Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 1.1e-56 223.8 181 100.0
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 3.1e-56 222.2 181 93.9
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 7.3e-29 131.3 180 56.1
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 6.8e-27 124.8 189 56.6
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 1.5e-26 123.6 188 45.7
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 2.0e-26 123.2 182 59.9
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 2.6e-26 122.9 187 59.4
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 7.5e-26 121.3 183 51.4
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 1.7e-25 120.2 190 44.2
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 2.2e-25 119.8 185 57.8
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.2e-25 119.8 185 51.9
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 4.9e-25 118.6 189 56.6
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.4e-24 116.3 185 56.8
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 4.1e-24 115.5 190 54.7
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 7.0e-24 114.8 192 57.3
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 9.2e-24 114.4 194 42.3
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 9.2e-24 114.4 185 56.8
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 2.7e-23 112.8 184 58.7
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 6.0e-23 111.7 187 58.3
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 7.8e-23 111.3 195 47.2
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 1.0e-22 110.9 195 54.9
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 1.0e-22 110.9 186 52.7
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.0e-22 110.9 192 47.9
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 1.3e-22 110.5 184 58.2
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 1.7e-22 110.2 188 55.9
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.7e-22 110.2 185 54.6
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 2.3e-22 109.8 194 52.6
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 3.9e-22 109.0 190 57.4
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 5.1e-22 108.6 184 48.4
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 6.6e-22 108.2 181 55.2
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 8.6e-22 107.8 189 55.6
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 8.6e-22 107.8 189 55.6
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 1.1e-21 107.5 187 56.1
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.1e-21 107.5 189 55.6
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.5e-21 107.1 144 44.4
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 3.3e-21 105.9 180 57.8
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 3.3e-21 105.9 187 51.9
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 3.3e-21 105.9 181 54.7
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 4.3e-21 105.5 188 42.0
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 4.3e-21 105.5 191 52.4
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 5.6e-21 105.1 185 54.6
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 5.6e-21 105.1 190 47.4
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 7.3e-21 104.8 184 56.5
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 7.3e-21 104.8 185 53.5
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 9.5e-21 104.4 188 41.5
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 9.5e-21 104.4 181 39.8
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 1.2e-20 104.0 180 48.3
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.6e-20 103.6 188 45.7
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.1e-20 103.2 181 39.2
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 2.8e-20 102.8 175 38.9
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 3.6e-20 102.4 192 53.1
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 6.2e-20 101.7 181 46.4
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 8.1e-20 101.3 188 41.0
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 8.1e-20 101.3 182 55.5
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 5.2e-19 98.6 187 40.6
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 5.2e-19 98.6 171 55.6
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 6.8e-19 98.2 175 53.7
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 1.2e-18 97.4 182 51.6
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 1.2e-18 97.4 181 51.4
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 1.2e-18 97.4 173 53.2
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 1.2e-18 97.4 177 55.9
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 1.5e-18 97.1 137 58.4
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 2.0e-18 96.7 187 40.1
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 2.0e-18 96.7 187 40.1
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 2.6e-18 96.3 185 51.4
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 3.4e-18 95.9 187 39.6
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 3.4e-18 95.9 180 53.9
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.4e-18 95.9 144 47.9
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 3.4e-18 95.9 167 57.5
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 3.4e-18 95.9 176 53.4
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 4.4e-18 95.5 184 47.3
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 4.4e-18 95.5 180 54.4
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 5.8e-18 95.1 184 40.2
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 7.5e-18 94.7 186 50.5
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 1.3e-17 94.0 180 53.9
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.3e-17 94.0 177 53.1
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 1.7e-17 93.6 181 51.4
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 1.7e-17 93.6 181 51.4
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 2.9e-17 92.8 180 45.6
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 2.9e-17 92.8 182 52.7
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 2.9e-17 92.8 180 52.2
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 3.7e-17 92.4 191 36.6
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 4.9e-17 92.0 177 52.5
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 6.4e-17 91.7 190 36.3
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 6.4e-17 91.7 181 47.0
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 6.4e-17 91.7 137 56.9
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 6.4e-17 91.7 182 52.2
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 6.4e-17 91.7 93 83.9
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 1.1e-16 90.9 182 50.0
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 1.1e-16 90.9 180 51.7
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 2.4e-16 89.7 182 37.9
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 2.4e-16 89.7 182 37.9
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 2.4e-16 89.7 185 62.7
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 2.4e-16 89.7 184 51.6
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 2.4e-16 89.7 181 53.0
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 3.2e-16 89.4 187 54.0
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 3.2e-16 89.4 174 49.4
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 5.4e-16 88.6 180 38.9
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 7.1e-16 88.2 181 37.6
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 7.1e-16 88.2 183 53.0
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 9.2e-16 87.8 129 48.1
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 9.2e-16 87.8 186 52.2
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 1.6e-15 87.0 180 51.7
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 2.7e-15 86.3 129 46.5
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 2.7e-15 86.3 186 52.7
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 3.5e-15 85.9 87 51.7
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 4.6e-15 85.5 87 51.7
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 7.8e-15 84.7 174 47.1
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 1.0e-14 84.3 87 50.6
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 1.3e-14 84.0 176 36.9
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 1.3e-14 84.0 176 36.9
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 1.3e-14 84.0 176 36.9
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 1.7e-14 83.6 182 37.4
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 2.3e-14 83.2 167 51.5
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 5.1e-14 82.0 153 35.9
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 8.6e-14 81.3 178 46.6
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.1e-13 80.9 183 50.3
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 1.1e-13 80.9 181 33.1
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 9.6e-13 77.8 142 38.7
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 1.6e-12 77.0 146 40.4
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 2.1e-12 76.6 93 44.1
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 4.0e-11 72.4 175 35.4
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 6.8e-11 71.6 146 37.0
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 1.5e-10 70.5 187 50.3
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 2.6e-10 69.7 133 40.6
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 2.6e-10 69.7 185 48.1
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 5.8e-10 68.6 184 46.2
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.3e-09 67.4 84 48.8
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 4.9e-09 65.5 85 45.9
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 1.1e-08 64.3 250 39.6
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.4e-08 63.9 188 44.1
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 9.3e-08 61.2 86 44.2
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 2.7e-07 59.7 88 67.0
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 1.0e-06 57.8 123 39.0
Lj9P479T20 Lonicera japonica HOM05D005335 ORTHO05D006472 3.9e-06 55.8 69 84.1


User provided reference genes

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