Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 5.3e-113 411.0 200 100.0
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 4.5e-104 381.3 200 94.5
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 1.8e-65 253.1 213 61.0
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 6.5e-63 244.6 231 58.4
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 2.5e-62 242.7 235 56.2
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 4.2e-62 241.9 232 56.9
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 5.5e-62 241.5 231 56.3
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 9.4e-62 240.7 231 55.8
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 1.2e-61 240.4 231 56.7
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 1.6e-61 240.0 235 54.9
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 6.1e-61 238.0 143 76.9
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 6.1e-61 238.0 207 56.0
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 1.4e-60 236.9 231 55.8
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 1.8e-60 236.5 229 54.1
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 1.8e-60 236.5 176 64.2
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 1.8e-60 236.5 234 55.6
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 2.3e-60 236.1 231 55.8
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 3.0e-60 235.7 215 59.1
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 5.2e-60 235.0 235 54.0
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 8.8e-60 234.2 231 54.5
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 2.0e-59 233.0 211 58.3
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.6e-59 232.6 212 57.1
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 2.6e-59 232.6 234 55.6
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 3.3e-59 232.3 232 53.4
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 7.5e-59 231.1 231 55.8
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 7.5e-59 231.1 231 55.4
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.3e-58 230.3 231 54.5
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.7e-58 229.9 231 54.1
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 1.7e-58 229.9 241 55.2
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 2.2e-58 229.6 212 55.7
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 2.8e-58 229.2 218 56.0
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 2.8e-58 229.2 212 55.2
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 4.8e-58 228.4 233 54.9
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 6.3e-58 228.0 186 61.8
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 8.2e-58 227.6 188 60.1
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 1.1e-57 227.3 193 59.6
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 1.4e-57 226.9 211 55.9
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.8e-57 226.5 228 55.3
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 4.1e-57 225.3 234 53.0
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 9.1e-57 224.2 236 54.2
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 1.2e-56 223.8 231 53.7
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 1.2e-56 223.8 233 54.9
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 2.0e-56 223.0 225 56.0
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 2.0e-56 223.0 188 60.1
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 2.7e-56 222.6 231 51.9
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 3.5e-56 222.2 176 63.1
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 3.5e-56 222.2 240 51.2
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 4.5e-56 221.9 231 53.7
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 4.5e-56 221.9 233 48.5
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 5.9e-56 221.5 202 56.9
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 5.9e-56 221.5 235 53.2
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 7.7e-56 221.1 232 52.6
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 1.0e-55 220.7 212 55.2
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 1.0e-55 220.7 227 55.9
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 1.3e-55 220.3 212 57.5
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 1.7e-55 219.9 222 53.6
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 1.7e-55 219.9 233 53.2
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 2.9e-55 219.2 215 54.4
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 8.5e-55 217.6 227 54.2
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 8.5e-55 217.6 177 62.1
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 2.5e-54 216.1 232 52.6
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 2.5e-54 216.1 202 54.5
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 2.5e-54 216.1 202 55.0
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 7.2e-54 214.5 202 54.5
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 1.2e-53 213.8 226 54.4
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 2.1e-53 213.0 213 54.0
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 2.7e-53 212.6 197 56.9
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 3.6e-53 212.2 172 61.6
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 2.3e-52 209.5 206 55.8
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 2.3e-52 209.5 225 51.6
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 5.2e-52 208.4 192 57.3
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 1.5e-51 206.8 180 55.6
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 5.7e-51 204.9 175 58.3
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 1.3e-50 203.8 181 54.7
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 1.7e-50 203.4 193 52.8
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 2.2e-50 203.0 185 58.9
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 1.1e-49 200.7 180 59.4
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 2.4e-49 199.5 179 59.2
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 4.1e-49 198.7 186 57.5
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 4.1e-49 198.7 180 59.4
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 5.4e-49 198.4 180 58.3
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 5.4e-49 198.4 231 50.6
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 1.6e-48 196.8 233 51.5
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 2.0e-48 196.4 168 58.3
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 2.0e-48 196.4 168 58.3
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 3.5e-48 195.7 231 50.2
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 4.5e-48 195.3 232 51.3
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 4.5e-48 195.3 231 52.4
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 7.7e-48 194.5 153 64.1
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 1.3e-47 193.7 231 51.9
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 1.3e-47 193.7 231 52.4
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 6.5e-47 191.4 215 53.5
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 6.5e-47 191.4 171 55.6
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 1.5e-46 190.3 173 54.3
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 3.3e-46 189.1 157 59.2
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 3.6e-45 185.7 187 50.8
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.4e-44 183.7 153 60.8
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 2.3e-44 183.0 231 50.2
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 2.3e-44 183.0 161 57.1
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 8.9e-44 181.0 225 44.9
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 8.9e-44 181.0 155 59.4
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 2.0e-43 179.9 224 48.2
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 2.2e-42 176.4 152 54.6
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 2.9e-39 166.0 193 50.3
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 3.3e-38 162.5 213 47.4
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 1.2e-35 154.1 184 44.0
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 2.0e-35 153.3 255 39.6
Migut.N01635 Erythranthe guttata HOM05D006036 ORTHO05D007736 1.3e-34 150.6 126 59.5
COL.COLO4_12549 Corchorus olitorius HOM05D006036 ORTHO05D007736 2.0e-32 143.3 138 52.2
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 3.0e-31 139.4 232 39.2
Ca_19909_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.9e-30 136.7 97 62.9
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 9.5e-30 134.4 111 61.3
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 9.8e-27 124.4 126 54.0
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 4.9e-26 122.1 112 56.2
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 4.6e-24 115.5 106 54.7
MELO3C034959.2 Cucumis melo HOM05D006036 ORTHO05D007736 9.5e-22 107.8 119 49.6
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 2.8e-21 106.3 175 36.6
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.8e-20 103.6 95 54.7
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 2.3e-20 103.2 113 50.4
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 1.2e-19 100.9 111 48.6
Psat3g116040 Pisum sativum HOM05D006036 ORTHO05D007736 7.5e-19 98.2 108 48.1
Lalb_Chr03g0039551 Lupinus albus HOM05D006036 ORTHO05D007736 3.7e-18 95.9 57 75.4
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 1.4e-17 94.0 53 77.4
Lj1g0011795 Lotus japonicus HOM05D006036 ORTHO05D007736 5.4e-17 92.0 51 78.4
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.2e-16 90.9 54 74.1
arahy.Tifrunner.gnm1.ann1.WD24C8 Arachis hypogaea HOM05D006036 ORTHO05D007736 5.1e-15 85.5 67 59.7
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.4e-12 77.4 41 80.5
arahy.Tifrunner.gnm1.ann1.BW32E7 Arachis hypogaea HOM05D006036 ORTHO05D000587 5.2e-12 75.5 59 61.0
Gorai.007G091200 Gossypium raimondii HOM05D001611 ORTHO05D001464 3.4e-11 72.8 43 74.4
Gohir.D11G085366 Gossypium hirsutum HOM05D001611 ORTHO05D001464 9.9e-11 71.2 43 72.1


User provided reference genes

Program Settings