Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3181 Papaver somniferum HOM05D015264 ORTHO05D013620 3.0e-87 325.1 160 100.0
PSO339G5938 Papaver somniferum HOM05D019271 ORTHO05D013620 9.0e-15 84.3 138 34.1
PSO478G2128 Papaver somniferum HOM05D019271 ORTHO05D013620 2.6e-14 82.8 155 31.0
PSO210G3837 Papaver somniferum HOM05D019271 ORTHO05D013620 7.6e-14 81.3 116 37.1
PSO339G0554 Papaver somniferum HOM05D019271 ORTHO05D013620 8.4e-13 77.8 145 31.0
PSO675G4711 Papaver somniferum HOM05D015264 ORTHO05D013620 1.4e-12 77.0 123 33.3
PSO063G5666 Papaver somniferum HOM05D015264 ORTHO05D013620 1.9e-12 76.6 123 31.7
CiPaw.13G129900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.6e-11 73.6 119 33.6
CiPaw.03G043000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-11 72.8 119 32.8
CiPaw.07G052000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-11 72.8 119 32.8
CiPaw.08G044500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-11 72.8 119 32.8
CiPaw.09G172800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-11 72.8 119 32.8
CiPaw.10G012800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-11 72.8 119 32.8
CiPaw.14G032000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-11 72.8 119 32.8
PSO601G0020 Papaver somniferum HOM05D015264 ORTHO05D013620 6.1e-11 71.6 123 33.3
PSO133G0036 Papaver somniferum HOM05D015264 ORTHO05D013620 7.9e-11 71.2 123 30.9
CiPaw.02G091600 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.3e-10 70.5 119 31.9
CiPaw.07G048000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-10 70.1 119 31.9
CiPaw.11G197100 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-10 70.1 119 31.9
CiPaw.14G108500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-10 70.1 119 31.9
CiPaw.01G283500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.3e-10 69.7 119 31.9
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.3e-10 69.7 114 30.7
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.3e-10 69.7 114 30.7
CiPaw.14G029000 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.0e-10 69.3 146 28.8
CiPaw.14G032300 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.0e-10 69.3 119 31.9
Os12g0169300 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 3.9e-10 68.9 167 28.1
Os12g0228500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 3.9e-10 68.9 167 28.1
Zm00001eb138070 Zea mays HOM05D001576 ORTHO05D000401 3.9e-10 68.9 140 31.4
CiPaw.08G115400 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.1e-10 68.6 119 31.9
CiPaw.01G183400 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.7e-10 68.2 119 32.8
CiPaw.01G092600 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.7e-10 67.8 119 30.3
CiPaw.01G146900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-09 67.4 119 31.1
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 1.9e-09 66.6 131 29.8
CiPaw.01G075100 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.3e-09 65.5 119 30.3
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 5.7e-09 65.1 114 31.6
CiPaw.11G142700 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.4e-09 64.7 92 37.0
Rhsim01G0041500 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.4e-09 64.7 127 30.7
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 7.4e-09 64.7 109 32.1
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.7e-09 64.3 114 30.7
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.7e-09 64.3 114 30.7
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.7e-09 64.3 114 30.7
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.7e-09 64.3 114 30.7
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.7e-09 64.3 146 26.0
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 9.7e-09 64.3 109 32.1
TWI77G0630 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 1.3e-08 63.9 105 30.5
CiPaw.15G112900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.6e-08 63.5 120 30.0
CiPaw.15G067200 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.8e-08 62.8 146 26.7
CiPaw.04G176500 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.7e-08 62.4 92 35.9
FvH4_3g26413 Fragaria vesca HOM05D001576 ORTHO05D000401 3.7e-08 62.4 121 28.1
Rhsim03G0149900 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.7e-08 62.4 127 29.9
CiPaw.14G077500 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.2e-08 61.2 92 33.7
CiPaw.14G121300 Carya illinoinensis HOM05D001576 ORTHO05D010219 8.2e-08 61.2 119 31.1
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 8.2e-08 61.2 118 28.0
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 8.2e-08 61.2 118 27.1
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 8.2e-08 61.2 119 27.7
CiPaw.07G147000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-07 60.8 120 29.2
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.1e-07 60.8 100 32.0
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.1e-07 60.8 100 32.0
Rhsim07G0047500 Rhododendron simsii HOM05D009487 ORTHO05D011434 1.1e-07 60.8 90 32.2
AUR62014746 Chenopodium quinoa HOM05D000219 ORTHO05D004649 1.4e-07 60.5 124 31.5
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.4e-07 60.5 100 32.0
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 1.8e-07 60.1 136 25.7
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 2.4e-07 59.7 101 30.7
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 2.4e-07 59.7 121 29.8
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 2.4e-07 59.7 121 29.8
CiPaw.01G097200 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.1e-07 59.3 96 34.4
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 3.1e-07 59.3 136 25.7
Medtr3g464310 Medicago truncatula HOM05D006550 ORTHO05D008630 3.1e-07 59.3 97 29.9
Medtr6g016670 Medicago truncatula HOM05D006550 ORTHO05D008630 3.1e-07 59.3 97 29.9
Medtr7g461350 Medicago truncatula HOM05D006550 ORTHO05D008630 3.1e-07 59.3 97 29.9
Medtr1g100375 Medicago truncatula HOM05D006550 ORTHO05D008630 4.1e-07 58.9 97 29.9
Medtr1g471070 Medicago truncatula HOM05D006550 ORTHO05D008630 4.1e-07 58.9 97 29.9
Medtr2g072860 Medicago truncatula HOM05D006550 ORTHO05D008630 4.1e-07 58.9 97 29.9
Medtr3g450670 Medicago truncatula HOM05D006550 ORTHO05D008630 4.1e-07 58.9 97 29.9
Medtr3g464170 Medicago truncatula HOM05D006550 ORTHO05D008630 4.1e-07 58.9 97 29.9
Medtr6g051405 Medicago truncatula HOM05D006550 ORTHO05D008630 4.1e-07 58.9 97 29.9
Os06g0635500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 4.1e-07 58.9 91 31.9
QL06p053821 Quercus lobata HOM05D001576 ORTHO05D000401 4.1e-07 58.9 116 25.9
SGA_v2.0_scaffold309G48177 Striga asiatica HOM05D001576 ORTHO05D000401 4.1e-07 58.9 115 28.7
CiPaw.07G099700 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.3e-07 58.5 112 32.1
QL05p011416 Quercus lobata HOM05D001576 ORTHO05D016378 5.3e-07 58.5 100 31.0
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.9e-07 58.2 114 28.9
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 6.9e-07 58.2 95 31.6
CiPaw.14G018900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-06 57.4 92 33.7
CiPaw.15G155400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-06 57.4 101 33.7
SGA_v2.0_scaffold260G45865 Striga asiatica HOM05D001576 ORTHO05D000401 1.2e-06 57.4 115 27.8
CiPaw.10G126200 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.5e-06 57.0 154 27.9
Rhsim04G0125600 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.5e-06 57.0 91 31.9
Zm00001eb167560 Zea mays HOM05D001576 ORTHO05D000401 1.5e-06 57.0 91 28.6
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 2.0e-06 56.6 121 29.8
Zm00001eb283200 Zea mays HOM05D000011 ORTHO05D000157 2.0e-06 56.6 144 21.5
TWI53G0863 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.6e-06 56.2 120 24.2
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 3.4e-06 55.8 108 27.8
TWI53G1133 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.4e-06 55.8 118 26.3
CARHR054710 Cardamine hirsuta HOM05D006550 ORTHO05D008630 4.5e-06 55.5 121 26.4
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 4.5e-06 55.5 151 22.5
Prupe.1G172500 Prunus persica HOM05D001576 ORTHO05D000401 4.5e-06 55.5 137 28.5
RhsimUnG0137500 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.5e-06 55.5 164 27.4
TWI23G0314 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 5.9e-06 55.1 162 25.9
BcaC01g01358 Brassica carinata HOM05D000589 ORTHO05D000401 7.7e-06 54.7 109 29.4
Haze_00879 Corylus avellana HOM05D001311 ORTHO05D001204 7.7e-06 54.7 92 33.7
FAN14G0954 Fragaria x ananassa HOM05D001576 ORTHO05D000401 7.7e-06 54.7 91 29.7
TWI34G1527 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.0e-05 54.3 127 27.6
TWI74G0837 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.0e-05 54.3 127 27.6


User provided reference genes

Program Settings