Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 3.3e-224 781.6 439 100.0
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 2.3e-121 439.9 427 57.1
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 5.2e-121 438.7 338 67.2
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 1.3e-119 434.1 338 67.2
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.7e-119 433.7 422 63.7
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 2.8e-119 433.0 338 66.9
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 5.3e-118 428.7 353 71.4
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 9.1e-118 427.9 420 63.8
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 2.0e-117 426.8 343 75.8
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 3.5e-117 426.0 421 58.7
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 4.5e-117 425.6 420 56.2
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 4.5e-117 425.6 437 58.4
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 7.7e-117 424.9 421 64.8
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 2.9e-116 422.9 334 76.3
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 6.5e-116 421.8 445 54.8
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 6.5e-116 421.8 336 66.4
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.5e-115 420.6 335 75.2
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 5.5e-115 418.7 419 64.4
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 5.5e-115 418.7 440 54.5
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 9.4e-115 417.9 424 65.6
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 1.2e-114 417.5 335 71.3
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 1.2e-114 417.5 347 73.5
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 1.6e-114 417.2 428 58.4
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.1e-114 416.8 432 62.7
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 2.1e-114 416.8 436 62.8
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 8.0e-114 414.8 344 73.8
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 1.4e-113 414.1 330 75.5
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.4e-113 414.1 343 73.5
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 4.0e-113 412.5 453 60.3
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 4.0e-113 412.5 345 72.8
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 5.2e-113 412.1 339 73.5
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 6.8e-113 411.8 428 63.1
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 1.2e-112 411.0 410 64.6
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.0e-112 410.2 442 62.7
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 2.0e-112 410.2 335 67.2
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 4.4e-112 409.1 336 68.2
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 4.4e-112 409.1 401 66.3
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 5.7e-112 408.7 349 71.3
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 7.5e-112 408.3 341 73.9
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 1.7e-111 407.1 430 61.9
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 2.8e-111 406.4 431 58.7
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 4.8e-111 405.6 335 72.2
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 4.8e-111 405.6 334 72.8
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 6.3e-111 405.2 434 59.9
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 1.2e-109 401.0 340 68.2
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 1.6e-109 400.6 332 71.1
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 2.0e-109 400.2 347 60.2
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 2.7e-109 399.8 346 60.7
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 4.5e-109 399.1 435 60.5
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 1.0e-108 397.9 337 63.5
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 5.0e-108 395.6 428 57.5
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 6.6e-108 395.2 335 71.0
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 8.6e-108 394.8 440 57.0
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 8.6e-108 394.8 354 68.4
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.1e-107 394.4 343 68.8
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 1.1e-107 394.4 343 71.7
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 4.2e-107 392.5 340 64.1
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 7.2e-107 391.7 434 60.6
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 9.5e-107 391.3 350 62.6
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 1.2e-106 391.0 343 67.6
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 1.6e-106 390.6 451 58.5
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 2.8e-106 389.8 326 65.0
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 3.6e-106 389.4 343 60.1
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 3.6e-106 389.4 387 55.6
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 8.0e-106 388.3 330 67.6
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 1.0e-105 387.9 344 67.4
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 1.4e-105 387.5 343 67.3
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.2e-104 384.4 344 67.4
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.5e-104 384.0 436 57.6
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 2.0e-104 383.6 345 61.7
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.0e-104 383.6 351 67.2
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.7e-104 382.1 351 67.2
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.5e-104 381.7 437 57.4
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 1.3e-103 380.9 336 61.3
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 2.2e-103 380.2 341 63.3
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 3.7e-103 379.4 450 51.8
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 6.3e-103 378.6 341 60.1
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 1.4e-102 377.5 353 63.5
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 1.8e-102 377.1 339 67.8
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 1.8e-102 377.1 355 64.5
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 2.4e-102 376.7 341 66.6
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 2.4e-102 376.7 349 66.8
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 3.2e-102 376.3 347 66.9
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 3.2e-102 376.3 347 66.9
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 3.2e-102 376.3 347 66.9
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 7.0e-102 375.2 356 65.7
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 9.2e-102 374.8 343 68.5
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.2e-101 374.4 356 65.4
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 1.6e-101 374.0 397 52.6
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 5.9e-101 372.1 351 62.4
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 5.9e-101 372.1 351 62.4
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 7.8e-101 371.7 353 61.2
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 7.8e-101 371.7 357 62.7
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 7.8e-101 371.7 357 62.7
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 1.0e-100 371.3 346 65.0
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 1.7e-100 370.5 351 66.1
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 1.7e-100 370.5 351 66.1
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 2.3e-100 370.2 349 65.9
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 8.6e-100 368.2 313 72.8
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 1.5e-99 367.5 371 59.0
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 7.3e-99 365.2 378 54.8
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 9.5e-99 364.8 365 61.4
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 8.0e-98 361.7 371 62.0
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 1.8e-97 360.5 332 62.3
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 2.3e-97 360.1 355 64.5
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 3.1e-97 359.8 307 67.4
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 2.6e-96 356.7 294 75.9
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 3.4e-96 356.3 336 56.8
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 2.9e-95 353.2 324 61.1
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 1.9e-94 350.5 351 63.0
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.9e-94 350.5 351 63.0
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.5e-93 346.3 355 58.3
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 8.0e-90 335.1 351 51.0
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 6.8e-89 332.0 371 57.7
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 1.2e-85 321.2 369 50.4
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 3.5e-85 319.7 355 56.6
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 2.6e-80 303.5 321 57.0
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 3.2e-78 296.6 342 47.4
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 3.0e-76 290.0 332 50.9
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.9e-75 287.3 345 49.0
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 2.5e-75 287.0 169 80.5
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 4.3e-75 286.2 345 49.3
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 4.3e-75 286.2 331 46.8
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.5e-72 277.7 158 81.6
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 3.4e-72 276.6 326 45.7
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 2.7e-69 266.9 306 48.4
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 2.3e-68 263.8 299 59.2
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 3.6e-58 229.9 229 70.3
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.3e-55 221.5 301 56.5
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 8.4e-55 218.8 137 77.4
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 1.1e-51 208.4 237 64.1
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 7.6e-48 195.7 117 82.1
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 4.9e-47 193.0 114 78.9
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 9.6e-43 178.7 113 72.6
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.4e-38 164.9 251 54.6
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 2.5e-38 164.1 309 39.2
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 2.3e-36 157.5 326 35.0
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 5.7e-35 152.9 96 74.0
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 2.6e-32 144.1 197 45.7
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 4.3e-27 126.7 263 33.8
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 2.9e-23 114.0 101 56.4
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 2.3e-20 104.4 64 75.0
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 6.1e-13 79.7 111 42.3
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.5e-11 75.1 73 45.2


User provided reference genes

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