e-140 502.7 731 46.6
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 8.0e-140 501.9 739 46.1
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 8.0e-140 501.9 690 47.8
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 3.9e-139 499.6 716 45.3
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 4.8e-137 492.7 723 45.2
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 6.3e-137 492.3 725 44.3
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 1.6e-135 487.6 725 46.2
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.0e-135 487.3 723 44.3
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 5.0e-134 482.6 739 44.2
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 8.5e-134 481.9 710 44.4
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.1e-133 481.5 725 44.1
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 1.9e-133 480.7 734 44.7
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 3.2e-133 479.9 712 44.0
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 4.2e-133 479.6 718 44.3
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 4.2e-133 479.6 728 44.5
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 7.2e-133 478.8 730 44.0
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 9.4e-133 478.4 693 45.9
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.0e-131 474.9 690 45.5
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 3.0e-131 473.4 729 45.0
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.0e-131 473.0 702 44.4
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.0e-131 473.0 699 44.2
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 5.2e-131 472.6 731 43.5
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 1.2e-130 471.5 730 42.9
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.5e-130 471.1 701 44.4
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 4.4e-130 469.5 720 43.9
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.3e-129 468.0 711 42.9
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.3e-129 468.0 732 43.3
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 3.7e-129 466.5 705 44.3
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.1e-128 463.4 724 42.3
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 5.3e-128 462.6 705 45.4
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.2e-127 461.5 719 46.2
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 1.7e-126 457.6 723 42.3
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 6.5e-126 455.7 737 42.6
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 1.5e-125 454.5 734 42.0
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 1.9e-125 454.1 735 43.9
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 2.5e-125 453.8 739 42.1
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 2.1e-124 450.7 735 42.3
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 2.7e-124 450.3 690 43.9
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 3.6e-124 449.9 696 42.0
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 4.7e-124 449.5 726 41.7
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 1.0e-123 448.4 707 45.4
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 8.8e-123 445.3 786 42.1
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 1.5e-122 444.5 702 42.3
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 4.4e-122 443.0 726 42.4
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 8.3e-121 438.7 731 41.7
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.4e-120 438.0 730 41.9
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.0e-119 434.1 699 41.6
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 2.1e-116 424.1 638 44.4
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 2.1e-116 424.1 691 42.0
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 8.0e-116 422.2 723 43.4
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.0e-115 421.8 725 43.0
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 1.8e-115 421.0 708 41.1
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 2.3e-115 420.6 712 42.6
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 3.0e-115 420.2 790 39.7
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 2.0e-114 417.5 741 42.1
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 4.4e-114 416.4 707 41.9
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 4.4e-114 416.4 772 39.5
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 9.8e-114 415.2 694 40.6
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.8e-113 413.7 726 42.6
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 6.3e-113 412.5 725 42.3
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 1.1e-112 411.8 731 41.3
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 1.1e-112 411.8 692 40.9
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.0e-112 409.1 741 42.1
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 9.2e-112 408.7 715 42.2
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 1.6e-111 407.9 721 39.9
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 2.7e-111 407.1 701 40.8
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 7.8e-111 405.6 787 38.5
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.8e-111 405.6 717 43.2
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 1.0e-110 405.2 702 42.2
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 1.1e-109 401.7 721 40.5
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.6e-109 399.4 706 39.9
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 1.6e-108 397.9 735 40.5
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.0e-107 395.2 639 42.7
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 5.8e-106 389.4 725 37.9
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 9.8e-106 388.7 847 36.1
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 1.7e-105 387.9 705 40.7
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 3.7e-105 386.7 694 41.8
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 1.9e-104 384.4 734 38.7
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 3.2e-104 383.6 746 38.7
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 7.0e-104 382.5 637 41.8
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.0e-102 378.6 783 36.4
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 1.3e-102 378.3 522 46.6
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 5.0e-102 376.3 801 36.2
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 8.6e-102 375.6 728 38.5
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 8.6e-102 375.6 674 40.8
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 1.6e-100 371.3 883 35.2
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 3.1e-99 367.1 626 40.7
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 4.4e-98 363.2 721 38.1
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 1.4e-96 358.2 634 40.7
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 1.4e-96 358.2 696 38.1
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 7.0e-96 355.9 716 36.2
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 3.0e-94 350.5 602 41.0
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.0e-94 350.5 548 45.3
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 6.6e-94 349.4 739 37.6
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 8.6e-94 349.0 672 38.5
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 2.5e-93 347.4 695 37.6
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.7e-92 343.2 323 60.4
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 6.8e-91 339.3 729 36.5
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 1.5e-90 338.2 688 37.1
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 2.0e-90 337.8 669 38.4
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 2.6e-90 337.4 600 40.3
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 1.7e-89 334.7 689 36.7
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 3.7e-89 333.6 702 36.0
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 4.9e-89 333.2 663 37.7
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.1e-88 332.0 645 38.9
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 4.1e-88 330.1 386 48.7
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 7.1e-88 329.3 300 58.3
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 4.6e-87 326.6 719 35.3
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 6.0e-87 326.2 651 37.0
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.3e-86 325.1 715 36.4
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 1.3e-86 325.1 689 36.1
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 3.9e-86 323.6 696 36.4
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 5.1e-86 323.2 686 36.6
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 6.6e-86 322.8 688 35.9
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 2.5e-85 320.9 687 36.2
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 9.5e-85 318.9 680 37.2
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 2.1e-84 317.8 681 36.0
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 1.8e-83 314.7 684 35.4
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 2.6e-82 310.8 689 35.4
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 4.9e-81 306.6 683 35.1
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 7.1e-80 302.8 720 36.0
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 9.2e-80 302.4 694 34.4
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 7.8e-79 299.3 690 34.1
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 1.0e-78 298.9 576 39.1
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 2.3e-78 297.7 575 37.9
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.6e-77 293.1 403 43.9
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 6.9e-75 286.2 500 41.0
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 4.9e-73 280.0 258 58.5
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 1.4e-72 278.5 636 35.5
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.9e-72 278.1 300 53.0
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 6.2e-68 263.1 702 36.0
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 3.1e-67 260.8 256 56.2
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 1.2e-66 258.8 277 51.3
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.1e-64 252.3 281 51.2
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.1e-64 252.3 244 52.9
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 1.3e-60 238.8 639 31.9
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 1.7e-57 228.4 272 45.6
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 3.2e-48 197.6 503 36.0
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 9.3e-48 196.1 144 70.1
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 2.6e-42 177.9 750 29.5
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 6.5e-41 173.3 146 59.6
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 1.4e-40 172.2 463 36.5
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 9.4e-40 169.5 221 49.8
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 2.7e-39 167.9 446 36.1
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 5.1e-38 163.7 174 52.3
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.6e-31 142.1 112 60.7
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.0e-30 139.4 313 36.4
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.8e-30 138.7 210 39.0
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 5.3e-27 127.1 348 29.9
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.1e-24 119.4 139 53.2
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.4e-21 107.5 111 57.7
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 1.1e-19 102.8 113 56.6
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 9.1e-19 99.8 451 29.5
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.4e-11 75.1 67 58.2
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 1.6e-10 72.4 454 25.6
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 2.0e-10 72.0 74 50.0
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.9e-09 68.2 66 51.5
FAN06G0571 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.0e-09 67.4 87 48.3
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.5e-08 65.9 52 61.5
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 7.2e-08 63.5 96 38.5
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 2.1e-07 62.0 157 29.3
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.4e-06 59.3 203 31.0
CBR_g49744 Chara braunii HOM05D000019 ORTHO05D000002 8.8e-06 56.6 55 47.3


User provided reference genes

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