Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3049 Papaver somniferum HOM05D004299 ORTHO05D003557 0.0e+00 1825.1 1069 100.0
PSO478G4400 Papaver somniferum HOM05D018639 ORTHO05D003557 6.8e-50 203.8 1155 26.4
PSO017G1908 Papaver somniferum HOM05D004299 ORTHO05D003557 3.8e-32 144.8 1145 26.4
PSO782G5567 Papaver somniferum HOM05D018639 ORTHO05D003557 2.4e-26 125.6 253 39.5
PSO063G4917 Papaver somniferum HOM05D018639 ORTHO05D003557 2.6e-25 122.1 251 39.8
PSO675G1109 Papaver somniferum HOM05D018639 ORTHO05D037265 7.9e-14 84.0 851 22.1
PSO017G5744 Papaver somniferum HOM05D018639 ORTHO05D003557 2.5e-12 79.0 850 21.6
Sabra19G0058100 Salix brachista HOM05D004299 ORTHO05D003557 4.3e-12 78.2 203 32.5
Lj3g0021850 Lotus japonicus HOM05D004299 ORTHO05D003557 1.4e-10 73.2 73 53.4
RcHm_v2.0_Chr1g0383881 Rosa chinensis HOM05D012506 ORTHO05D003557 3.1e-10 72.0 107 45.8
Ca_04929_v3 Cicer arietinum L. HOM05D004299 ORTHO05D003557 4.0e-10 71.6 72 55.6
Manes.09G124200 Manihot esculenta HOM05D004299 ORTHO05D003557 5.3e-10 71.2 161 35.4
Aqoxy3G02070 Aquilegia oxysepala HOM05D004299 ORTHO05D003557 6.9e-10 70.9 115 40.0
PSO541G1500 Papaver somniferum HOM05D018639 ORTHO05D037265 6.9e-10 70.9 105 48.6
Sabra13G0071500 Salix brachista HOM05D004299 ORTHO05D003557 9.0e-10 70.5 153 36.6
Sed0018309 Sechium edule HOM05D004299 ORTHO05D003557 9.0e-10 70.5 87 43.7
Aa31LG5G13610 Aethionema arabicum HOM05D004299 ORTHO05D003557 1.2e-09 70.1 69 53.6
Potri.019G046801 Populus trichocarpa HOM05D004299 ORTHO05D003557 1.2e-09 70.1 153 35.9
TPR.G8414 Trifolium pratense HOM05D004299 ORTHO05D003557 1.5e-09 69.7 72 52.8
arahy.Tifrunner.gnm1.ann1.KHZX7Q Arachis hypogaea HOM05D004299 ORTHO05D003557 2.6e-09 68.9 87 46.0
arahy.Tifrunner.gnm1.ann1.R3QID6 Arachis hypogaea HOM05D004299 ORTHO05D003557 2.6e-09 68.9 94 46.8
Cpa.g.sc39.57 Carica papaya HOM05D004299 ORTHO05D003557 2.6e-09 68.9 103 43.7
DCAR_014573 Daucus carota HOM05D004299 ORTHO05D003557 2.6e-09 68.9 94 45.7
Manes.08G164200 Manihot esculenta HOM05D004299 ORTHO05D003557 4.5e-09 68.2 76 52.6
Nn1g01977 Nelumbo nucifera HOM05D004299 ORTHO05D003557 4.5e-09 68.2 101 47.5
Potri.013G081600 Populus trichocarpa HOM05D004299 ORTHO05D003557 4.5e-09 68.2 95 41.1
ClCG01G005040 Citrullus lanatus HOM05D013728 ORTHO05D003557 5.8e-09 67.8 58 55.2
BcaB01g05216 Brassica carinata HOM05D004299 ORTHO05D003557 7.6e-09 67.4 86 46.5
Ciclev10023566m.g Citrus clementina HOM05D004299 ORTHO05D003557 7.6e-09 67.4 76 52.6
Eucgr.G02658 Eucalyptus grandis HOM05D004299 ORTHO05D003557 1.0e-08 67.0 154 34.4
MD07G1306000 Malus domestica HOM05D004299 ORTHO05D003557 1.3e-08 66.6 111 35.1
PSO017G4482 Papaver somniferum HOM05D018639 ORTHO05D037265 1.7e-08 66.2 175 29.7
Atru.chr12.1996 Acer truncatum HOM05D004299 ORTHO05D003557 2.2e-08 65.9 225 28.9
BcaB01g04949 Brassica carinata HOM05D004299 ORTHO05D003557 2.2e-08 65.9 93 45.2
Hund21092 Selenicereus undatus HOM05D004299 ORTHO05D003557 2.2e-08 65.9 76 48.7
Duzib106G1502 Durio zibethinus HOM05D004299 ORTHO05D003557 2.9e-08 65.5 98 42.9
TAR374G0649 Trochodendron aralioides HOM05D004299 ORTHO05D003557 2.9e-08 65.5 61 57.4
Nitab4.5_0005081g0100 Nicotiana tabacum HOM05D004299 ORTHO05D003557 3.8e-08 65.1 43 72.1
CsaV3_5G015680 Cucumis sativus L. HOM05D004299 ORTHO05D003557 4.9e-08 64.7 58 53.4
FvH4_7g33621 Fragaria vesca HOM05D012506 ORTHO05D003557 4.9e-08 64.7 59 57.6
FAN01G2289 Fragaria x ananassa HOM05D012506 ORTHO05D003557 4.9e-08 64.7 59 57.6
TAR374G1619 Trochodendron aralioides HOM05D004299 ORTHO05D003557 4.9e-08 64.7 169 36.1
EL10Ac3g05093 Beta vulgaris HOM05D022644 ORTHO05D003557 6.5e-08 64.3 69 52.2
BcaC03g18533 Brassica carinata HOM05D004299 ORTHO05D003557 6.5e-08 64.3 43 69.8
A06p26270 Brassica napus HOM05D004299 ORTHO05D003557 6.5e-08 64.3 59 57.6
BNapus_Darmor_BZH_scaffold_162p00030 Brassica napus HOM05D004299 ORTHO05D003557 6.5e-08 64.3 59 57.6
BNapus_Darmor_BZH_scaffold_78p00020 Brassica napus HOM05D004299 ORTHO05D003557 6.5e-08 64.3 59 57.6
C02p08770 Brassica napus HOM05D004299 ORTHO05D003557 6.5e-08 64.3 86 46.5
BolC1t05844H Brassica oleracea HOM05D004299 ORTHO05D003557 6.5e-08 64.3 59 57.6
BolC2t06791H Brassica oleracea HOM05D004299 ORTHO05D003557 6.5e-08 64.3 43 69.8
BraA01t04590Z Brassica rapa HOM05D004299 ORTHO05D003557 6.5e-08 64.3 59 57.6
BraA02t05360Z Brassica rapa HOM05D004299 ORTHO05D003557 6.5e-08 64.3 95 44.2
COL.COLO4_06387 Corchorus olitorius HOM05D004299 ORTHO05D003557 6.5e-08 64.3 97 43.3
Thhalv10013127m.g Eutrema salsugineum HOM05D004299 ORTHO05D003557 6.5e-08 64.3 86 46.5
Nitab4.5_0000115g0360 Nicotiana tabacum HOM05D004299 ORTHO05D003557 6.5e-08 64.3 43 72.1
Sp6g27070 Schrenkiella parvula HOM05D004299 ORTHO05D003557 6.5e-08 64.3 99 43.4
TWI34G1775 Tripterygium wilfordii HOM05D004299 ORTHO05D003557 6.5e-08 64.3 132 39.4
AL6G28200 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 8.4e-08 63.9 43 69.8
AT5G17160 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 8.4e-08 63.9 72 51.4
CARHR196070 Cardamine hirsuta HOM05D004299 ORTHO05D003557 8.4e-08 63.9 72 50.0
FAN10G0189 Fragaria x ananassa HOM05D012506 ORTHO05D003557 8.4e-08 63.9 229 29.7
Glyma.12G018900 Glycine max HOM05D004299 ORTHO05D003557 8.4e-08 63.9 72 48.6
Psat7g171480 Pisum sativum HOM05D004299 ORTHO05D003557 8.4e-08 63.9 42 69.0
PGR042G3162 Punica granatum HOM05D004299 ORTHO05D003557 8.4e-08 63.9 96 45.8
BcaB08g36802 Brassica carinata HOM05D004299 ORTHO05D003557 1.1e-07 63.5 58 56.9
CSS0010494 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 1.1e-07 63.5 43 69.8
CSS0016343 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 1.1e-07 63.5 43 69.8
Carub.0006s1534 Capsella rubella HOM05D004299 ORTHO05D003557 1.1e-07 63.5 89 43.8
FAN10G3788 Fragaria x ananassa HOM05D012506 ORTHO05D003557 1.1e-07 63.5 59 55.9
Gohir.D08G243500 Gossypium hirsutum HOM05D004299 ORTHO05D003557 1.1e-07 63.5 178 30.3
Gorai.004G259400 Gossypium raimondii HOM05D004299 ORTHO05D003557 1.1e-07 63.5 178 30.3
Lalb_Chr16g0376621 Lupinus albus HOM05D004299 ORTHO05D003557 1.1e-07 63.5 129 36.4
MBI04_g44838_MAGBIO Magnolia biondii HOM05D027374 ORTHO05D030041 1.1e-07 63.5 91 45.1
QL09p025753 Quercus lobata HOM05D004299 ORTHO05D003557 1.1e-07 63.5 172 33.1
Sopen06g029190 Solanum pennellii HOM05D004299 ORTHO05D003557 1.1e-07 63.5 43 72.1
BraA03t10142Z Brassica rapa HOM05D004299 ORTHO05D003557 1.4e-07 63.2 43 69.8
CiPaw.05G237300 Carya illinoinensis HOM05D004299 ORTHO05D003557 1.4e-07 63.2 160 33.8
Haze_00596 Corylus avellana HOM05D004299 ORTHO05D003557 1.4e-07 63.2 99 43.4
Migut.F00952 Erythranthe guttata HOM05D004299 ORTHO05D003557 1.4e-07 63.2 43 69.8
Lalb_Chr01g0001001 Lupinus albus HOM05D004299 ORTHO05D003557 1.4e-07 63.2 43 67.4
Sed0000182 Sechium edule HOM05D004299 ORTHO05D003557 1.4e-07 63.2 80 46.2
Sc19g0000210 Simmondsia chinensis HOM05D004299 ORTHO05D003557 1.4e-07 63.2 43 72.1
GSVIVG01024444001 Vitis vinifera HOM05D004299 ORTHO05D003557 1.4e-07 63.2 43 72.1
A03p08220 Brassica napus HOM05D004299 ORTHO05D003557 1.9e-07 62.8 94 43.6
C03p60040 Brassica napus HOM05D004299 ORTHO05D003557 1.9e-07 62.8 43 67.4
BolC3t13447H Brassica oleracea HOM05D004299 ORTHO05D003557 1.9e-07 62.8 87 46.0
BolC3t18269H Brassica oleracea HOM05D004299 ORTHO05D003557 1.9e-07 62.8 43 67.4
Duzib128G1020 Durio zibethinus HOM05D004299 ORTHO05D003557 1.9e-07 62.8 76 48.7
Glyma.11G092600 Glycine max HOM05D004299 ORTHO05D003557 1.9e-07 62.8 261 28.0
Phvul.011G021300 Phaseolus vulgaris HOM05D004299 ORTHO05D003557 1.9e-07 62.8 43 67.4
BcaC01g02808 Brassica carinata HOM05D004299 ORTHO05D003557 2.5e-07 62.4 240 26.7
Cfa015894 Carpinus fangiana HOM05D004299 ORTHO05D003557 2.5e-07 62.4 43 69.8
MELO3C005430.2 Cucumis melo HOM05D013728 ORTHO05D003557 2.5e-07 62.4 80 46.2
CsaV3_5G005290 Cucumis sativus L. HOM05D013728 ORTHO05D003557 2.5e-07 62.4 58 51.7
Dinv29171 Davidia involucrata HOM05D004299 ORTHO05D003557 2.5e-07 62.4 69 46.4
Medtr4g077590 Medicago truncatula HOM05D004299 ORTHO05D003557 2.5e-07 62.4 72 50.0
Peaxi162Scf00815g00349 Petunia axillaris HOM05D004299 ORTHO05D003557 2.5e-07 62.4 43 69.8
Prupe.2G324100 Prunus persica HOM05D004299 ORTHO05D003557 2.5e-07 62.4 103 40.8
PGSC0003DMG400026934 Solanum tuberosum HOM05D004299 ORTHO05D003557 2.5e-07 62.4 43 69.8
Actinidia34301 Actinidia chinensis HOM05D004299 ORTHO05D003557 3.2e-07 62.0 43 67.4
C03p09520 Brassica napus HOM05D004299 ORTHO05D003557 3.2e-07 62.0 86 46.5
Oeu061066.1 Olea europaea HOM05D004299 ORTHO05D003557 3.2e-07 62.0 43 69.8
Solyc06g072810.4 Solanum lycopersicum HOM05D004299 ORTHO05D003557 3.2e-07 62.0 43 69.8
ECA247G1921 Erigeron canadensis HOM05D004299 ORTHO05D003557 4.2e-07 61.6 151 31.8
Gohir.A08G223300 Gossypium hirsutum HOM05D004299 ORTHO05D003557 4.2e-07 61.6 181 30.9
HanXRQChr17g0554401 Helianthus annuus HOM05D004299 ORTHO05D003557 4.2e-07 61.6 88 44.3
Hma1.2p1_0758F.1_g213620 Hydrangea macrophylla HOM05D004299 ORTHO05D003557 5.5e-07 61.2 103 37.9
Nitab4.5_0000021g0310 Nicotiana tabacum HOM05D004299 ORTHO05D003557 5.5e-07 61.2 43 69.8
SalBow2G2429 Salvia bowleyana HOM05D004299 ORTHO05D003557 5.5e-07 61.2 43 67.4
Thecc.05G208300 Theobroma cacao HOM05D004299 ORTHO05D003557 5.5e-07 61.2 97 40.2
unitig_52.g17695 Utricularia gibba HOM05D004299 ORTHO05D003557 5.5e-07 61.2 97 43.3
FAN03G0789 Fragaria x ananassa HOM05D012506 ORTHO05D003557 7.1e-07 60.8 59 55.9
MD01G1233900 Malus domestica HOM05D004299 ORTHO05D003557 7.1e-07 60.8 110 33.6
Nn3g19291 Nelumbo nucifera HOM05D004299 ORTHO05D003557 7.1e-07 60.8 65 50.8
VMungo1127G2117 Vigna mungo HOM05D004299 ORTHO05D003557 7.1e-07 60.8 43 65.1
Zm00001eb430160 Zea mays HOM05D033178 ORTHO05D037852 7.1e-07 60.8 94 36.2
Carub.0003s0228 Capsella rubella HOM05D004299 ORTHO05D003557 9.3e-07 60.5 75 46.7
Lsat_1_v5_gn_8_135240 Lactuca sativa HOM05D004299 ORTHO05D003557 9.3e-07 60.5 43 67.4
Lalb_Chr09g0320301 Lupinus albus HOM05D004299 ORTHO05D003557 9.3e-07 60.5 43 69.8
Nitab4.5_0002193g0040 Nicotiana tabacum HOM05D004299 ORTHO05D003557 9.3e-07 60.5 43 67.4
Rhsim03G0220700 Rhododendron simsii HOM05D004299 ORTHO05D003557 9.3e-07 60.5 77 48.1
THA.LOC104802916 Tarenaya hassleriana HOM05D004299 ORTHO05D003557 9.3e-07 60.5 43 67.4
vmacro06502 Vaccinium macrocarpon HOM05D004299 ORTHO05D003557 9.3e-07 60.5 43 65.1
AT3G03130 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 1.2e-06 60.1 43 62.8
MSTRG.13 Avicennia marina HOM05D004299 ORTHO05D003557 1.2e-06 60.1 43 67.4
Sp3g02170 Schrenkiella parvula HOM05D004299 ORTHO05D003557 1.2e-06 60.1 43 62.8
CANSAT35G1347 Cannabis sativa HOM05D004299 ORTHO05D003557 1.6e-06 59.7 44 68.2
Peaxi162Scf00745g00852 Petunia axillaris HOM05D004299 ORTHO05D003557 1.6e-06 59.7 43 65.1
Ah.04g157210 Amaranthus hybridus HOM05D022644 ORTHO05D003557 2.1e-06 59.3 89 41.6
SalBow4G2051 Salvia bowleyana HOM05D004299 ORTHO05D003557 2.1e-06 59.3 184 25.5
BcaC04g18829 Brassica carinata HOM05D004299 ORTHO05D003557 2.7e-06 58.9 59 54.2
A02p03950 Brassica napus HOM05D004299 ORTHO05D003557 3.5e-06 58.5 480 24.6
CARHR077150 Cardamine hirsuta HOM05D004299 ORTHO05D003557 3.5e-06 58.5 81 42.0
Os04g0597900 Oryza sativa ssp. japonica HOM05D021310 ORTHO05D003557 3.5e-06 58.5 43 60.5
Zm00001eb063140 Zea mays HOM05D021310 ORTHO05D003557 3.5e-06 58.5 50 56.0
AL3G12740 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 4.6e-06 58.2 43 60.5
Cc02_g00400 Coffea canephora HOM05D004299 ORTHO05D003557 6.0e-06 57.8 43 60.5
Zm00001eb188050 Zea mays HOM05D021310 ORTHO05D003557 6.0e-06 57.8 46 56.5
Zm00001eb251590 Zea mays HOM05D021310 ORTHO05D003557 6.0e-06 57.8 46 56.5
AUR62005909 Chenopodium quinoa HOM05D022644 ORTHO05D003557 7.9e-06 57.4 73 46.6


User provided reference genes

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