Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 6.5e-296 1020.0 528 100.0
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 2.4e-237 825.5 445 96.2
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 1.7e-131 473.8 449 57.5
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 6.2e-129 465.3 437 57.0
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 3.1e-128 463.0 445 56.2
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 1.1e-125 454.5 436 55.3
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 6.0e-124 448.7 445 54.2
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 3.0e-123 446.4 446 54.3
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 2.5e-122 443.4 447 54.6
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 1.3e-121 441.0 445 52.8
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 4.8e-121 439.1 447 54.8
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 1.1e-120 438.0 440 54.5
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 2.4e-120 436.8 439 55.1
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 1.2e-119 434.5 437 53.3
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 7.6e-119 431.8 439 53.8
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 7.6e-119 431.8 439 53.8
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 1.3e-118 431.0 437 52.9
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 1.3e-118 431.0 447 53.5
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 2.4e-117 426.8 475 51.6
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 1.2e-116 424.5 475 51.4
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 1.2e-116 424.5 435 52.2
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 2.3e-115 420.2 441 52.6
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 3.0e-115 419.9 438 52.3
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 6.7e-115 418.7 440 51.8
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 1.5e-114 417.5 463 50.3
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 1.9e-114 417.2 438 51.8
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 9.6e-114 414.8 434 51.8
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 2.1e-113 413.7 435 53.6
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 3.7e-113 412.9 438 50.9
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 1.1e-112 411.4 442 50.0
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 3.1e-112 409.8 434 52.1
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 3.1e-112 409.8 434 52.1
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 3.1e-112 409.8 434 52.1
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 3.1e-112 409.8 444 50.5
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 9.0e-112 408.3 446 50.9
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 1.2e-111 407.9 448 50.7
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 1.5e-111 407.5 435 51.3
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 8.4e-110 401.7 434 51.4
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 1.4e-109 401.0 443 50.8
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 1.9e-109 400.6 411 54.0
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 3.2e-109 399.8 434 51.4
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 1.6e-108 397.5 445 51.0
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 7.9e-108 395.2 444 51.8
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 7.9e-108 395.2 448 49.3
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.0e-107 394.8 448 50.0
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 1.0e-107 394.8 448 49.1
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 1.8e-107 394.0 449 50.1
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 1.8e-107 394.0 445 50.8
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 2.3e-107 393.7 447 50.8
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.3e-107 393.7 445 49.0
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.9e-107 392.9 444 50.0
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 6.7e-107 392.1 456 49.1
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 8.7e-107 391.7 443 50.3
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.1e-106 391.3 448 49.1
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.5e-106 390.2 440 50.0
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 2.5e-106 390.2 333 62.2
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 9.6e-106 388.3 438 51.4
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 6.2e-105 385.6 446 49.1
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 8.2e-105 385.2 447 48.3
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 5.3e-104 382.5 435 48.0
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 9.0e-104 381.7 431 50.1
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 9.0e-104 381.7 439 50.6
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 1.2e-103 381.3 447 49.4
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 1.2e-103 381.3 444 48.2
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 1.2e-103 381.3 438 50.7
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 2.0e-103 380.6 443 49.7
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 2.6e-103 380.2 449 50.3
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 4.5e-103 379.4 447 47.2
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 5.8e-103 379.0 443 47.6
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 2.9e-102 376.7 440 49.8
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 8.4e-102 375.2 415 50.1
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 2.5e-101 373.6 429 48.5
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 3.2e-101 373.2 415 51.8
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 4.2e-101 372.9 446 47.3
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 3.9e-99 366.3 414 51.0
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 5.1e-99 365.9 444 48.6
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 3.3e-98 363.2 437 46.5
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 2.4e-96 357.1 434 48.6
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 3.1e-96 356.7 363 52.1
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 4.1e-96 356.3 445 47.0
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 4.5e-95 352.8 418 48.6
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 1.9e-93 347.4 402 46.5
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 1.0e-91 341.7 402 49.8
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 2.3e-91 340.5 402 49.8
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 1.3e-89 334.7 575 37.9
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.0e-83 315.1 350 50.9
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 3.0e-83 313.5 433 45.7
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 1.5e-77 294.7 440 42.5
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 3.8e-70 270.0 436 41.3
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 9.4e-69 265.4 532 35.0
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 6.8e-67 259.2 258 54.3
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 1.4e-64 251.5 333 43.8
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 8.0e-60 235.7 205 59.5
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 5.7e-58 229.6 207 56.5
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 1.4e-51 208.4 203 52.2
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 2.3e-51 207.6 427 36.8
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 2.2e-41 174.5 436 29.6
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 1.6e-39 168.3 122 68.9
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 4.3e-37 160.2 484 25.8
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 1.2e-34 152.1 253 40.7
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 1.2e-34 152.1 301 35.2
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 2.7e-31 141.0 115 62.6
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 1.1e-29 135.6 424 29.7
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 1.6e-28 131.7 183 45.4
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 1.7e-22 111.7 424 27.4
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 3.0e-22 110.9 113 56.6
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 3.3e-21 107.5 227 35.7
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 1.1e-19 102.4 157 41.4
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 1.2e-18 99.0 177 39.0
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 2.6e-18 97.8 109 49.5
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 7.6e-18 96.3 144 41.0
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 1.9e-16 91.7 151 39.1
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 8.7e-14 82.8 96 50.0
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 9.0e-11 72.8 75 48.0
MCO13G538 Micromonas commoda HOM05D006594 ORTHO05D008383 9.3e-08 62.8 443 19.9
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 9.3e-08 62.8 121 28.9


User provided reference genes

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