Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 2.1e-296 1021.5 501 100.0
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 2.8e-219 765.4 495 75.8
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 6.8e-218 760.8 498 73.7
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 4.1e-215 751.5 496 74.8
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 4.1e-215 751.5 492 74.8
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 5.4e-215 751.1 501 73.7
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 1.5e-212 743.0 498 71.5
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 2.8e-211 738.8 492 73.8
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 3.6e-211 738.4 495 73.3
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 6.1e-211 737.6 499 72.9
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 3.0e-210 735.3 495 71.5
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 6.8e-210 734.2 519 70.1
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 3.4e-209 731.9 493 70.6
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 7.5e-209 730.7 490 71.4
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 7.5e-209 730.7 495 72.1
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 9.8e-209 730.3 495 71.7
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 9.8e-209 730.3 493 72.8
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 1.3e-208 729.9 495 71.1
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 2.9e-208 728.8 501 71.1
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 9.2e-207 723.8 502 70.7
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 2.0e-206 722.6 495 71.9
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 2.0e-206 722.6 539 67.0
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 3.5e-206 721.8 493 71.8
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 7.8e-206 720.7 492 70.7
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 1.3e-205 719.9 493 72.8
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.3e-205 719.9 525 67.6
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.3e-205 719.9 492 70.3
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 2.3e-205 719.2 503 70.4
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 3.0e-205 718.8 501 68.9
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 3.0e-205 718.8 495 69.9
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 5.0e-205 718.0 499 70.3
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 6.6e-205 717.6 501 69.7
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 1.9e-204 716.1 493 70.0
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.5e-204 715.7 501 68.9
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 4.3e-204 714.9 525 66.9
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 2.1e-203 712.6 499 69.7
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 3.6e-203 711.8 496 69.8
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 8.0e-203 710.7 500 68.2
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 8.0e-203 710.7 494 70.0
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 8.0e-203 710.7 498 69.7
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.1e-202 708.8 525 66.9
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 1.2e-201 706.8 493 70.0
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 5.8e-201 704.5 501 69.3
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 2.9e-200 702.2 500 68.6
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 6.4e-200 701.0 505 69.3
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 6.4e-200 701.0 577 63.3
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 1.4e-199 699.9 495 69.1
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.9e-199 699.5 495 68.7
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 4.1e-199 698.4 494 67.6
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 4.6e-198 694.9 527 65.5
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 1.1e-196 690.3 495 68.3
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 4.3e-196 688.3 539 64.4
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 8.3e-192 674.1 501 65.5
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 1.2e-190 670.2 498 67.3
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 4.0e-186 655.2 534 60.3
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 9.9e-185 650.6 493 67.3
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 9.9e-185 650.6 492 62.8
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 1.4e-183 646.7 496 62.3
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 1.0e-181 640.6 422 74.6
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 1.3e-181 640.2 498 62.0
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 6.6e-181 637.9 431 71.7
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 2.2e-176 622.9 496 61.9
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 2.7e-174 615.9 442 69.2
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 2.7e-174 615.9 442 69.2
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 2.7e-174 615.9 499 61.9
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.0e-173 614.0 500 61.6
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.3e-173 612.8 455 66.4
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 2.5e-172 609.4 433 68.1
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 7.3e-172 607.8 410 72.2
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 9.6e-172 607.4 497 63.2
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 3.6e-171 605.5 495 61.2
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.4e-169 599.0 409 71.9
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 1.2e-166 590.5 493 59.4
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 4.0e-162 575.5 394 71.6
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 2.6e-161 572.8 544 57.0
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 1.8e-157 560.1 496 58.9
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 1.1e-148 530.8 397 66.5
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 1.2e-142 510.8 352 71.0
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 1.2e-142 510.8 362 68.8
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.3e-139 500.7 421 64.4
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 1.6e-113 414.1 297 68.0
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 6.4e-91 339.0 254 65.4
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 1.6e-65 254.6 480 31.5
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 7.8e-65 252.3 169 72.2
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.3e-64 251.5 145 83.4
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 2.7e-57 227.3 235 54.9
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 1.2e-52 211.8 159 68.6
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 1.0e-40 172.2 120 65.8
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.5e-28 131.7 371 29.4
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 5.5e-26 123.2 81 67.9
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 8.8e-16 89.4 362 26.0
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 2.6e-15 87.8 447 24.2
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 2.8e-14 84.3 57 70.2
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 9.7e-07 59.3 54 51.9
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 1.7e-06 58.5 199 28.1


User provided reference genes

Program Settings