Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1877 Papaver somniferum HOM05D006007 ORTHO05D007518 0.0e+00 1107.8 604 100.0
PSO017G6380 Papaver somniferum HOM05D006007 ORTHO05D007518 2.8e-295 1018.1 605 93.4
TAR264G0002 Trochodendron aralioides HOM05D006007 ORTHO05D007518 2.7e-184 649.4 620 61.8
Nn4g23426 Nelumbo nucifera HOM05D006007 ORTHO05D007518 8.9e-164 581.3 626 57.7
GSVIVG01032902001 Vitis vinifera HOM05D006007 ORTHO05D007518 2.6e-155 553.1 619 57.5
Dinv34943 Davidia involucrata HOM05D006007 ORTHO05D007518 4.1e-153 545.8 490 63.9
QL02p067640 Quercus lobata HOM05D006007 ORTHO05D007518 1.2e-149 534.3 649 54.4
CSS0026219 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 3.1e-148 529.6 618 54.0
Cfa007665 Carpinus fangiana HOM05D006007 ORTHO05D007518 3.1e-148 529.6 616 55.0
CSS0007202 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 2.6e-147 526.6 618 54.0
Aqoxy3G03693 Aquilegia oxysepala HOM05D006007 ORTHO05D007518 1.3e-143 514.2 614 56.5
RcHm_v2.0_Chr2g0165881 Rosa chinensis HOM05D006007 ORTHO05D007518 1.3e-143 514.2 630 54.0
Potri.017G093600 Populus trichocarpa HOM05D006007 ORTHO05D007518 5.1e-143 512.3 617 54.3
Duzib264G0491 Durio zibethinus HOM05D006007 ORTHO05D007518 8.6e-143 511.5 618 54.0
Atru.chr8.458 Acer truncatum HOM05D006007 ORTHO05D007518 3.3e-142 509.6 610 53.0
Cc07_g04190 Coffea canephora HOM05D006007 ORTHO05D007518 5.6e-142 508.8 617 51.4
Manes.02G054700 Manihot esculenta HOM05D006007 ORTHO05D007518 2.8e-141 506.5 644 52.8
CiPaw.03G088800 Carya illinoinensis HOM05D006007 ORTHO05D007518 4.0e-140 502.7 633 53.1
Gohir.A11G072800 Gossypium hirsutum HOM05D006007 ORTHO05D007518 5.2e-140 502.3 635 54.5
Gorai.007G082800 Gossypium raimondii HOM05D006007 ORTHO05D007518 6.8e-140 501.9 636 52.4
Haze_14433 Corylus avellana HOM05D006007 ORTHO05D007518 1.2e-139 501.1 681 49.3
CDE02G4269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 3.4e-139 499.6 612 51.8
Sabra17G0082500 Salix brachista HOM05D006007 ORTHO05D007518 9.9e-139 498.0 620 53.4
Gohir.D11G077100 Gossypium hirsutum HOM05D006007 ORTHO05D007518 4.9e-138 495.7 636 51.9
FvH4_6g46910 Fragaria vesca HOM05D006007 ORTHO05D007518 8.4e-138 495.0 632 52.5
FAN09G0451 Fragaria x ananassa HOM05D006007 ORTHO05D007518 8.4e-138 495.0 632 51.7
CiPaw.04G055900 Carya illinoinensis HOM05D006007 ORTHO05D007518 1.9e-137 493.8 470 61.3
Thecc.04G095300 Theobroma cacao HOM05D006007 ORTHO05D007518 5.4e-137 492.3 612 53.6
FAN05G3222 Fragaria x ananassa HOM05D006007 ORTHO05D007518 9.2e-137 491.5 646 50.5
CANSAT64G1701 Cannabis sativa HOM05D006007 ORTHO05D007518 6.0e-136 488.8 637 53.1
Ciclev10011374m.g Citrus clementina HOM05D006007 ORTHO05D007518 6.0e-136 488.8 579 55.6
FAN02G0083 Fragaria x ananassa HOM05D006007 ORTHO05D007518 8.1e-133 478.4 646 50.6
Prupe.3G255200 Prunus persica HOM05D006007 ORTHO05D007518 1.5e-131 474.2 499 58.5
FAN14G4567 Fragaria x ananassa HOM05D006007 ORTHO05D007518 2.0e-131 473.8 661 50.4
Glyma.18G266400 Glycine max HOM05D006007 ORTHO05D007518 1.1e-129 468.0 660 50.2
vmacro05632 Vaccinium macrocarpon HOM05D006007 ORTHO05D007518 1.1e-129 468.0 622 51.8
TWI32G0586 Tripterygium wilfordii HOM05D006007 ORTHO05D007518 1.9e-129 467.2 592 53.5
FAN05G2596 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.6e-128 464.2 491 57.4
Nitab4.5_0000212g0230 Nicotiana tabacum HOM05D006007 ORTHO05D007518 6.0e-128 462.2 609 50.4
Solyc02g066940.4 Solanum lycopersicum HOM05D006007 ORTHO05D007518 1.0e-127 461.5 608 50.8
ATR0177G014 Amborella trichopoda HOM05D006007 ORTHO05D007518 1.1e-126 458.0 639 46.2
PGSC0003DMG400025145 Solanum tuberosum HOM05D006007 ORTHO05D007518 1.5e-126 457.6 608 50.2
MSTRG.23885 Avicennia marina HOM05D006007 ORTHO05D007518 1.9e-126 457.2 576 49.7
COL.COLO4_07027 Corchorus olitorius HOM05D006007 ORTHO05D007518 7.3e-126 455.3 484 56.4
Aa31LG2G3900 Aethionema arabicum HOM05D006007 ORTHO05D007518 8.1e-125 451.8 484 55.6
A02p36640 Brassica napus HOM05D006007 ORTHO05D007518 2.4e-124 450.3 579 53.7
Ca_04352_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 4.0e-124 449.5 691 48.0
BraA02t08659Z Brassica rapa HOM05D006007 ORTHO05D007518 9.0e-124 448.4 579 53.5
HPP92_007829 Vanilla planifolia HOM05D006007 ORTHO05D007518 1.2e-123 448.0 502 54.2
Sopen02g016130 Solanum pennellii HOM05D006007 ORTHO05D007518 2.6e-123 446.8 479 55.9
CAN.G398.20 Capsicum annuum HOM05D006007 ORTHO05D007518 1.7e-122 444.1 614 49.3
Thhalv10003901m.g Eutrema salsugineum HOM05D006007 ORTHO05D007518 2.2e-122 443.7 584 51.2
THA.LOC104823889 Tarenaya hassleriana HOM05D006007 ORTHO05D007518 2.9e-122 443.4 613 51.2
Medtr7g013700 Medicago truncatula HOM05D006007 ORTHO05D007518 8.4e-122 441.8 634 48.7
Lalb_Chr17g0337001 Lupinus albus HOM05D006007 ORTHO05D007518 1.1e-121 441.4 653 48.9
EL10Ac2g03139 Beta vulgaris HOM05D006007 ORTHO05D007518 1.4e-121 441.0 626 49.4
BcaB07g30079 Brassica carinata HOM05D006007 ORTHO05D007518 2.4e-121 440.3 584 53.4
Sp2g17990 Schrenkiella parvula HOM05D006007 ORTHO05D007518 2.4e-121 440.3 583 55.1
Glyma.08G245100 Glycine max HOM05D006007 ORTHO05D007518 5.4e-121 439.1 518 54.4
Lj1g0023913 Lotus japonicus HOM05D006007 ORTHO05D007518 7.1e-121 438.7 647 50.5
Phvul.008G033600 Phaseolus vulgaris HOM05D006007 ORTHO05D007518 2.7e-120 436.8 622 49.2
Ca_30479_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 3.5e-120 436.4 530 52.6
Hund15552 Selenicereus undatus HOM05D006007 ORTHO05D007518 7.9e-120 435.3 500 55.2
Zm00001eb008620 Zea mays HOM05D006007 ORTHO05D007518 5.1e-119 432.6 502 52.4
HanXRQChr17g0546081 Helianthus annuus HOM05D006007 ORTHO05D007518 8.7e-119 431.8 601 52.7
C02p55600 Brassica napus HOM05D006007 ORTHO05D007518 1.1e-118 431.4 587 53.2
BolC2t11616H Brassica oleracea HOM05D006007 ORTHO05D007518 1.1e-118 431.4 587 53.2
AUR62018183 Chenopodium quinoa HOM05D006007 ORTHO05D007518 1.9e-118 430.6 492 54.7
Cpa.g.sc14.172 Carica papaya HOM05D006007 ORTHO05D007518 2.5e-118 430.3 395 64.3
BcaC03g17580 Brassica carinata HOM05D006007 ORTHO05D007518 4.3e-118 429.5 587 53.0
Migut.H00628 Erythranthe guttata HOM05D006007 ORTHO05D007518 4.3e-118 429.5 473 55.2
Peaxi162Scf00991g00329 Petunia axillaris HOM05D006007 ORTHO05D007518 4.8e-117 426.0 467 54.6
SalBow1G7079 Salvia bowleyana HOM05D006007 ORTHO05D007518 6.9e-116 422.2 468 54.9
DCAR_005549 Daucus carota HOM05D006007 ORTHO05D007518 1.5e-115 421.0 595 48.1
Lj4A118G52 Lonicera japonica HOM05D006007 ORTHO05D007518 1.5e-115 421.0 606 47.0
Oeu004412.3 Olea europaea HOM05D006007 ORTHO05D007518 5.8e-115 419.1 691 45.2
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea HOM05D006007 ORTHO05D007518 3.2e-113 413.3 512 52.5
Ah.10g032260 Amaranthus hybridus HOM05D006007 ORTHO05D007518 4.2e-113 412.9 491 53.0
AT3G29390 Arabidopsis thaliana HOM05D006007 ORTHO05D007518 9.3e-113 411.8 473 53.3
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea HOM05D006007 ORTHO05D007518 1.6e-112 411.0 512 52.3
Carub.0005s0814 Capsella rubella HOM05D006007 ORTHO05D007518 1.6e-112 411.0 598 51.2
Rhsim10G0048800 Rhododendron simsii HOM05D006007 ORTHO05D007518 3.0e-111 406.8 616 45.0
ECA246G0757 Erigeron canadensis HOM05D006007 ORTHO05D007518 3.3e-110 403.3 589 48.6
AL5G19590 Arabidopsis lyrata HOM05D006007 ORTHO05D007518 9.6e-110 401.7 478 52.9
Sed0005820 Sechium edule HOM05D006007 ORTHO05D007518 3.7e-109 399.8 635 44.7
MELO3C022635.2 Cucumis melo HOM05D006007 ORTHO05D007518 2.4e-108 397.1 662 43.8
PGR004G1158 Punica granatum HOM05D006007 ORTHO05D007518 4.0e-108 396.4 479 51.6
unitig_52.g17640 Utricularia gibba HOM05D006007 ORTHO05D007518 7.6e-107 392.1 587 47.7
CsaV3_4G009190 Cucumis sativus L. HOM05D006007 ORTHO05D007518 1.6e-104 384.4 511 51.7
ClCG07G016350 Citrullus lanatus HOM05D006007 ORTHO05D007518 1.5e-102 377.9 523 49.5
SEGI_40404 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 4.8e-101 372.9 616 42.2
AUR62038668 Chenopodium quinoa HOM05D006007 ORTHO05D007518 1.4e-95 354.8 388 57.0
MBI19_g00631_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 5.1e-95 352.8 260 70.8
Psat3g201920 Pisum sativum HOM05D006007 ORTHO05D007518 1.1e-94 351.7 393 54.7
Lsat_1_v5_gn_3_97780 Lactuca sativa HOM05D006007 ORTHO05D007518 2.5e-94 350.5 608 41.6
Nitab4.5_0010627g0030 Nicotiana tabacum HOM05D006007 ORTHO05D007518 1.5e-91 341.3 609 43.2
HPP92_007749 Vanilla planifolia HOM05D006007 ORTHO05D007518 1.2e-83 315.1 288 60.4
Mapoly0218s0012 Marchantia polymorpha HOM05D006007 ORTHO05D007518 2.0e-83 314.3 603 40.3
TPR.G33475 Trifolium pratense HOM05D006007 ORTHO05D007518 8.8e-79 298.9 233 69.1
Hma1.2p1_0481F.1_g162150 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 8.2e-77 292.4 404 51.7
Hma1.2p1_0481F.1_g162140 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 3.1e-76 290.4 403 51.6
Eucgr.J01380 Eucalyptus grandis HOM05D006007 ORTHO05D007518 1.2e-75 288.5 433 52.9
MD09G1066300 Malus domestica HOM05D006007 ORTHO05D007518 3.2e-65 253.8 231 61.9
Pp3c3_22820 Physcomitrium patens HOM05D006007 ORTHO05D007518 4.7e-64 250.0 414 41.8
Sc10g0004660 Simmondsia chinensis HOM05D006007 ORTHO05D007518 2.2e-61 241.1 239 59.0
MD09G1066400 Malus domestica HOM05D006007 ORTHO05D007518 2.5e-57 227.6 377 48.8
CDE05G1269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 2.8e-56 224.2 231 57.1
CBR_g19543 Chara braunii HOM05D006007 ORTHO05D007518 3.0e-55 220.7 433 37.9
MBI19_g00630_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 5.2e-55 219.9 377 49.6
Sc10g0004670 Simmondsia chinensis HOM05D006007 ORTHO05D007518 3.1e-47 194.1 375 41.3
Hma1.2p1_0481F.1_g162130 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 3.2e-44 184.1 171 59.1
Os03g0213900 Oryza sativa ssp. japonica HOM05D006007 ORTHO05D007518 1.1e-39 169.1 172 55.8
SEGI_00365 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 3.7e-37 160.6 129 62.8
Oeu051018.1 Olea europaea HOM05D006007 ORTHO05D007518 9.2e-36 156.0 236 47.9
SHI25685 Sapria himalayana HOM05D006007 ORTHO05D007518 8.6e-34 149.4 142 57.0
BraA09t36042Z Brassica rapa HOM05D006007 ORTHO05D007518 1.8e-31 141.7 108 69.4
A09p04060 Brassica napus HOM05D006007 ORTHO05D010543 3.4e-30 137.5 108 68.5
CDE05G3437 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 9.9e-30 136.0 227 41.0
SHI25684 Sapria himalayana HOM05D006007 ORTHO05D007518 1.6e-27 128.6 161 48.4
Cre09.g389900 Chlamydomonas reinhardtii HOM05D006007 ORTHO05D007518 6.2e-24 116.7 359 29.8
BcaC03g17562 Brassica carinata HOM05D006007 ORTHO05D007518 4.4e-22 110.5 229 38.9
MBI15_g14467_MAGBIO Magnolia biondii HOM05D003623 ORTHO05D007518 7.1e-20 103.2 188 41.5
BolC2t11584H Brassica oleracea HOM05D006007 ORTHO05D007518 4.8e-16 90.5 70 68.6
HPP92_007750 Vanilla planifolia HOM05D006007 ORTHO05D007518 6.9e-15 86.7 113 49.6
CARHR153030 Cardamine hirsuta HOM05D006007 ORTHO05D007518 2.3e-10 71.6 73 54.8
SGA_v2.0_scaffold126G33886 Striga asiatica HOM05D000032 ORTHO05D005217 8.1e-08 63.2 135 32.6
Ciclev10004206m.g Citrus clementina HOM05D000032 ORTHO05D005217 2.6e-06 58.2 130 33.1
Atru.chr13.40 Acer truncatum HOM05D000032 ORTHO05D005217 9.9e-06 56.2 111 35.1
Cpa.g.sc14.174 Carica papaya HOM05D006007 ORTHO05D007518 9.9e-06 56.2 95 36.8


User provided reference genes

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