Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2895 Papaver somniferum HOM05D002890 ORTHO05D005855 0.0e+00 2492.6 1353 100.0
PSO017G2731 Papaver somniferum HOM05D002890 ORTHO05D005855 0.0e+00 2390.5 1354 92.9
TAR381G0565 Trochodendron aralioides HOM05D002890 ORTHO05D005855 9.6e-267 924.5 1325 47.2
TAR629G0274 Trochodendron aralioides HOM05D002890 ORTHO05D005855 6.0e-253 878.6 1342 45.7
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 5.9e-224 782.3 1311 43.3
GSVIVG01012724001 Vitis vinifera HOM05D002890 ORTHO05D005855 1.7e-215 754.2 1210 45.1
Aqoxy1G00468 Aquilegia oxysepala HOM05D002890 ORTHO05D005855 2.2e-215 753.8 1267 43.0
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 2.2e-215 753.8 1371 41.3
Dinv13894 Davidia involucrata HOM05D002890 ORTHO05D005855 3.2e-214 750.0 1291 42.8
CSS0042685 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D005855 4.5e-208 729.6 1243 42.5
Gohir.A10G012660 Gossypium hirsutum HOM05D002890 ORTHO05D005855 4.5e-208 729.6 1309 41.4
Gorai.011G014000 Gossypium raimondii HOM05D002890 ORTHO05D005855 7.7e-208 728.8 1304 41.6
Gohir.D10G012400 Gossypium hirsutum HOM05D002890 ORTHO05D005855 5.0e-207 726.1 1304 41.5
Haze_06800 Corylus avellana HOM05D002890 ORTHO05D005855 1.5e-206 724.5 1403 40.0
CiPaw.09G092000 Carya illinoinensis HOM05D002890 ORTHO05D005855 1.9e-206 724.2 1319 43.2
Potri.011G003500 Populus trichocarpa HOM05D002890 ORTHO05D005855 1.9e-206 724.2 1289 41.4
Duzib192G0355 Durio zibethinus HOM05D002890 ORTHO05D005855 5.5e-206 722.6 1310 42.1
Manes.17G038900 Manihot esculenta HOM05D002890 ORTHO05D005855 4.0e-204 716.5 1249 42.2
Thecc.06G220400 Theobroma cacao HOM05D002890 ORTHO05D005855 1.1e-201 708.4 1293 41.1
QL03p063516 Quercus lobata HOM05D002890 ORTHO05D005855 1.8e-201 707.6 1391 41.1
QL03p063938 Quercus lobata HOM05D002890 ORTHO05D005855 1.0e-199 701.8 1391 41.0
Ciclev10010907m.g Citrus clementina HOM05D002890 ORTHO05D005855 1.7e-199 701.0 1285 41.2
Sabra11G0001700 Salix brachista HOM05D002890 ORTHO05D005855 8.5e-199 698.7 1248 41.6
Actinidia36598 Actinidia chinensis HOM05D002890 ORTHO05D005855 1.2e-197 694.9 1306 42.9
COL.COLO4_31775 Corchorus olitorius HOM05D002890 ORTHO05D005855 1.6e-197 694.5 1398 40.0
Rhsim06G0075600 Rhododendron simsii HOM05D002890 ORTHO05D005855 1.5e-195 688.0 1314 40.8
Cc09_g01670 Coffea canephora HOM05D002890 ORTHO05D005855 4.9e-194 682.9 1238 42.7
MD10G1321400 Malus domestica HOM05D002890 ORTHO05D005855 1.6e-192 677.9 1263 42.1
vmacro21934 Vaccinium macrocarpon HOM05D002890 ORTHO05D005855 4.5e-192 676.4 1299 41.0
CAN.G65.76 Capsicum annuum HOM05D002890 ORTHO05D005855 1.5e-190 671.4 1241 41.3
TWI38G1984 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 9.5e-190 668.7 1260 41.3
RcHm_v2.0_Chr5g0002971 Rosa chinensis HOM05D002890 ORTHO05D005855 1.2e-189 668.3 1219 41.7
FAN21G0074 Fragaria x ananassa HOM05D002890 ORTHO05D005855 1.8e-188 664.5 1253 40.9
CANSAT56G4108 Cannabis sativa HOM05D002890 ORTHO05D005855 5.2e-188 662.9 1281 39.7
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 5.2e-188 662.9 1221 40.8
Prupe.4G020900 Prunus persica HOM05D002890 ORTHO05D005855 5.2e-188 662.9 1278 41.2
Solyc06g072270.4 Solanum lycopersicum HOM05D002890 ORTHO05D005855 5.2e-188 662.9 1234 41.1
VMungo0540G2163 Vigna mungo HOM05D002890 ORTHO05D005855 1.5e-187 661.4 1377 39.1
FvH4_3g02070 Fragaria vesca HOM05D002890 ORTHO05D005855 7.5e-187 659.1 1255 40.5
FAN25G2328 Fragaria x ananassa HOM05D002890 ORTHO05D005855 9.8e-187 658.7 1247 40.7
VMungo1309G2953 Vigna mungo HOM05D002890 ORTHO05D005855 3.7e-186 656.8 1345 40.0
Sopen06g028640 Solanum pennellii HOM05D002890 ORTHO05D005855 1.4e-185 654.8 1253 40.5
TWI38G1729 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 7.0e-185 652.5 1201 40.7
Phvul.006G149850 Phaseolus vulgaris HOM05D002890 ORTHO05D005855 1.7e-183 647.9 1383 39.0
Glyma.15G107800 Glycine max HOM05D002890 ORTHO05D005855 3.9e-183 646.7 1292 40.2
Glyma.13G204900 Glycine max HOM05D002890 ORTHO05D005855 5.0e-183 646.4 1321 39.7
MSTRG.23208 Avicennia marina HOM05D002890 ORTHO05D005855 9.5e-182 642.1 1286 40.3
arahy.Tifrunner.gnm1.ann1.1MU60G Arachis hypogaea HOM05D002890 ORTHO05D005855 2.3e-180 637.5 1249 40.1
arahy.Tifrunner.gnm1.ann1.3SKL4U Arachis hypogaea HOM05D002890 ORTHO05D005855 2.3e-180 637.5 1271 39.8
Migut.O00260 Erythranthe guttata HOM05D002890 ORTHO05D005855 3.4e-179 633.6 1338 38.7
Hund21410 Selenicereus undatus HOM05D002890 ORTHO05D005855 3.2e-177 627.1 1313 37.5
Ca_00660_v3 Cicer arietinum L. HOM05D002890 ORTHO05D005855 1.2e-176 625.2 1281 38.7
Nitab4.5_0001678g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 7.8e-176 622.5 1221 41.2
Lalb_Chr20g0118631 Lupinus albus HOM05D002890 ORTHO05D005855 6.6e-175 619.4 1260 38.8
SalBow5G1338 Salvia bowleyana HOM05D002890 ORTHO05D005855 4.3e-174 616.7 1261 39.3
Eucgr.E04054 Eucalyptus grandis HOM05D002890 ORTHO05D005855 7.3e-174 615.9 1185 39.2
Sc17g0007380 Simmondsia chinensis HOM05D002890 ORTHO05D005855 9.5e-174 615.5 1365 36.9
Nitab4.5_0000033g0410 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.8e-172 611.3 1269 40.1
MELO3C013937.2 Cucumis melo HOM05D002890 ORTHO05D005855 4.4e-171 606.7 1104 40.6
PGR042G1125 Punica granatum HOM05D002890 ORTHO05D005855 7.5e-171 605.9 1256 40.5
Lj6g0006472 Lotus japonicus HOM05D002890 ORTHO05D005855 8.3e-170 602.4 1306 40.1
Medtr2g023280 Medicago truncatula HOM05D002890 ORTHO05D005855 1.2e-168 598.6 1268 38.7
Psat3g207880 Pisum sativum HOM05D002890 ORTHO05D005855 2.1e-168 597.8 1273 37.7
Sed0017963 Sechium edule HOM05D002890 ORTHO05D005855 4.6e-168 596.7 1220 39.7
ATR0580G054 Amborella trichopoda HOM05D002890 ORTHO05D005855 1.3e-167 595.1 1476 35.0
Lj1g0005233 Lotus japonicus HOM05D002890 ORTHO05D005855 1.7e-167 594.7 1313 39.7
DCAR_028200 Daucus carota HOM05D002890 ORTHO05D005855 6.6e-167 592.8 1256 38.5
THA.LOC104812970 Tarenaya hassleriana HOM05D002890 ORTHO05D005855 6.6e-167 592.8 1220 39.3
CsaV3_3G002680 Cucumis sativus L. HOM05D002890 ORTHO05D005855 9.5e-166 589.0 1107 40.1
TPR.G9950 Trifolium pratense HOM05D002890 ORTHO05D005855 2.6e-163 580.9 1255 37.7
AUR62029351 Chenopodium quinoa HOM05D002890 ORTHO05D005855 4.4e-163 580.1 1267 36.9
CDE05G0302 Ceratophyllum demersum HOM05D002890 ORTHO05D005855 7.6e-163 579.3 1222 36.7
ECA236G1013 Erigeron canadensis HOM05D002890 ORTHO05D005855 5.4e-161 573.2 1189 39.9
CiPaw.10G071100 Carya illinoinensis HOM05D002890 ORTHO05D005855 5.1e-159 566.6 946 41.4
Peaxi162Scf00643g00544 Petunia axillaris HOM05D002890 ORTHO05D005855 5.1e-159 566.6 1298 36.7
MD05G1346800 Malus domestica HOM05D002890 ORTHO05D005855 2.4e-156 557.8 1085 39.7
ClCG10G002660 Citrullus lanatus HOM05D002890 ORTHO05D005855 3.1e-156 557.4 1254 36.0
unitig_749.g13717 Utricularia gibba HOM05D002890 ORTHO05D005855 3.8e-154 550.4 1255 37.5
MBI15_g03194_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D005855 9.3e-153 545.8 1404 34.5
HanXRQChr15g0470641 Helianthus annuus HOM05D002890 ORTHO05D005855 2.3e-151 541.2 1206 37.9
AUR62034232 Chenopodium quinoa HOM05D002890 ORTHO05D005855 3.9e-151 540.4 1234 35.7
EL10Ac4g08116 Beta vulgaris HOM05D002890 ORTHO05D005855 1.4e-145 521.9 1257 36.2
Ah.06g183850 Amaranthus hybridus HOM05D002890 ORTHO05D005855 4.2e-145 520.4 1238 36.3
Nitab4.5_0001247g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.7e-143 515.0 1106 38.9
SEGI_27437 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 6.9e-140 503.1 1212 35.8
Aa31LG2G1570 Aethionema arabicum HOM05D002890 ORTHO05D005855 6.7e-135 486.5 1208 34.9
CARHR046380 Cardamine hirsuta HOM05D002890 ORTHO05D005855 5.6e-134 483.4 1303 33.8
AL2G10210 Arabidopsis lyrata HOM05D002890 ORTHO05D005855 1.4e-132 478.8 1324 33.3
AT1G64570 Arabidopsis thaliana HOM05D002890 ORTHO05D005855 2.6e-131 474.6 1247 35.0
Zm00001eb310710 Zea mays HOM05D002890 ORTHO05D005855 2.6e-131 474.6 1185 35.7
Lsat_1_v5_gn_7_16040 Lactuca sativa HOM05D002890 ORTHO05D005855 4.5e-131 473.8 1168 36.0
Thhalv10023221m.g Eutrema salsugineum HOM05D002890 ORTHO05D005855 1.3e-130 472.2 1258 34.0
Sp2g00190 Schrenkiella parvula HOM05D002890 ORTHO05D005855 1.3e-130 472.2 1180 35.5
Carub.0002s0019 Capsella rubella HOM05D002890 ORTHO05D005855 4.8e-125 453.8 1262 34.1
BraA09t37106Z Brassica rapa HOM05D002890 ORTHO05D005855 1.9e-121 441.8 1258 33.9
A09p14580 Brassica napus HOM05D002890 ORTHO05D005855 3.2e-121 441.0 1257 33.7
Nitab4.5_0002954g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.6e-120 438.7 836 39.4
C09p17660 Brassica napus HOM05D002890 ORTHO05D005855 3.5e-120 437.6 1263 33.3
BolC9t54660H Brassica oleracea HOM05D002890 ORTHO05D005855 3.5e-120 437.6 1263 33.3
Nitab4.5_0022153g0010 Nicotiana tabacum HOM05D002890 ORTHO05D005855 2.4e-116 424.9 591 46.2
HPP92_025073 Vanilla planifolia HOM05D002890 ORTHO05D005855 3.6e-112 411.0 1228 33.6
Mapoly0029s0108 Marchantia polymorpha HOM05D002890 ORTHO05D005855 2.0e-110 405.2 1129 32.4
Atru.chr10.2227 Acer truncatum HOM05D002890 ORTHO05D005855 1.7e-106 392.1 639 42.9
Nn4g25681 Nelumbo nucifera HOM05D002890 ORTHO05D005855 2.5e-105 388.3 663 44.0
Pp3c26_140 Physcomitrium patens HOM05D002890 ORTHO05D005855 2.6e-99 368.2 816 35.5
Actinidia10696 Actinidia chinensis HOM05D002890 ORTHO05D005855 1.8e-92 345.5 643 41.5
HPP92_025078 Vanilla planifolia HOM05D002890 ORTHO05D005855 4.2e-89 334.3 618 40.5
SMO364G0505 Selaginella moellendorffii HOM05D002890 ORTHO05D005855 4.7e-88 330.9 490 43.3
BcaC04g22581 Brassica carinata HOM05D002890 ORTHO05D007906 4.1e-84 317.8 459 43.1
AagrBONN_evm.TU.Sc2ySwM_228.3189 Anthoceros agrestis HOM05D002890 ORTHO05D005855 5.0e-82 310.8 680 34.4
Oeu039345.1 Olea europaea HOM05D002890 ORTHO05D005855 3.0e-79 301.6 429 43.1
RcHm_v2.0_Chr5g0003091 Rosa chinensis HOM05D002890 ORTHO05D005855 7.0e-76 290.4 304 53.3
Atru.chr10.2228 Acer truncatum HOM05D002890 ORTHO05D005855 1.9e-73 282.3 509 41.1
SHI02202 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-72 278.9 478 41.2
RcHm_v2.0_Chr5g0003031 Rosa chinensis HOM05D002890 ORTHO05D005855 3.1e-63 248.4 269 52.0
SGA_v2.0_scaffold25G10747 Striga asiatica HOM05D002890 ORTHO05D005855 1.7e-61 242.7 587 35.3
Lj1P1230T41 Lonicera japonica HOM05D002890 ORTHO05D005855 2.7e-51 208.8 377 39.0
BcaC01g05870 Brassica carinata HOM05D002890 ORTHO05D005855 1.8e-47 196.1 485 32.8
QL05p073153 Quercus lobata HOM05D002890 ORTHO05D005855 4.0e-47 194.9 591 30.6
CBR_g32188 Chara braunii HOM05D002890 ORTHO05D005855 8.9e-47 193.7 790 26.8
C03p21570 Brassica napus HOM05D002890 ORTHO05D005855 1.2e-46 193.4 485 32.2
SHI01979 Sapria himalayana HOM05D002890 ORTHO05D005855 5.8e-46 191.0 153 60.1
SEGI_38151 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 1.5e-41 176.4 527 34.0
Potri.004G015034 Populus trichocarpa HOM05D002890 ORTHO05D005855 8.9e-39 167.2 240 44.2
Oeu002905.1 Olea europaea HOM05D002890 ORTHO05D005855 2.0e-38 166.0 493 34.3
BolC3t14541H Brassica oleracea HOM05D002890 ORTHO05D005855 6.0e-35 154.5 449 30.3
Cpa.g.c46709 Carica papaya HOM05D002890 ORTHO05D005855 1.8e-31 142.9 179 48.0
MD05G1347100 Malus domestica HOM05D002890 ORTHO05D005855 1.5e-30 139.8 350 36.6
QL05p073148 Quercus lobata HOM05D002890 ORTHO05D005855 7.6e-30 137.5 559 29.7
Medtr2g023290 Medicago truncatula HOM05D002975 ORTHO05D005855 9.9e-30 137.1 501 31.5
MCO05G671 Micromonas commoda HOM05D002890 ORTHO05D005855 1.9e-20 106.3 406 28.8
Nitab4.5_0002954g0080 Nicotiana tabacum HOM05D002890 ORTHO05D005855 8.7e-18 97.4 123 45.5
HPP92_025077 Vanilla planifolia HOM05D002890 ORTHO05D005855 8.7e-18 97.4 517 29.6
BcaC04g22582 Brassica carinata HOM05D002890 ORTHO05D005855 3.3e-17 95.5 439 29.2
BcaB07g31476 Brassica carinata HOM05D002890 ORTHO05D005855 6.2e-16 91.3 437 29.1
CiPaw.10G071000 Carya illinoinensis HOM05D002890 ORTHO05D005855 6.9e-15 87.8 277 38.3
SEGI_20102 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 3.8e-13 82.0 102 45.1
Duzib160G0022 Durio zibethinus HOM05D002890 ORTHO05D005855 1.6e-11 76.6 276 34.1
Nitab4.5_0000267g0080 Nicotiana tabacum HOM05D002890 ORTHO05D005855 3.5e-11 75.5 169 34.9
Potri.004G015001 Populus trichocarpa HOM05D002890 ORTHO05D005855 3.0e-10 72.4 165 35.2


User provided reference genes

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