Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 1.1e-198 696.4 339 100.0
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 1.3e-191 672.9 339 96.5
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 3.1e-150 535.4 342 77.2
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 1.6e-146 523.1 345 73.3
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 1.4e-145 520.0 336 74.7
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 2.0e-144 516.2 344 71.8
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 3.7e-143 511.9 341 72.1
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 4.1e-142 508.4 337 73.6
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 9.1e-142 507.3 307 76.9
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 1.6e-141 506.5 317 74.1
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 7.7e-141 504.2 337 71.8
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 1.3e-140 503.4 340 70.9
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.3e-140 502.7 308 76.6
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 8.6e-140 500.7 341 71.3
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.1e-139 500.4 336 71.4
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 1.9e-139 499.6 337 72.7
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 2.5e-139 499.2 333 73.3
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 3.3e-139 498.8 305 76.4
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 4.2e-139 498.4 337 71.2
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 7.2e-139 497.7 343 70.6
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 1.6e-138 496.5 338 71.0
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 1.4e-137 493.4 335 71.0
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 1.8e-137 493.0 340 71.2
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 1.8e-137 493.0 286 77.6
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 1.8e-137 493.0 337 70.9
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 3.0e-137 492.3 343 68.8
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 3.0e-137 492.3 288 79.5
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 6.8e-137 491.1 337 70.6
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 1.5e-136 490.0 340 70.6
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 1.5e-136 490.0 343 68.2
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 2.6e-136 489.2 343 68.5
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 2.8e-135 485.7 333 69.1
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 3.1e-134 482.3 331 69.5
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 4.5e-133 478.4 331 69.2
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 5.9e-133 478.0 288 78.1
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 5.9e-133 478.0 336 69.9
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 7.8e-133 477.6 328 70.4
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 1.7e-132 476.5 330 68.8
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 1.7e-132 476.5 286 76.6
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 2.9e-132 475.7 284 76.1
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 3.8e-132 475.3 288 75.7
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.1e-131 473.8 332 69.3
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.9e-131 473.0 345 66.4
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 2.5e-131 472.6 288 75.0
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 5.6e-131 471.5 332 69.0
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 9.5e-131 470.7 336 68.5
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 9.5e-131 470.7 286 77.3
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 9.5e-131 470.7 328 68.3
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.2e-130 470.3 289 73.7
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 2.1e-130 469.5 285 77.5
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 2.1e-130 469.5 284 76.8
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 2.8e-130 469.2 287 73.5
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 3.6e-130 468.8 309 69.9
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 3.6e-130 468.8 287 76.0
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 4.7e-130 468.4 325 69.5
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 8.0e-130 467.6 326 69.9
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 1.4e-129 466.8 317 70.7
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 1.8e-129 466.5 284 76.8
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 4.0e-129 465.3 336 68.2
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 6.8e-129 464.5 337 68.0
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 6.8e-129 464.5 299 69.6
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 8.9e-129 464.2 341 66.6
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 8.9e-129 464.2 281 77.9
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 2.6e-128 462.6 287 76.0
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 2.6e-128 462.6 311 69.5
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 5.8e-128 461.5 337 67.4
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 5.8e-128 461.5 328 68.9
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 7.5e-128 461.1 309 71.2
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 7.5e-128 461.1 331 69.5
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 1.7e-127 459.9 304 72.7
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 2.2e-127 459.5 285 75.8
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 2.4e-126 456.1 331 68.6
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 4.1e-126 455.3 301 72.1
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 6.0e-125 451.4 330 66.4
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 6.0e-125 451.4 330 66.4
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.3e-124 450.3 321 66.7
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 1.5e-120 436.8 359 62.7
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 4.4e-120 435.3 284 69.4
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 2.2e-119 433.0 271 72.7
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 2.9e-119 432.6 325 64.0
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 3.9e-116 422.2 348 62.9
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 2.5e-115 419.5 282 68.1
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 3.3e-115 419.1 289 69.9
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 2.3e-113 412.9 248 77.4
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 1.2e-112 410.6 286 68.5
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 1.9e-110 403.3 287 62.0
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 1.9e-110 403.3 286 63.6
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 5.4e-110 401.7 248 74.6
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 1.0e-108 397.5 306 63.7
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 6.6e-108 394.8 244 75.4
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 4.3e-107 392.1 335 58.2
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 6.2e-106 388.3 245 72.2
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 3.8e-103 379.0 287 58.9
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 5.6e-99 365.2 318 58.5
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 6.9e-97 358.2 252 70.2
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 3.4e-96 355.9 285 56.8
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 8.7e-84 314.7 195 74.9
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 1.1e-75 287.7 309 48.5
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 6.5e-71 271.9 152 80.9
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 1.3e-58 231.1 144 75.0
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 3.7e-50 203.0 109 80.7
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 4.1e-49 199.5 115 73.0
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 9.1e-49 198.4 120 77.5
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 4.2e-46 189.5 105 83.8
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 9.1e-41 171.8 115 72.2
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 1.6e-40 171.0 283 35.7
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 9.7e-35 151.8 156 52.6
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 1.0e-28 131.7 86 72.1
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 3.0e-28 130.2 149 52.3
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 3.8e-23 113.2 140 45.7
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.9e-14 84.3 53 75.5
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 9.5e-14 82.0 89 51.7
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 4.7e-13 79.7 55 61.8
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 2.2e-10 70.9 39 74.4
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 8.3e-10 68.9 42 71.4


User provided reference genes

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