Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2520 Papaver somniferum HOM05D005744 ORTHO05D007503 6.3e-219 763.8 392 100.0
PSO782G2798 Papaver somniferum HOM05D005744 ORTHO05D007503 1.6e-182 642.9 337 93.5
PSO801G0019 Papaver somniferum HOM05D005744 ORTHO05D007503 5.9e-169 597.8 344 84.9
PSO339G3552 Papaver somniferum HOM05D005744 ORTHO05D007503 1.0e-168 597.0 334 88.3
Nn3g16475 Nelumbo nucifera HOM05D005744 ORTHO05D007503 2.0e-140 503.1 331 71.9
GSVIVG01008538001 Vitis vinifera HOM05D005744 ORTHO05D007503 7.1e-138 494.6 339 70.5
Aqoxy3G01542 Aquilegia oxysepala HOM05D005744 ORTHO05D007503 1.7e-136 490.0 337 69.7
TAR629G2476 Trochodendron aralioides HOM05D005744 ORTHO05D007503 7.3e-135 484.6 336 69.3
Atru.chr9.1122 Acer truncatum HOM05D005744 ORTHO05D007503 3.6e-134 482.3 337 69.1
Ciclev10020324m.g Citrus clementina HOM05D005744 ORTHO05D007503 4.0e-133 478.8 331 68.0
COL.COLO4_28103 Corchorus olitorius HOM05D005744 ORTHO05D007503 9.0e-133 477.6 336 69.9
Potri.015G095400 Populus trichocarpa HOM05D005744 ORTHO05D007503 3.4e-132 475.7 335 67.5
PGR044G2189 Punica granatum HOM05D005744 ORTHO05D007503 4.5e-132 475.3 346 65.9
Manes.14G051500 Manihot esculenta HOM05D005744 ORTHO05D007503 1.3e-131 473.8 335 69.0
Sabra15G0116400 Salix brachista HOM05D005744 ORTHO05D007503 7.1e-130 468.0 344 65.1
arahy.Tifrunner.gnm1.ann1.SJIN4P Arachis hypogaea HOM05D005744 ORTHO05D007503 9.3e-130 467.6 335 66.0
CSS0041302 Camellia sinensis var. sinensis HOM05D005744 ORTHO05D007503 9.3e-130 467.6 338 65.7
THA.LOC104825016 Tarenaya hassleriana HOM05D005744 ORTHO05D007503 9.3e-130 467.6 329 68.1
Prupe.5G151700 Prunus persica HOM05D005744 ORTHO05D007503 1.2e-129 467.2 349 64.5
Gorai.008G206000 Gossypium raimondii HOM05D005744 ORTHO05D007503 1.6e-129 466.8 331 66.8
Thecc.03G128600 Theobroma cacao HOM05D005744 ORTHO05D007503 1.6e-129 466.8 337 65.9
Gohir.A12G189400 Gossypium hirsutum HOM05D005744 ORTHO05D007503 3.5e-129 465.7 331 66.8
MD14G1157700 Malus domestica HOM05D005744 ORTHO05D007503 7.9e-129 464.5 337 65.6
Oeu010732.1 Olea europaea HOM05D005744 ORTHO05D007503 7.9e-129 464.5 343 65.9
Gohir.D12G191700 Gossypium hirsutum HOM05D005744 ORTHO05D007503 1.0e-128 464.2 331 66.2
Sed0005313 Sechium edule HOM05D005744 ORTHO05D007503 1.3e-128 463.8 346 65.9
HanXRQChr16g0498211 Helianthus annuus HOM05D005744 ORTHO05D007503 1.8e-128 463.4 330 65.2
CiPaw.11G008100 Carya illinoinensis HOM05D005744 ORTHO05D007503 3.9e-128 462.2 341 64.8
HPP92_020223 Vanilla planifolia HOM05D005744 ORTHO05D007503 3.9e-128 462.2 345 63.2
Lsat_1_v5_gn_4_80081 Lactuca sativa HOM05D005744 ORTHO05D007503 5.1e-128 461.8 329 66.0
Actinidia25578 Actinidia chinensis HOM05D005744 ORTHO05D007503 6.7e-128 461.5 331 67.7
arahy.Tifrunner.gnm1.ann1.DQ5P63 Arachis hypogaea HOM05D005744 ORTHO05D007503 1.5e-127 460.3 335 65.7
ATR0561G060 Amborella trichopoda HOM05D005744 ORTHO05D007503 5.6e-127 458.4 333 66.1
ClCG06G017860 Citrullus lanatus HOM05D005744 ORTHO05D007503 5.6e-127 458.4 342 64.3
CARHR232280 Cardamine hirsuta HOM05D005744 ORTHO05D007503 9.6e-127 457.6 335 63.6
BraA03t14628Z Brassica rapa HOM05D005744 ORTHO05D007503 1.6e-126 456.8 335 63.9
Cc08_g16880 Coffea canephora HOM05D005744 ORTHO05D007503 1.6e-126 456.8 341 64.8
QL10p003203 Quercus lobata HOM05D005744 ORTHO05D007503 1.6e-126 456.8 341 66.9
Lalb_Chr08g0237111 Lupinus albus HOM05D005744 ORTHO05D007503 3.6e-126 455.7 335 64.8
MELO3C026209.2 Cucumis melo HOM05D005744 ORTHO05D007503 8.1e-126 454.5 345 63.8
A03p55610 Brassica napus HOM05D005744 ORTHO05D007503 1.4e-125 453.8 335 63.3
BcaC06g32852 Brassica carinata HOM05D005744 ORTHO05D007503 3.1e-125 452.6 335 62.7
BolC7t45875H Brassica oleracea HOM05D005744 ORTHO05D007503 3.1e-125 452.6 335 62.7
ECA232G3603 Erigeron canadensis HOM05D005744 ORTHO05D007503 3.1e-125 452.6 330 65.8
AL7G28320 Arabidopsis lyrata HOM05D005744 ORTHO05D007503 4.0e-125 452.2 329 65.0
MSTRG.13706 Avicennia marina HOM05D005744 ORTHO05D007503 5.3e-125 451.8 337 64.7
Cfa018827 Carpinus fangiana HOM05D005744 ORTHO05D007503 5.3e-125 451.8 343 65.3
Nitab4.5_0002720g0090 Nicotiana tabacum HOM05D005744 ORTHO05D007503 1.2e-124 450.7 348 64.1
Peaxi162Scf00074g00136 Petunia axillaris HOM05D005744 ORTHO05D007503 1.2e-124 450.7 337 64.1
Ca_24503_v3 Cicer arietinum L. HOM05D005744 ORTHO05D007503 1.5e-124 450.3 336 66.7
CsaV3_1G000590 Cucumis sativus L. HOM05D005744 ORTHO05D007503 1.5e-124 450.3 345 63.2
Carub.0007s1619 Capsella rubella HOM05D005744 ORTHO05D007503 2.6e-124 449.5 329 64.4
DCAR_021616 Daucus carota HOM05D005744 ORTHO05D007503 2.6e-124 449.5 343 63.3
Psat5g140680 Pisum sativum HOM05D005744 ORTHO05D007503 3.4e-124 449.1 335 64.5
C07p53850 Brassica napus HOM05D005744 ORTHO05D007503 4.5e-124 448.7 335 62.4
Thhalv10025348m.g Eutrema salsugineum HOM05D005744 ORTHO05D007503 4.5e-124 448.7 335 61.5
AT4G24880 Arabidopsis thaliana HOM05D005744 ORTHO05D007503 5.8e-124 448.4 329 64.1
CANSAT80G0573 Cannabis sativa HOM05D005744 ORTHO05D007503 9.9e-124 447.6 337 63.2
Migut.E00304 Erythranthe guttata HOM05D005744 ORTHO05D007503 9.9e-124 447.6 338 64.2
EL10As4g23384 Beta vulgaris HOM05D005744 ORTHO05D007503 1.7e-123 446.8 340 63.8
Medtr3g074980 Medicago truncatula HOM05D005744 ORTHO05D007503 1.7e-123 446.8 336 64.9
Sp7g22860 Schrenkiella parvula HOM05D005744 ORTHO05D007503 2.9e-123 446.0 335 61.8
Rhsim08G0189700 Rhododendron simsii HOM05D005744 ORTHO05D007503 1.1e-122 444.1 331 66.5
RhsimUnG0231400 Rhododendron simsii HOM05D005744 ORTHO05D007503 1.4e-122 443.7 331 66.5
Lj1g0015277 Lotus japonicus HOM05D005744 ORTHO05D007503 2.4e-122 443.0 366 60.7
PGSC0003DMG400012114 Solanum tuberosum HOM05D005744 ORTHO05D007503 9.3e-122 441.0 343 62.7
Solyc08g083260.3 Solanum lycopersicum HOM05D005744 ORTHO05D007503 2.1e-121 439.9 342 62.6
CDE05G2332 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 2.7e-121 439.5 327 62.7
Actinidia33099 Actinidia chinensis HOM05D005744 ORTHO05D007503 4.6e-121 438.7 265 74.0
Cpa.g.sc2981.2 Carica papaya HOM05D005744 ORTHO05D007503 6.0e-121 438.3 304 68.8
Sopen08g031450 Solanum pennellii HOM05D005744 ORTHO05D007503 6.0e-121 438.3 342 62.6
AUR62029618 Chenopodium quinoa HOM05D005744 ORTHO05D007503 1.3e-120 437.2 339 61.9
AUR62025939 Chenopodium quinoa HOM05D005744 ORTHO05D007503 3.0e-120 436.0 344 61.6
Phvul.009G166600 Phaseolus vulgaris HOM05D005744 ORTHO05D007503 3.9e-120 435.6 345 64.3
VMungo1309G1043 Vigna mungo HOM05D005744 ORTHO05D007503 6.7e-120 434.9 341 65.1
TPR.G26152 Trifolium pratense HOM05D005744 ORTHO05D007503 1.9e-119 433.3 336 63.1
MBI07_g31012_MAGBIO Magnolia biondii HOM05D005744 ORTHO05D007503 1.3e-118 430.6 336 65.5
SalBow5G0293 Salvia bowleyana HOM05D005744 ORTHO05D007503 3.7e-118 429.1 337 64.1
Glyma.06G170500 Glycine max HOM05D005744 ORTHO05D007503 4.8e-118 428.7 335 62.7
Eucgr.K02730 Eucalyptus grandis HOM05D005744 ORTHO05D007503 8.1e-118 427.9 358 61.7
Lj9A478G92 Lonicera japonica HOM05D005744 ORTHO05D007503 4.0e-117 425.6 341 61.9
RcHm_v2.0_Chr7g0190291 Rosa chinensis HOM05D005744 ORTHO05D007503 1.5e-116 423.7 335 61.2
vmacro19203 Vaccinium macrocarpon HOM05D005744 ORTHO05D007503 5.8e-116 421.8 362 57.5
Ah.02g114920 Amaranthus hybridus HOM05D005744 ORTHO05D007503 1.1e-114 417.5 390 55.9
Os01g0101300 Oryza sativa ssp. japonica HOM05D005744 ORTHO05D007503 2.5e-114 416.4 328 62.2
FAN13G0489 Fragaria x ananassa HOM05D005744 ORTHO05D007503 4.2e-114 415.6 352 59.4
TPR.G12158 Trifolium pratense HOM05D005744 ORTHO05D007503 7.1e-114 414.8 336 63.1
TAR633G0019 Trochodendron aralioides HOM05D005744 ORTHO05D007503 7.1e-114 414.8 257 72.0
FAN18G3767 Fragaria x ananassa HOM05D005744 ORTHO05D007503 2.1e-113 413.3 335 60.6
FvH4_5g08230 Fragaria vesca HOM05D005744 ORTHO05D007503 2.7e-113 412.9 335 60.6
FAN08G2910 Fragaria x ananassa HOM05D005744 ORTHO05D007503 3.9e-112 409.1 335 59.4
Haze_07221 Corylus avellana HOM05D005744 ORTHO05D007503 5.1e-112 408.7 405 54.1
Duzib205G1133 Durio zibethinus HOM05D005744 ORTHO05D007503 3.3e-111 406.0 337 59.6
CAN.G567.98 Capsicum annuum HOM05D005744 ORTHO05D007503 1.6e-110 403.7 316 61.7
Dinv11169 Davidia involucrata HOM05D005744 ORTHO05D007503 6.9e-109 398.3 341 60.1
Mapoly0024s0037 Marchantia polymorpha HOM05D005744 ORTHO05D007503 7.2e-106 388.3 329 56.2
Zm00001eb354570 Zea mays HOM05D005744 ORTHO05D007503 4.3e-103 379.0 246 68.3
RcHm_v2.0_Chr4g0409241 Rosa chinensis HOM05D005744 ORTHO05D007503 7.4e-103 378.3 337 56.7
SGA_v2.0_scaffold22G09828 Striga asiatica HOM05D005744 ORTHO05D007503 1.2e-100 370.9 318 57.9
Aa31LG7G10960 Aethionema arabicum HOM05D005744 ORTHO05D007503 2.9e-99 366.3 215 75.8
Sc04g0000680 Simmondsia chinensis HOM05D005744 ORTHO05D007503 2.9e-99 366.3 215 74.9
SEGI_05259 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 8.5e-99 364.8 316 58.5
Glyma.04G195500 Glycine max HOM05D005744 ORTHO05D007503 4.2e-98 362.5 230 70.9
Pp3c8_11540 Physcomitrium patens HOM05D005744 ORTHO05D007503 5.5e-98 362.1 340 50.0
FAN12G3536 Fragaria x ananassa HOM05D005744 ORTHO05D007503 2.6e-95 353.2 316 56.3
FvH4_4g11820 Fragaria vesca HOM05D005744 ORTHO05D007503 1.8e-93 347.1 325 55.1
FAN07G2643 Fragaria x ananassa HOM05D005744 ORTHO05D007503 1.5e-92 344.0 257 63.8
FAN12G3591 Fragaria x ananassa HOM05D005744 ORTHO05D007503 7.7e-92 341.7 288 58.3
SMO364G0648 Selaginella moellendorffii HOM05D005744 ORTHO05D007503 2.5e-90 336.7 335 50.7
Nitab4.5_0000479g0030 Nicotiana tabacum HOM05D005744 ORTHO05D007503 1.2e-89 334.3 278 60.4
unitig_27.g25288 Utricularia gibba HOM05D005744 ORTHO05D007503 6.3e-86 322.0 337 49.6
SalBow5G5674 Salvia bowleyana HOM05D005744 ORTHO05D007503 8.0e-81 305.1 337 50.4
SEGI_21905 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 7.0e-77 292.0 183 67.8
Eucgr.L02977 Eucalyptus grandis HOM05D005744 ORTHO05D007503 6.5e-75 285.4 278 57.6
SHI06365 Sapria himalayana HOM05D005744 ORTHO05D007503 2.7e-60 236.9 377 38.2
MCO07G390 Micromonas commoda HOM05D005744 ORTHO05D007503 1.5e-58 231.1 362 37.0
PRCOL_00001155 Prasinoderma coloniale HOM05D005744 ORTHO05D007503 9.8e-47 191.8 289 37.7
AagrBONN_evm.TU.Sc2ySwM_344.2997 Anthoceros agrestis HOM05D005744 ORTHO05D007503 1.4e-45 188.0 141 53.9
Lsat_1_v5_gn_8_77640 Lactuca sativa HOM05D005744 ORTHO05D007503 1.9e-45 187.6 128 68.8
RcHm_v2.0_Chr4g0407951 Rosa chinensis HOM05D005744 ORTHO05D007503 5.4e-45 186.0 255 43.1
Cre16.g666000 Chlamydomonas reinhardtii HOM05D005744 ORTHO05D007503 3.6e-41 173.3 489 27.8
HanXRQChr10g0289761 Helianthus annuus HOM05D005744 ORTHO05D007503 7.1e-37 159.1 109 62.4
CDE12G0192 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 1.5e-23 114.8 144 46.5
RcHm_v2.0_Chr4g0407901 Rosa chinensis HOM05D005744 ORTHO05D007503 3.2e-21 107.1 154 42.2
Aa31LG7G10970 Aethionema arabicum HOM05D005744 ORTHO05D007503 2.1e-20 104.4 122 49.2
Lsat_1_v5_gn_8_150141 Lactuca sativa HOM05D005744 ORTHO05D048266 1.8e-11 74.7 58 58.6
CDE05G3540 Ceratophyllum demersum HOM05D005744 ORTHO05D130478 3.4e-07 60.5 98 39.8
COL.COLO4_31215 Corchorus olitorius HOM05D005744 ORTHO05D007503 2.9e-06 57.4 42 54.8


User provided reference genes

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