Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 2.3e-133 478.8 220 100.0
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 1.5e-132 476.1 220 98.6
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 1.1e-98 363.6 225 72.9
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 3.8e-96 355.1 225 71.1
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 6.4e-96 354.4 223 72.2
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 7.1e-95 350.9 224 72.3
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 9.3e-95 350.5 266 63.5
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 2.1e-91 339.3 225 68.4
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 2.8e-91 339.0 224 71.0
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 1.8e-90 336.3 221 67.9
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 2.4e-90 335.9 222 71.2
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 9.0e-90 334.0 224 69.2
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 1.5e-89 333.2 214 67.8
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 1.5e-89 333.2 218 69.7
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 2.0e-89 332.8 217 70.5
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 5.8e-89 331.3 220 69.1
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 5.8e-89 331.3 219 68.0
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 7.6e-89 330.9 221 68.8
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 1.3e-88 330.1 227 67.8
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 4.9e-88 328.2 218 67.4
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 6.4e-88 327.8 219 70.3
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 6.4e-88 327.8 219 69.4
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 6.4e-88 327.8 222 66.2
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 1.1e-87 327.0 223 66.4
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.9e-87 326.2 221 66.5
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 2.4e-87 325.9 220 66.4
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 2.4e-87 325.9 223 66.8
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 7.1e-87 324.3 234 63.7
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 9.3e-87 323.9 219 69.9
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 1.6e-86 323.2 225 65.8
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 2.1e-86 322.8 221 66.1
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 2.1e-86 322.8 224 66.5
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 2.7e-86 322.4 222 67.6
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.7e-86 322.4 222 65.8
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.7e-86 322.4 222 65.8
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 3.5e-86 322.0 223 66.8
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 1.8e-85 319.7 220 65.9
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 1.8e-85 319.7 224 63.8
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.8e-85 319.7 217 65.0
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 3.0e-85 318.9 212 66.5
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 3.0e-85 318.9 220 65.5
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 3.0e-85 318.9 220 65.5
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 6.7e-85 317.8 219 66.7
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 6.7e-85 317.8 219 66.7
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 8.7e-85 317.4 215 66.0
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 1.5e-84 316.6 225 65.3
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 1.5e-84 316.6 225 65.3
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.5e-84 315.8 227 65.2
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 3.3e-84 315.5 223 65.0
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 1.6e-83 313.2 217 64.5
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.6e-83 313.2 225 63.6
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.1e-83 312.8 227 64.8
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 2.8e-83 312.4 219 65.8
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 4.8e-83 311.6 219 65.3
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 4.8e-83 311.6 222 64.9
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 6.2e-83 311.2 226 64.6
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 8.1e-83 310.8 225 63.1
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 8.1e-83 310.8 230 65.2
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 1.1e-82 310.5 220 64.5
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 1.4e-82 310.1 227 63.4
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 5.3e-82 308.1 219 66.7
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 6.9e-82 307.8 221 64.3
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 6.9e-82 307.8 228 62.7
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 2.0e-81 306.2 225 65.3
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.0e-81 306.2 221 63.8
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 2.6e-81 305.8 225 63.1
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 3.4e-81 305.4 220 64.1
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 5.8e-81 304.7 219 66.2
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 5.8e-81 304.7 295 53.6
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 5.8e-81 304.7 221 64.3
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 3.8e-80 302.0 223 62.3
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 9.3e-79 297.4 188 72.3
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 1.2e-78 297.0 218 61.5
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 4.6e-78 295.0 221 64.3
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 1.3e-77 293.5 232 59.5
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.3e-77 293.5 244 58.2
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 1.3e-77 293.5 214 59.8
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 8.7e-77 290.8 216 62.5
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.3e-75 287.0 233 58.4
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.3e-75 287.0 191 68.6
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.8e-75 285.8 189 68.8
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 1.8e-74 283.1 262 51.9
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.4e-74 282.7 189 67.7
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 6.9e-74 281.2 183 69.9
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 9.0e-74 280.8 190 66.8
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 5.9e-73 278.1 200 68.0
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 7.6e-73 277.7 192 64.1
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 6.5e-72 274.6 186 68.3
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 2.5e-71 272.7 185 65.4
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 7.2e-71 271.2 193 63.2
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 1.6e-70 270.0 178 66.3
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 3.6e-70 268.9 178 66.3
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.0e-69 267.3 184 65.2
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 1.0e-69 267.3 180 67.2
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 2.3e-69 266.2 189 64.0
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 2.3e-69 266.2 219 61.2
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 3.9e-69 265.4 184 65.8
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 6.7e-69 264.6 185 66.5
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 6.7e-69 264.6 178 65.2
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 9.7e-68 260.8 187 65.2
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 9.7e-68 260.8 187 65.2
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 6.3e-67 258.1 224 58.9
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 6.3e-67 258.1 218 57.8
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 6.3e-67 258.1 218 57.8
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 6.3e-67 258.1 190 63.2
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 8.2e-67 257.7 211 55.9
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 5.9e-65 251.5 184 61.4
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 8.5e-64 247.7 214 58.4
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 4.6e-62 241.9 191 59.7
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 1.2e-54 217.2 192 51.6
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 2.1e-54 216.5 219 45.7
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 7.4e-52 208.0 140 68.6
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 2.4e-50 203.0 139 65.5
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 5.2e-45 185.3 132 64.4
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 8.8e-37 157.9 84 75.0
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 1.1e-31 141.0 72 73.6
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.4e-18 97.4 184 33.7
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 2.0e-09 67.0 62 41.9


User provided reference genes

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