Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 1.8e-179 632.5 327 100.0
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 1.5e-165 586.3 327 94.2
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 7.8e-114 414.5 285 73.3
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.0e-113 414.1 322 69.3
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 3.0e-113 412.5 280 74.3
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 8.6e-113 411.0 324 67.6
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 1.2e-111 407.1 295 70.8
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 4.7e-111 405.2 274 75.9
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 6.2e-111 404.8 280 73.9
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 2.3e-110 402.9 329 64.7
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 3.1e-110 402.5 319 67.7
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 8.9e-110 401.0 267 73.4
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 1.2e-109 400.6 286 71.7
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 5.8e-109 398.3 319 64.6
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 9.8e-109 397.5 296 68.2
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 1.7e-108 396.7 267 72.7
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 2.2e-108 396.4 267 73.0
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 2.2e-108 396.4 267 73.0
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 8.3e-108 394.4 314 66.2
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 1.9e-107 393.3 318 65.4
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 3.2e-107 392.5 312 66.3
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 3.2e-107 392.5 297 67.7
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 5.4e-107 391.7 275 70.2
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 5.4e-107 391.7 297 68.7
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 7.1e-107 391.3 326 64.1
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 1.2e-106 390.6 258 75.6
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 1.2e-106 390.6 318 64.5
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 2.1e-106 389.8 319 65.8
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 2.1e-106 389.8 276 72.5
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 2.7e-106 389.4 314 65.3
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 3.5e-106 389.0 322 66.5
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 3.5e-106 389.0 322 66.5
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 4.6e-106 388.7 310 66.1
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 6.0e-106 388.3 325 65.2
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 1.3e-105 387.1 317 65.9
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 2.3e-105 386.3 325 65.2
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 3.0e-105 386.0 321 62.9
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 3.9e-105 385.6 292 69.9
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 8.6e-105 384.4 337 61.4
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 8.6e-105 384.4 318 64.2
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 2.5e-104 382.9 315 63.2
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 3.3e-104 382.5 316 64.6
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 4.3e-104 382.1 317 64.0
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 2.8e-103 379.4 315 62.9
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 3.6e-103 379.0 324 63.0
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 3.6e-103 379.0 319 64.6
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 4.7e-103 378.6 315 63.5
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 1.1e-102 377.5 309 65.4
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.4e-102 377.1 309 65.4
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 1.8e-102 376.7 304 65.8
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 6.8e-102 374.8 321 64.2
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.5e-101 373.6 309 64.7
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 2.6e-101 372.9 273 67.4
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 3.4e-101 372.5 315 63.5
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 4.4e-101 372.1 306 65.4
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 7.5e-101 371.3 333 59.5
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 7.5e-101 371.3 255 72.2
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 4.9e-100 368.6 321 62.6
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 3.2e-99 365.9 303 63.7
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 3.2e-99 365.9 263 71.1
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 5.4e-99 365.2 295 64.7
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 5.4e-99 365.2 320 61.2
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 9.2e-99 364.4 316 64.2
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 6.0e-98 361.7 313 62.0
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 6.0e-98 361.7 297 66.0
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 1.0e-97 360.9 313 62.6
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 1.7e-97 360.1 256 71.9
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 1.1e-96 357.5 255 70.2
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 1.1e-96 357.5 309 61.8
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 3.3e-96 355.9 318 61.9
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 7.3e-96 354.8 210 79.5
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 3.6e-95 352.4 315 61.6
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 3.6e-95 352.4 318 58.8
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 6.2e-95 351.7 320 62.5
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 8.1e-95 351.3 285 64.9
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 1.1e-94 350.9 315 61.6
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.8e-94 350.1 284 62.3
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 1.8e-94 350.1 276 65.2
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 3.1e-94 349.4 197 84.3
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 6.8e-94 348.2 252 70.2
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 1.2e-93 347.4 314 62.1
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 1.5e-93 347.1 285 65.3
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 2.6e-93 346.3 270 66.7
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.2e-92 343.2 297 64.3
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 2.9e-92 342.8 320 59.4
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 2.9e-92 342.8 320 59.4
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 1.6e-90 337.0 277 61.7
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 2.7e-90 336.3 334 56.9
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 3.3e-88 329.3 297 63.6
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 4.8e-87 325.5 221 72.4
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 7.6e-85 318.2 219 72.1
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 6.4e-84 315.1 270 63.7
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 2.4e-83 313.2 312 53.8
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 7.8e-82 308.1 176 81.8
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 2.8e-79 299.7 264 63.3
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 9.0e-78 294.7 225 66.2
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 1.7e-76 290.4 176 80.7
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 5.6e-72 275.4 309 50.2
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.4e-70 270.0 180 72.8
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 2.6e-69 266.5 205 65.4
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 1.3e-65 254.2 190 68.4
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 5.7e-64 248.8 206 60.2
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 6.2e-63 245.4 196 60.2
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 4.0e-62 242.7 200 57.0
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 5.8e-61 238.8 236 57.2
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 1.9e-59 233.8 208 56.7
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 8.7e-57 224.9 203 60.1
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 1.5e-48 197.6 240 45.8
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 8.5e-44 181.8 166 54.2
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 2.1e-42 177.2 211 44.1
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 3.3e-40 169.9 257 36.6
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 2.8e-39 166.8 127 60.6
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 4.7e-34 149.4 97 73.2
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 3.7e-31 139.8 96 71.9
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 5.3e-30 136.0 87 77.0
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 1.6e-29 134.4 119 55.5
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 4.4e-24 116.3 61 90.2
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.2e-21 108.2 75 73.3
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 1.5e-08 64.7 37 78.4
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 1.5e-08 64.7 139 32.4
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 1.7e-07 61.2 116 43.1


User provided reference genes

Program Settings