Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2842 Papaver somniferum HOM05D002030 ORTHO05D007413 6.3e-188 660.6 331 100.0
PSO339G1606 Papaver somniferum HOM05D002030 ORTHO05D007413 1.9e-160 569.3 362 80.7
PSO384G3354 Papaver somniferum HOM05D002030 ORTHO05D007413 4.0e-158 561.6 362 79.8
TAR628G0894 Trochodendron aralioides HOM05D002030 ORTHO05D007413 1.1e-120 437.2 362 62.2
Nn7g36615 Nelumbo nucifera HOM05D002030 ORTHO05D007413 9.6e-120 434.1 362 62.4
Duzib168G1726 Durio zibethinus HOM05D002030 ORTHO05D007413 5.3e-118 428.3 363 61.2
Dinv05065 Davidia involucrata HOM05D002030 ORTHO05D007413 9.0e-118 427.6 363 62.5
Thecc.09G250300 Theobroma cacao HOM05D002030 ORTHO05D007413 2.2e-116 422.9 363 60.9
COL.COLO4_33273 Corchorus olitorius HOM05D002030 ORTHO05D007413 1.9e-115 419.9 363 61.2
Aqoxy1G00344 Aquilegia oxysepala HOM05D002030 ORTHO05D007413 9.3e-115 417.5 363 59.2
Ciclev10018312m.g Citrus clementina HOM05D002030 ORTHO05D007413 1.2e-114 417.2 363 60.3
CANSAT25G2826 Cannabis sativa HOM05D002030 ORTHO05D007413 1.6e-114 416.8 363 59.8
Gohir.A05G071600 Gossypium hirsutum HOM05D002030 ORTHO05D007413 4.3e-112 408.7 363 57.9
QL04p021544 Quercus lobata HOM05D002030 ORTHO05D007413 4.3e-112 408.7 363 58.4
Haze_02982 Corylus avellana HOM05D002030 ORTHO05D007413 1.6e-111 406.8 363 58.7
Cfa010958 Carpinus fangiana HOM05D002030 ORTHO05D007413 2.8e-111 406.0 363 58.4
CSS0014605 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 4.8e-111 405.2 363 58.4
CSS0026005 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 4.8e-111 405.2 363 58.4
Hma1.2p1_0872F.1_g231160 Hydrangea macrophylla HOM05D002030 ORTHO05D007413 2.6e-109 399.4 363 58.1
Cfa019819 Carpinus fangiana HOM05D002030 ORTHO05D007413 3.4e-109 399.1 363 57.6
TWI09G0205 Tripterygium wilfordii HOM05D002030 ORTHO05D007413 2.9e-108 396.0 363 56.7
CiPaw.06G055000 Carya illinoinensis HOM05D002030 ORTHO05D007413 3.8e-108 395.6 363 57.0
Potri.001G277200 Populus trichocarpa HOM05D002030 ORTHO05D007413 4.9e-108 395.2 363 56.2
Cpa.g.sc529.1 Carica papaya HOM05D002030 ORTHO05D007413 6.5e-108 394.8 363 58.4
Cc01_g00100 Coffea canephora HOM05D002030 ORTHO05D007413 6.5e-108 394.8 363 57.9
Rhsim13G0212600 Rhododendron simsii HOM05D002030 ORTHO05D007413 4.2e-107 392.1 363 57.6
Sabra16G0171300 Salix brachista HOM05D002030 ORTHO05D007413 3.5e-106 389.0 363 55.6
Gorai.009G075600 Gossypium raimondii HOM05D002030 ORTHO05D007413 1.3e-105 387.1 363 56.5
Manes.02G141000 Manihot esculenta HOM05D002030 ORTHO05D007413 5.1e-105 385.2 363 57.6
Atru.chr3.2803 Acer truncatum HOM05D002030 ORTHO05D007413 1.1e-104 384.0 353 58.1
Prupe.1G578000 Prunus persica HOM05D002030 ORTHO05D007413 3.3e-104 382.5 363 56.2
MBI03_g13094_MAGBIO Magnolia biondii HOM05D002030 ORTHO05D007413 9.6e-104 380.9 362 56.6
ClCG03G012710 Citrullus lanatus HOM05D002030 ORTHO05D007413 1.3e-103 380.6 363 54.5
AUR62039829 Chenopodium quinoa HOM05D002030 ORTHO05D004391 4.1e-102 375.6 363 57.0
Lalb_Chr02g0151181 Lupinus albus HOM05D002030 ORTHO05D007413 6.9e-102 374.8 365 54.2
SHI24995 Sapria himalayana HOM05D002030 ORTHO05D007413 6.9e-102 374.8 363 53.7
CsaV3_1G043250 Cucumis sativus L. HOM05D002030 ORTHO05D007413 9.0e-102 374.4 363 54.3
RcHm_v2.0_Chr6g0267091 Rosa chinensis HOM05D002030 ORTHO05D007413 9.0e-102 374.4 363 55.4
THA.LOC104800445 Tarenaya hassleriana HOM05D002030 ORTHO05D007413 2.0e-101 373.2 363 53.4
Oeu024896.1 Olea europaea HOM05D002030 ORTHO05D007413 2.6e-101 372.9 363 54.3
MD11G1194100 Malus domestica HOM05D002030 ORTHO05D007413 4.5e-101 372.1 360 54.7
MELO3C015133.2 Cucumis melo HOM05D002030 ORTHO05D007413 2.2e-100 369.8 363 53.7
Nitab4.5_0002358g0010 Nicotiana tabacum HOM05D002030 ORTHO05D007413 5.0e-100 368.6 363 52.6
RcHm_v2.0_Chr6g0255981 Rosa chinensis HOM05D002030 ORTHO05D007413 8.4e-100 367.9 352 55.7
Peaxi162Scf00108g00034 Petunia axillaris HOM05D002030 ORTHO05D007413 1.4e-99 367.1 363 54.0
MD15G1397300 Malus domestica HOM05D002030 ORTHO05D007413 1.6e-98 363.6 360 54.2
CAN.G993.31 Capsicum annuum HOM05D002030 ORTHO05D007413 2.1e-98 363.2 363 51.0
Migut.J01395 Erythranthe guttata HOM05D002030 ORTHO05D007413 2.1e-98 363.2 363 54.3
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 3.5e-98 362.5 363 53.4
ATR0693G336 Amborella trichopoda HOM05D002030 ORTHO05D007413 4.6e-98 362.1 362 52.8
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 6.1e-98 361.7 363 53.4
PGSC0003DMG401026992 Solanum tuberosum HOM05D002030 ORTHO05D007413 3.9e-97 359.0 363 52.1
MSTRG.19666 Avicennia marina HOM05D002030 ORTHO05D007413 6.7e-97 358.2 363 53.4
Psat4g003440 Pisum sativum HOM05D002030 ORTHO05D007413 3.3e-96 355.9 364 53.6
Lj5g0021026 Lotus japonicus HOM05D002030 ORTHO05D007413 5.7e-96 355.1 363 53.4
Ah.04g162000 Amaranthus hybridus HOM05D002030 ORTHO05D007413 9.7e-96 354.4 363 54.3
Lsat_1_v5_gn_5_164660 Lactuca sativa HOM05D002030 ORTHO05D007413 9.7e-96 354.4 363 53.2
Sopen06g027940 Solanum pennellii HOM05D002030 ORTHO05D007413 6.3e-95 351.7 363 50.7
Solyc06g071630.2 Solanum lycopersicum HOM05D002030 ORTHO05D007413 1.4e-94 350.5 363 50.7
Sc19g0005890 Simmondsia chinensis HOM05D002030 ORTHO05D007413 1.8e-94 350.1 363 51.0
FvH4_3g28960 Fragaria vesca HOM05D002030 ORTHO05D007413 7.7e-93 344.7 363 52.6
HanXRQChr10g0319281 Helianthus annuus HOM05D002030 ORTHO05D007413 1.7e-92 343.6 363 51.5
arahy.Tifrunner.gnm1.ann1.DSBP33 Arachis hypogaea HOM05D002030 ORTHO05D007413 9.4e-91 337.8 367 49.3
arahy.Tifrunner.gnm1.ann1.59T0PU Arachis hypogaea HOM05D002030 ORTHO05D007413 2.1e-90 336.7 367 49.3
Medtr4g132910 Medicago truncatula HOM05D002030 ORTHO05D007413 7.9e-90 334.7 364 51.4
SGA_v2.0_scaffold45G17005 Striga asiatica HOM05D002030 ORTHO05D007413 7.9e-90 334.7 363 49.3
Lj4P151T58 Lonicera japonica HOM05D002030 ORTHO05D007413 3.0e-89 332.8 363 52.3
Thhalv10017599m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 3.9e-89 332.4 364 49.5
AL7G41540 Arabidopsis lyrata HOM05D002030 ORTHO05D007413 5.7e-88 328.6 364 48.6
Carub.0007s2761 Capsella rubella HOM05D002030 ORTHO05D007413 9.7e-88 327.8 363 48.8
RcHm_v2.0_Chr2g0127281 Rosa chinensis HOM05D002030 ORTHO05D007413 1.3e-87 327.4 363 50.1
CARHR220820 Cardamine hirsuta HOM05D002030 ORTHO05D007413 1.7e-87 327.0 362 48.6
Aa31LG9G2740 Aethionema arabicum HOM05D002030 ORTHO05D007413 1.4e-86 323.9 361 47.6
AUR62000179 Chenopodium quinoa HOM05D002030 ORTHO05D007413 1.5e-85 320.5 363 51.0
HPP92_008257 Vanilla planifolia HOM05D002030 ORTHO05D007413 3.4e-85 319.3 360 46.7
BolC3t14628H Brassica oleracea HOM05D002030 ORTHO05D007413 4.5e-85 318.9 361 48.5
Thhalv10027440m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 7.7e-85 318.2 364 47.8
C03p22450 Brassica napus HOM05D002030 ORTHO05D007413 1.0e-84 317.8 361 48.2
BraA03t11180Z Brassica rapa HOM05D002030 ORTHO05D007413 2.2e-84 316.6 359 48.5
Phvul.007G141800 Phaseolus vulgaris HOM05D002030 ORTHO05D007413 2.9e-84 316.2 356 49.7
VMungo0720G1521 Vigna mungo HOM05D002030 ORTHO05D007413 2.9e-84 316.2 364 50.3
A03p19250 Brassica napus HOM05D002030 ORTHO05D007413 6.5e-84 315.1 359 48.5
unitig_0.g561 Utricularia gibba HOM05D002030 ORTHO05D007413 8.5e-84 314.7 364 47.5
Sp7g12690 Schrenkiella parvula HOM05D002030 ORTHO05D007413 4.7e-82 308.9 365 47.1
Rhsim13G0218500 Rhododendron simsii HOM05D002030 ORTHO05D007413 1.8e-78 297.0 330 48.8
AT4G14590 Arabidopsis thaliana HOM05D002030 ORTHO05D007413 2.4e-78 296.6 364 45.9
PGR102G2312 Punica granatum HOM05D002030 ORTHO05D007413 7.0e-78 295.0 362 47.2
Mapoly0033s0111 Marchantia polymorpha HOM05D002030 ORTHO05D007413 6.1e-74 282.0 353 42.5
CSS0011008 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 4.0e-73 279.3 259 57.5
Glyma.20G191000 Glycine max HOM05D002030 ORTHO05D007413 6.7e-73 278.5 374 44.7
Actinidia06954 Actinidia chinensis HOM05D002030 ORTHO05D007413 9.7e-72 274.6 245 60.8
BcaC08g44279 Brassica carinata HOM05D002030 ORTHO05D007413 4.8e-71 272.3 366 44.3
C06p16980 Brassica napus HOM05D002030 ORTHO05D007413 4.8e-71 272.3 366 44.3
Ca_21049_v3 Cicer arietinum L. HOM05D002030 ORTHO05D007413 6.3e-71 271.9 363 46.0
Peaxi162Scf00177g00919 Petunia axillaris HOM05D002030 ORTHO05D007413 8.5e-68 261.5 253 55.7
Pp3c16_4000 Physcomitrium patens HOM05D002030 ORTHO05D007413 8.5e-68 261.5 364 40.9
SMO141G0167 Selaginella moellendorffii HOM05D002030 ORTHO05D007413 2.3e-65 253.4 375 39.7
TPR.G37056 Trifolium pratense HOM05D002030 ORTHO05D007413 3.0e-65 253.1 253 54.5
HanXRQChr14g0432371 Helianthus annuus HOM05D002030 ORTHO05D007413 1.2e-64 251.1 362 42.5
AagrBONN_evm.TU.Sc2ySwM_368.2374 Anthoceros agrestis HOM05D002030 ORTHO05D007413 1.5e-64 250.8 362 40.6
SEGI_26527 Sequoiadendron giganteum HOM05D002030 ORTHO05D007413 3.4e-64 249.6 354 42.1
ECA248G2873 Erigeron canadensis HOM05D002030 ORTHO05D007413 3.5e-61 239.6 259 53.7
COL.COLO4_19604 Corchorus olitorius HOM05D002030 ORTHO05D007413 1.8e-57 227.3 196 60.7
CBR_g18996 Chara braunii HOM05D002030 ORTHO05D007413 2.7e-53 213.4 328 38.1
BcaC01g05780 Brassica carinata HOM05D002030 ORTHO05D007413 4.5e-53 212.6 215 50.2
CDE02G3397 Ceratophyllum demersum HOM05D002030 ORTHO05D007413 5.9e-53 212.2 208 54.3
GSVIVG01037252001 Vitis vinifera HOM05D002030 ORTHO05D007413 6.1e-50 202.2 362 37.6
arahy.Tifrunner.gnm1.ann1.G6N61A Arachis hypogaea HOM05D002030 ORTHO05D007413 2.0e-48 197.2 272 44.5
Gohir.D05G074500 Gossypium hirsutum HOM05D002030 ORTHO05D007413 9.2e-46 188.3 172 56.4
Atru.chr1.1605 Acer truncatum HOM05D002030 ORTHO05D007413 7.8e-45 185.3 173 56.1
FAN21G2573 Fragaria x ananassa HOM05D002030 ORTHO05D007413 1.6e-42 177.6 190 52.6
Eucgr.B03727 Eucalyptus grandis HOM05D002030 ORTHO05D007413 1.1e-38 164.9 350 32.6
DCAR_031630 Daucus carota HOM05D002030 ORTHO05D007413 1.4e-38 164.5 202 45.0
Cc04_g16190 Coffea canephora HOM05D002030 ORTHO05D007413 4.4e-32 142.9 362 31.2
BolC6t36898H Brassica oleracea HOM05D002030 ORTHO05D007413 9.8e-32 141.7 365 32.1
Zm00001eb091720 Zea mays HOM05D002030 ORTHO05D007413 2.1e-26 124.0 223 35.9
Glyma.10G199232 Glycine max HOM05D002030 ORTHO05D007413 3.2e-22 110.2 146 46.6
Os11g0171400 Oryza sativa ssp. japonica HOM05D002030 ORTHO05D007413 1.7e-20 104.4 162 41.4
Sc16g0005130 Simmondsia chinensis HOM05D002030 ORTHO05D007413 2.7e-13 80.5 73 53.4
Nitab4.5_0001515g0060 Nicotiana tabacum HOM05D002030 ORTHO05D007413 4.3e-11 73.2 90 47.8
Sed0013906 Sechium edule HOM05D002030 ORTHO05D007413 4.3e-11 73.2 90 44.4


User provided reference genes

Program Settings