Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 3.1e-223 778.1 384 100.0
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 4.4e-217 757.7 384 97.1
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 3.5e-174 615.1 346 85.3
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 3.0e-173 612.1 371 79.5
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 1.1e-172 610.1 369 80.2
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 7.4e-172 607.4 367 79.8
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 9.6e-172 607.1 370 78.9
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 1.3e-171 606.7 367 79.0
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 1.6e-171 606.3 346 84.4
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 2.1e-171 605.9 367 78.7
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 2.8e-171 605.5 362 79.3
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 3.6e-171 605.1 356 81.2
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.1e-170 603.6 370 78.1
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.1e-170 603.6 370 78.1
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 4.0e-170 601.7 375 77.3
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 5.8e-169 597.8 367 77.4
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 1.7e-168 596.3 387 75.5
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 8.4e-168 594.0 367 78.5
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 8.4e-168 594.0 366 78.7
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 8.4e-168 594.0 347 81.8
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 1.4e-167 593.2 345 81.4
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 1.4e-167 593.2 366 77.9
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 1.4e-167 593.2 366 77.9
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 1.9e-167 592.8 356 78.7
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 2.4e-167 592.4 364 77.5
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 3.2e-167 592.0 369 77.0
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 4.2e-167 591.7 370 75.1
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 7.1e-167 590.9 384 76.6
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 1.2e-166 590.1 366 76.8
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 1.6e-166 589.7 373 75.9
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 2.7e-166 589.0 370 76.5
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 2.7e-166 589.0 373 75.6
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 3.5e-166 588.6 347 81.3
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 3.5e-166 588.6 347 79.8
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 4.6e-166 588.2 347 81.3
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 4.6e-166 588.2 368 76.6
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 7.9e-166 587.4 348 78.2
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 7.9e-166 587.4 344 81.7
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 1.0e-165 587.0 347 79.3
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 3.0e-165 585.5 375 75.2
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 5.1e-165 584.7 345 80.6
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 6.7e-165 584.3 366 76.5
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 6.7e-165 584.3 368 76.4
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 8.7e-165 583.9 367 75.7
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 1.1e-164 583.6 367 75.2
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 1.1e-164 583.6 367 75.7
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 1.1e-164 583.6 344 79.9
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 1.1e-164 583.6 346 80.1
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 1.1e-164 583.6 367 76.8
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 1.1e-164 583.6 346 80.3
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 1.5e-164 583.2 363 76.0
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 2.5e-164 582.4 367 76.0
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 3.3e-164 582.0 372 74.7
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 4.3e-164 581.6 345 79.7
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 4.3e-164 581.6 375 74.4
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 5.6e-164 581.3 375 74.7
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 7.4e-164 580.9 374 74.3
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 7.4e-164 580.9 375 74.9
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 7.4e-164 580.9 345 80.0
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 7.4e-164 580.9 345 79.4
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 7.4e-164 580.9 342 80.7
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 9.6e-164 580.5 377 73.7
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 9.6e-164 580.5 371 75.2
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 9.6e-164 580.5 373 75.1
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 2.1e-163 579.3 347 79.5
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 2.8e-163 578.9 374 75.4
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 2.8e-163 578.9 342 81.0
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 3.7e-163 578.6 344 79.4
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 4.8e-163 578.2 362 76.8
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 4.8e-163 578.2 368 75.5
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 8.1e-163 577.4 370 75.4
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 8.1e-163 577.4 348 79.3
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 1.1e-162 577.0 362 76.2
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 1.1e-162 577.0 367 74.4
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.8e-162 576.2 346 79.2
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 5.3e-162 574.7 348 78.2
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 6.9e-162 574.3 359 77.4
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 6.9e-162 574.3 345 80.0
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 6.9e-162 574.3 364 76.6
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 4.5e-161 571.6 342 80.7
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 1.3e-160 570.1 342 78.4
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 1.3e-160 570.1 342 78.9
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 1.7e-160 569.7 376 72.9
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 2.2e-160 569.3 364 74.5
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 8.4e-160 567.4 342 79.2
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.5e-159 565.8 397 70.3
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 3.2e-159 565.5 365 75.3
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 4.2e-159 565.1 342 78.1
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 5.5e-159 564.7 342 78.4
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 1.2e-158 563.5 359 76.6
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 3.5e-158 562.0 342 78.7
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 6.0e-158 561.2 338 79.0
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 7.9e-158 560.8 358 74.9
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 7.9e-158 560.8 342 77.2
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 6.7e-157 557.8 468 60.9
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 1.3e-155 553.5 347 76.9
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 1.0e-152 543.9 480 59.2
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 1.3e-152 543.5 364 72.3
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 8.4e-152 540.8 345 75.7
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 3.9e-149 531.9 382 68.6
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 2.4e-146 522.7 360 69.4
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 7.7e-145 517.7 386 67.1
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 6.5e-144 514.6 363 71.3
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 8.8e-141 504.2 305 79.3
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 9.7e-140 500.7 343 70.0
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 2.0e-137 493.0 354 68.9
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 7.7e-137 491.1 340 68.8
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 7.7e-137 491.1 340 69.4
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 2.3e-133 479.6 361 68.1
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 1.1e-130 470.7 326 67.2
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 5.0e-128 461.8 271 82.3
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 4.5e-121 438.7 256 81.2
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.3e-120 437.2 260 78.8
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 1.0e-117 427.6 408 56.4
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 6.3e-115 418.3 315 67.6
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 3.1e-114 416.0 315 67.0
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 3.5e-113 412.5 340 59.1
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 1.7e-107 393.7 228 82.5
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 2.2e-107 393.3 368 57.6
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 1.8e-106 390.2 340 55.6
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 3.5e-105 386.0 233 76.4
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 1.8e-101 373.6 245 73.5
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 2.4e-98 363.2 355 56.1
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 7.3e-95 351.7 340 52.1
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 8.9e-93 344.7 358 51.1
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 5.8e-92 342.0 254 69.3
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 7.0e-90 335.1 211 76.8
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 2.7e-89 333.2 190 84.2
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 1.1e-74 284.6 176 75.6
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 4.0e-69 266.2 222 63.1
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 1.9e-63 247.3 152 77.0
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 9.9e-60 235.0 140 80.0
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 6.7e-48 195.7 118 74.6
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 9.6e-47 191.8 346 35.8
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 1.6e-46 191.0 118 72.0
TPR.G7356 Trifolium pratense HOM05D005273 ORTHO05D006195 6.0e-41 172.6 94 87.2
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 1.9e-39 167.5 99 80.8
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 3.3e-39 166.8 242 45.0
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 2.4e-37 160.6 357 32.8
Lj3g0005703 Lotus japonicus HOM05D002777 ORTHO05D001516 4.4e-23 113.2 81 72.8
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 4.8e-22 109.8 261 33.0
AUR62041872 Chenopodium quinoa HOM05D005273 ORTHO05D006195 4.1e-21 106.7 95 55.8
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 9.1e-21 105.5 171 40.9
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 5.5e-18 96.3 87 57.5
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 2.0e-12 77.8 45 77.8
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 1.4e-08 65.1 39 69.2


User provided reference genes

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