Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2886 Papaver somniferum HOM05D064671 ORTHO05D004092 0.0e+00 1210.3 709 100.0
PSO782G3516 Papaver somniferum HOM05D064671 ORTHO05D004092 1.1e-293 1013.1 719 85.5
PSO478G0660 Papaver somniferum HOM05D057890 ORTHO05D004092 9.8e-45 186.0 372 40.1
PSO782G3290 Papaver somniferum HOM05D057890 ORTHO05D004092 1.7e-44 185.3 464 35.1
PSO782G0005 Papaver somniferum HOM05D004189 ORTHO05D004092 2.7e-42 177.9 355 40.0
PSO478G0985 Papaver somniferum HOM05D004189 ORTHO05D004092 8.3e-36 156.4 418 33.7
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 5.8e-21 107.1 296 34.1
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 4.3e-16 90.9 380 29.7
ECA238G1803 Erigeron canadensis HOM05D004189 ORTHO05D004092 9.5e-16 89.7 299 34.1
QL09p014192 Quercus lobata HOM05D004189 ORTHO05D004092 9.5e-16 89.7 302 33.4
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 9.5e-16 89.7 370 28.9
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 1.2e-15 89.4 303 31.7
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 1.2e-15 89.4 303 32.0
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 1.6e-15 89.0 307 31.9
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 4.7e-15 87.4 341 31.7
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 8.1e-15 86.7 225 37.8
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 1.8e-14 85.5 279 34.1
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 5.2e-14 84.0 313 31.0
QL09p014207 Quercus lobata HOM05D004189 ORTHO05D004092 1.5e-13 82.4 307 32.6
CSS0007027 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 2.6e-13 81.6 309 33.7
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 2.6e-13 81.6 225 37.3
Thecc.03G176700 Theobroma cacao HOM05D004189 ORTHO05D004092 2.6e-13 81.6 191 39.3
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 3.4e-13 81.3 365 29.6
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.3e-12 79.3 316 28.8
CAN.G490.32 Capsicum annuum HOM05D004189 ORTHO05D004092 1.7e-12 79.0 356 31.5
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 1.7e-12 79.0 279 31.9
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 2.2e-12 78.6 310 31.3
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 2.9e-12 78.2 306 30.1
RcHm_v2.0_Chr1g0377331 Rosa chinensis HOM05D013146 ORTHO05D004092 3.7e-12 77.8 272 32.4
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 3.7e-12 77.8 344 28.2
CSS0002108 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 1.4e-11 75.9 311 31.5
MD07G1268800 Malus domestica HOM05D004189 ORTHO05D004092 1.4e-11 75.9 297 31.6
Glyma.16G193200 Glycine max HOM05D004189 ORTHO05D004092 2.4e-11 75.1 347 30.5
THA.LOC104811978 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 7.1e-11 73.6 320 30.6
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 9.2e-11 73.2 303 30.0
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 1.2e-10 72.8 307 28.0
arahy.Tifrunner.gnm1.ann1.EQ3RBX Arachis hypogaea HOM05D004189 ORTHO05D004092 2.1e-10 72.0 248 33.1
Duzib205G0656 Durio zibethinus HOM05D004189 ORTHO05D004092 2.1e-10 72.0 287 30.7
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 2.1e-10 72.0 278 32.0
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.7e-10 71.6 239 35.6
FAN03G0716 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.7e-10 71.6 238 33.6
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 2.7e-10 71.6 283 29.0
vmacro06681 Vaccinium macrocarpon HOM05D004189 ORTHO05D004092 4.6e-10 70.9 357 29.1
arahy.Tifrunner.gnm1.ann1.E2ZRS1 Arachis hypogaea HOM05D004189 ORTHO05D004092 6.0e-10 70.5 264 32.6
FvH4_7g29491 Fragaria vesca HOM05D013146 ORTHO05D004092 6.0e-10 70.5 315 32.4
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 6.0e-10 70.5 247 36.0
Aqoxy7G00356 Aquilegia oxysepala HOM05D004189 ORTHO05D004092 1.7e-09 68.9 392 26.5
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 1.7e-09 68.9 455 27.7
FAN06G2021 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.7e-09 68.9 319 33.5
BcaB05g21946 Brassica carinata HOM05D004189 ORTHO05D004092 2.3e-09 68.6 259 27.8
Migut.F01119 Erythranthe guttata HOM05D004189 ORTHO05D004092 3.0e-09 68.2 299 30.4
Lsat_1_v5_gn_2_132020 Lactuca sativa HOM05D004189 ORTHO05D004092 3.0e-09 68.2 270 30.0
Nn1g01463 Nelumbo nucifera HOM05D004189 ORTHO05D004092 3.0e-09 68.2 262 31.7
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 6.6e-09 67.0 366 28.7
Glyma.16G189900 Glycine max HOM05D004189 ORTHO05D004092 8.6e-09 66.6 217 33.6
FAN06G1386 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.1e-08 66.2 316 32.0
HanXRQChr07g0207021 Helianthus annuus HOM05D004189 ORTHO05D004092 1.1e-08 66.2 306 28.8
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 1.5e-08 65.9 277 31.4
arahy.Tifrunner.gnm1.ann1.UM41MD Arachis hypogaea HOM05D004189 ORTHO05D004092 2.5e-08 65.1 163 35.6
arahy.Tifrunner.gnm1.ann1.06RI6S Arachis hypogaea HOM05D004189 ORTHO05D004092 5.6e-08 63.9 324 29.3
Phvul.007G069800 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 1.6e-07 62.4 134 38.8
Carub.0007s1540 Capsella rubella HOM05D004189 ORTHO05D004092 2.8e-07 61.6 231 32.5
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 2.8e-07 61.6 165 35.8
Lsat_1_v5_gn_8_8621 Lactuca sativa HOM05D004189 ORTHO05D004092 2.8e-07 61.6 246 28.5
CARHR233000 Cardamine hirsuta HOM05D004189 ORTHO05D004092 3.6e-07 61.2 224 31.7
Migut.F00339 Erythranthe guttata HOM05D004189 ORTHO05D004092 6.2e-07 60.5 267 30.7
Rhsim03G0180900 Rhododendron simsii HOM05D004189 ORTHO05D004092 6.2e-07 60.5 311 31.2
BcaC03g14545 Brassica carinata HOM05D004189 ORTHO05D004092 8.1e-07 60.1 288 28.8
Aa31LG7G12260 Aethionema arabicum HOM05D004189 ORTHO05D004092 1.1e-06 59.7 160 36.9
Glyma.09G139600 Glycine max HOM05D004189 ORTHO05D004092 1.1e-06 59.7 267 30.0
FAN10G2986 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.4e-06 59.3 216 34.3
arahy.Tifrunner.gnm1.ann1.4R9DEN Arachis hypogaea HOM05D001888 ORTHO05D001842 2.3e-06 58.5 324 30.2
Oeu056256.2 Olea europaea HOM05D004189 ORTHO05D004092 3.1e-06 58.2 184 32.1
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 4.0e-06 57.8 97 41.2
ECA233G5127 Erigeron canadensis HOM05D004189 ORTHO05D004092 4.0e-06 57.8 243 28.4
Dinv28441 Davidia involucrata HOM05D004189 ORTHO05D004092 6.8e-06 57.0 302 27.5
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 6.8e-06 57.0 357 26.6


User provided reference genes

Program Settings